UBERON:0010133: Difference between revisions
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{{UBERON | {{UBERON | ||
| | |alt_id= | ||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
| | |def= | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
|disjoint_from= | |||
|has_quality= | |has_quality= | ||
|id=UBERON:0010133 | |||
|is_a=UBERON:0002368 | |||
|is_obsolete= | |||
|located_in= | |located_in= | ||
|name=neuroendocrine gland | |||
|namespace=FANTOM | |||
|obo_creation_date= | |||
|part_of=UBERON:0001016 | |part_of=UBERON:0001016 | ||
|preceded_by= | |||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
| | |subset= | ||
| | |synonym= | ||
|union_of= | |||
|xref=MA:0000720 | |||
}} | }} | ||
Latest revision as of 18:08, 12 September 2014
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0002368(endocrine gland) |
|---|---|
| part_of: | UBERON:0001016(nervous system) |
Children
| is a: | UBERON:0000007 (pituitary gland),UBERON:0010134 (secretory circumventricular organ) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10160-103A7 (pineal gland, adult, donor10252)
- 10162-103A9 (pituitary gland, adult, donor10252)
- 10179-103C8 (pineal gland - adult, donor10196)
- 10180-103C9 (pituitary gland - adult, donor10196)
- 10377-105G8 (pineal gland, adult, donor10258)
- 10378-105G9 (pituitary gland, adult, donor10258)
- 11649-122E2
- 11726-123D7
- 11744-123F7
- 1265-44F5 (pituitary gland, embryo E17)
... further results Mouse (Mus musculus)
- 10160-103A7 (pineal gland, adult, donor10252)
- 10162-103A9 (pituitary gland, adult, donor10252)
- 10179-103C8 (pineal gland - adult, donor10196)
- 10180-103C9 (pituitary gland - adult, donor10196)
- 10377-105G8 (pineal gland, adult, donor10258)
- 10378-105G9 (pituitary gland, adult, donor10258)
- 11649-122E2
- 11726-123D7
- 11744-123F7
- 1265-44F5 (pituitary gland, embryo E17)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0010133 (neuroendocrine gland), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 2.57e-195 | FFCP PHASE1:Hg19::chr19:7979708..7979734,+#_f13cd36ed01f3db2171f12b6116a6ff9 | p@chr19:7979708..7979734, + |
| 2.57e-195 | FFCP PHASE2:Hg19::chr19:7979708..7979734,+#_f13cd36ed01f3db2171f12b6116a6ff9 | p@chr19:7979708..7979734, + |
| 1.0e-156 | FFCP PHASE2:Hg19::chr5:136328571..136328599,-#_5514584a7e1112c80965a17d50ebf3f8 | p11@SPOCK1 |
| 1.0e-156 | FFCP PHASE1:Hg19::chr5:136328571..136328599,-#_5514584a7e1112c80965a17d50ebf3f8 | p11@SPOCK1 |
| 1.5e-156 | FFCP PHASE2:Hg19::chr12:128210626..128210641,-#_cfc62a643d1f2213b7a2455041210e56 | p@chr12:128210626..128210641, - |
| 1.5e-156 | FFCP PHASE1:Hg19::chr12:128210626..128210641,-#_cfc62a643d1f2213b7a2455041210e56 | p@chr12:128210626..128210641, - |
| 6.94e-147 | FFCP PHASE2:Hg19::chr19:7979677..7979703,+#_439b5ab41632d127d66fbe369abc022d | p@chr19:7979677..7979703, + |
| 6.94e-147 | FFCP PHASE1:Hg19::chr19:49519930..49519937,-#_439b5ab41632d127d66fbe369abc022d | p@chr19:49519930..49519937, - |
| 6.94e-147 | FFCP PHASE1:Hg19::chr19:7979644..7979653,+#_439b5ab41632d127d66fbe369abc022d | p@chr19:7979644..7979653, + |
| 6.94e-147 | FFCP PHASE1:Hg19::chr19:49520344..49520367,-#_439b5ab41632d127d66fbe369abc022d | p1@LHB |
| 6.94e-147 | FFCP PHASE2:Hg19::chr19:49519930..49519937,-#_439b5ab41632d127d66fbe369abc022d | p@chr19:49519930..49519937, - |
| 6.94e-147 | FFCP PHASE2:Hg19::chr19:7979644..7979653,+#_439b5ab41632d127d66fbe369abc022d | p@chr19:7979644..7979653, + |
| 6.94e-147 | FFCP PHASE1:Hg19::chr19:7979677..7979703,+#_439b5ab41632d127d66fbe369abc022d | p@chr19:7979677..7979703, + |
| 6.94e-147 | FFCP PHASE2:Hg19::chr19:49520344..49520367,-#_439b5ab41632d127d66fbe369abc022d | p1@LHB |
| 2.79e-131 | FFCP PHASE1:Hg19::chr1:99693441..99693485,-#_fcc32c2376aa500a242e848747009898 | p@chr1:99693441..99693485, - |
| 2.79e-131 | FFCP PHASE2:Hg19::chr1:99693441..99693485,-#_fcc32c2376aa500a242e848747009898 | p@chr1:99693441..99693485, - |
| 1.07e-130 | FFCP PHASE2:Hg19::chr5:133772179..133772191,+#_bc3de8f58559da33a88b004fc6e94030 | p5@ENST00000513329 |
| 1.07e-130 | FFCP PHASE1:Hg19::chr5:133772179..133772191,+#_bc3de8f58559da33a88b004fc6e94030 | p5@ENST00000513329 |
| 1.0e-112 | FFCP PHASE1:Hg19::chr5:141783725..141783734,+#_d8bb02656b15580ecfe68c419d3ff8df | p3@ENST00000443800 |
| 1.0e-112 | FFCP PHASE2:Hg19::chr5:141783725..141783734,+#_d8bb02656b15580ecfe68c419d3ff8df | p3@ENST00000443800 |
| 1.76e-111 | FFCP PHASE2:Hg19::chr9:139096968..139096979,-#_924e67058d0974468325bc0c706a87e9 | p2@LHX3 |
| 1.76e-111 | FFCP PHASE1:Hg19::chr9:139096968..139096979,-#_924e67058d0974468325bc0c706a87e9 | p2@LHX3 |
| 8.91e-111 | FFCP PHASE1:Hg19::chr22:47126639..47126654,+#_3171f7569b31dd41dcf17597798614a4 | p@chr22:47126639..47126654, + |
| 8.91e-111 | FFCP PHASE2:Hg19::chr22:47126639..47126654,+#_3171f7569b31dd41dcf17597798614a4 | p@chr22:47126639..47126654, + |
| 2.76e-110 | FFCP PHASE1:Hg19::chr4:1233005..1233017,+#_37a84fd160266237ee3bcd87757f3841 | p@chr4:1233005..1233017, + |
| 2.76e-110 | FFCP PHASE2:Hg19::chr4:1233005..1233017,+#_37a84fd160266237ee3bcd87757f3841 | p@chr4:1233005..1233017, + |
| 2.76e-110 | FFCP PHASE2:Hg19::chr15:71228905..71228915,+#_37a84fd160266237ee3bcd87757f3841 | p17@LRRC49 |
