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{{UBERON
{{UBERON
|id=UBERON:0005913
|alt_id=
|name=zone of bone organ
|namespace=
|def=
|xref=FMA:10483
|is_a=UBERON:0000064;;UBERON:0004765
|synonym="bone organ zone" EXACT [FMA:10483]
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def=
|subset=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=UBERON:0005913
|is_a=UBERON:0000064
|is_obsolete=
|located_in=
|located_in=
|name=zone of bone organ
|namespace=FANTOM
|obo_creation_date=
|part_of=UBERON:0001474
|part_of=UBERON:0001474
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym="bone organ zone" EXACT [FMA:10483]
|union_of=
|xref=FMA:10483
}}
}}

Latest revision as of 17:55, 12 September 2014

Name:zone of bone organ
Namespace:FANTOM
Xrefs:
links:
FMA:10483
Synonyms: "bone organ zone" EXACT [FMA:10483]

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0000064(organ part)
part_of:UBERON:0001474(bone element)



Children

is a:UBERON:0001694 (petrous part of temporal bone)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

Mouse (Mus musculus)

  • 12157-128G6 (Sox2+ Supporting cells - organ of corti, pool1)
  • 12158-128G7 (Atoh+ Inner ear hair cells - organ of corti, pool1)
  • 12215-129E1 (Inner ear stem cells, 1st generation stem cells, pool1)
  • 12216-129E2 (Inner ear stem cells, 4th generation stem cells, pool1)
  • 12217-129E3 (Inner ear stem cells, differentiation, day03, pool1)
  • 12218-129E4 (Inner ear stem cells, differentiation, day10, pool1)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0005913 (zone of bone organ), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
1.87e-86FFCP PHASE2:Mm9::chr6:113251606..113251613,+#_7b6f029a0160898c16bcaba809565328p@chr6:113251606..113251613, +
1.87e-86FFCP PHASE2:Mm9::chr2:170417150..170417155,-#_7b6f029a0160898c16bcaba809565328p@chr2:170417150..170417155, -
1.87e-86FFCP PHASE2:Mm9::chr18:66033526..66033539,-#_7b6f029a0160898c16bcaba809565328p@chr18:66033526..66033539, -
1.87e-86FFCP PHASE2:Mm9::chr14:31283085..31283097,-#_7b6f029a0160898c16bcaba809565328p@chr14:31283085..31283097, -
1.87e-86FFCP PHASE2:Mm9::chr7:29733825..29733837,-#_7b6f029a0160898c16bcaba809565328p@chr7:29733825..29733837, -
1.87e-86FFCP PHASE2:Mm9::chr3:69811590..69811601,+#_7b6f029a0160898c16bcaba809565328p1@Otol1
1.87e-86FFCP PHASE2:Mm9::chr19:22767090..22767099,+#_7b6f029a0160898c16bcaba809565328p18@Trpm3
1.87e-86FFCP PHASE2:Mm9::chr18:81314626..81314636,+#_7b6f029a0160898c16bcaba809565328p@chr18:81314626..81314636, +
1.87e-86FFCP PHASE2:Mm9::chr2:75320183..75320189,+#_7b6f029a0160898c16bcaba809565328p@chr2:75320183..75320189, +
1.87e-86FFCP PHASE1:Mm9::chr13:76964459..76964469,+#_7b6f029a0160898c16bcaba809565328p15@Mctp1
1.87e-86FFCP PHASE1:Mm9::chr1:60561636..60561645,-#_7b6f029a0160898c16bcaba809565328p@chr1:60561636..60561645, -
1.87e-86FFCP PHASE1:Mm9::chr10:97109753..97109764,+#_7b6f029a0160898c16bcaba809565328p3@Epyc
1.87e-86FFCP PHASE2:Mm9::chr2:121206695..121206711,-#_7b6f029a0160898c16bcaba809565328p1@Strc
1.87e-86FFCP PHASE1:Mm9::chr6:30619443..30619450,-#_7b6f029a0160898c16bcaba809565328p13@Tsga14
1.87e-86FFCP PHASE2:Mm9::chr3:154459231..154459240,+#_7b6f029a0160898c16bcaba809565328p@chr3:154459231..154459240, +
1.87e-86FFCP PHASE2:Mm9::chr2:67011956..67011967,+#_7b6f029a0160898c16bcaba809565328p1@Gm1322
1.87e-86FFCP PHASE2:Mm9::chr9:42207998..42208009,-#_7b6f029a0160898c16bcaba809565328p6@Tecta
1.87e-86FFCP PHASE1:Mm9::chr6:86745686..86745727,-#_7b6f029a0160898c16bcaba809565328p@chr6:86745686..86745727, -
1.87e-86FFCP PHASE1:Mm9::chr16:45693840..45693856,-#_7b6f029a0160898c16bcaba809565328p1@Tmprss7
1.87e-86FFCP PHASE1:Mm9::chr3:69811590..69811601,+#_7b6f029a0160898c16bcaba809565328p1@Otol1
1.87e-86FFCP PHASE2:Mm9::chr16:96494788..96494801,+#_7b6f029a0160898c16bcaba809565328p12@B3galt5
1.87e-86FFCP PHASE2:Mm9::chr12:13508015..13508019,+#_7b6f029a0160898c16bcaba809565328p@chr12:13508015..13508019, +
1.87e-86FFCP PHASE2:Mm9::chr16:45693840..45693856,-#_7b6f029a0160898c16bcaba809565328p1@Tmprss7
1.87e-86FFCP PHASE1:Mm9::chr13:43699228..43699239,+#_7b6f029a0160898c16bcaba809565328p@chr13:43699228..43699239, +
1.87e-86FFCP PHASE2:Mm9::chr9:42207397..42207408,-#_7b6f029a0160898c16bcaba809565328p@chr9:