| 2.76e-110 | FFCP PHASE1:Hg19::chr11:75194071..75194110,-#_37a84fd160266237ee3bcd87757f3841 | p@chr11:75194071..75194110, - |
| 2.76e-110 | FFCP PHASE2:Hg19::chr11:75194071..75194110,-#_37a84fd160266237ee3bcd87757f3841 | p@chr11:75194071..75194110, - |
| 2.76e-110 | FFCP PHASE1:Hg19::chr15:71228905..71228915,+#_37a84fd160266237ee3bcd87757f3841 | p17@LRRC49 |
| 5.02e-99 | FFCP PHASE2:Hg19::chr12:128210666..128210685,-#_8c62d767d42a86007ecf84b7efb7b088 | p@chr12:128210666..128210685, - |
| 5.02e-99 | FFCP PHASE1:Hg19::chr12:128210666..128210685,-#_8c62d767d42a86007ecf84b7efb7b088 | p@chr12:128210666..128210685, - |
| 1.38e-98 | FFCP PHASE2:Hg19::chr9:139095116..139095139,+#_f4da311a38164dc15ff212a45bb07beb | p@chr9:139095116..139095139, + |
| 1.38e-98 | FFCP PHASE1:Hg19::chr9:139095116..139095139,+#_f4da311a38164dc15ff212a45bb07beb | p@chr9:139095116..139095139, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr17:61994760..61994767,+#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr17:61994760..61994767, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr17:61996160..61996176,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p3@GH1 |
| 1.55e-98 | FFCP PHASE1:Hg19::chr6:22287669..22287676,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr6:22287669..22287676, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr1:57914395..57914398,+#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr1:57914395..57914398, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr8:135474173..135474185,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr8:135474173..135474185, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr7:31003560..31003576,+#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p5@GHRHR |
| 1.55e-98 | FFCP PHASE2:Hg19::chr11:74951707..74951719,+#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p9@LOC100507050 |
| 1.55e-98 | FFCP PHASE2:Hg19::chr8:87755821..87755822,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p10@CNGB3 |
| 1.55e-98 | FFCP PHASE2:Hg19::chr8:116085391..116085419,+#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr8:116085391..116085419, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr11:84530787..84530803,+#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr11:84530787..84530803, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr5:119799576..119799585,+#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p10@PRR16 |
| 1.55e-98 | FFCP PHASE2:Hg19::chr9:37692930..37692936,+#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr9:37692930..37692936, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr7:31003621..31003641,+#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p3@GHRHR |
| 1.55e-98 | FFCP PHASE2:Hg19::chr2:17040158..17040170,+#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr2:17040158..17040170, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr1:45782019..45782028,+#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr1:45782019..45782028, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr17:61995432..61995458,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr17:61995432..61995458, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr3:54952462..54952471,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr3:54952462..54952471, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr19:2608406..2608413,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr19:2608406..2608413, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr2:17185712..17185735,+#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr2:17185712..17185735, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr6:22294755..22294768,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p9@PRL |
| 1.55e-98 | FFCP PHASE1:Hg19::chr3:139938385..139938390,+#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr3:139938385..139938390, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr5:7338484..7338504,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr5:7338484..7338504, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr3:54952462..54952471,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr3:54952462..54952471, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr7:36878535..36878540,+#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p4@ENST00000439998 |
| 1.55e-98 | FFCP PHASE2:Hg19::chr2:17185712..17185735,+#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr2:17185712..17185735, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr4:68620100..68620112,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p1@GNRHR |
| 1.55e-98 | FFCP PHASE2:Hg19::chr8:135473472..135473477,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr8:135473472..135473477, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr11:18053180..18053192,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr11:18053180..18053192, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr17:61996018..61996019,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p5@AB591020 |
| 1.55e-98 | FFCP PHASE1:Hg19::chr20:44991864..44991887,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p10@SLC35C2 |
| 1.55e-98 | FFCP PHASE2:Hg19::chr14:49512240..49512248,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr14:49512240..49512248, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr16:18036005..18036011,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr16:18036005..18036011, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr16:18066399..18066411,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr16:18066399..18066411, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr12:89881337..89881342,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr12:89881337..89881342, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr11:18053180..18053192,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr11:18053180..18053192, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr7:9202487..9202498,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr7:9202487..9202498, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr11:18067904..18067908,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr11:18067904..18067908, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr17:61995371..61995384,+#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr17:61995371..61995384, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr7:129084265..129084288,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr7:129084265..129084288, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr5:119867229..119867240,+#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p9@PRR16 |
| 1.55e-98 | FFCP PHASE2:Hg19::chr8:135504314..135504320,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr8:135504314..135504320, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr7:31006831..31006834,+#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr7:31006831..31006834, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr9:75733141..75733143,+#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr9:75733141..75733143, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr6:22287710..22287718,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr6:22287710..22287718, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr20:58401898..58401905,+#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr20:58401898..58401905, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr16:17930871..17930877,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr16:17930871..17930877, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr5:134871183..134871197,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p3@NEUROG1 |
| 1.55e-98 | FFCP PHASE2:Hg19::chr3:139938385..139938390,+#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr3:139938385..139938390, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr7:9178350..9178369,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr7:9178350..9178369, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr4:68620100..68620112,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p1@GNRHR |
| 1.55e-98 | FFCP PHASE1:Hg19::chr8:135504405..135504410,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr8:135504405..135504410, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr19:49519519..49519562,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p2@CU678753 |
| 1.55e-98 | FFCP PHASE1:Hg19::chr8:87751931..87751947,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr8:87751931..87751947, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr1:154540028..154540037,+#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p4@CHRNB2 |
| 1.55e-98 | FFCP PHASE1:Hg19::chr17:61995979..61995990,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p2@AB591020 |
| 1.55e-98 | FFCP PHASE1:Hg19::chr4:20985967..20985972,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p28@KCNIP4 |
| 1.55e-98 | FFCP PHASE1:Hg19::chr9:37668094..37668097,+#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p6@FRMPD1 |
| 1.55e-98 | FFCP PHASE2:Hg19::chr9:75733141..75733143,+#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr9:75733141..75733143, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr8:135473983..135473986,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr8:135473983..135473986, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr13:52650541..52650548,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr13:52650541..52650548, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr8:99033409..99033415,+#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p16@MATN2 |
| 1.55e-98 | FFCP PHASE1:Hg19::chr17:55484129..55484139,+#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr17:55484129..55484139, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr6:158734173..158734183,+#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p7@TULP4 |
| 1.55e-98 | FFCP PHASE2:Hg19::chr20:58401898..58401905,+#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr20:58401898..58401905, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr13:56628548..56628553,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr13:56628548..56628553, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr8:130017368..130017390,+#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr8:130017368..130017390, + |
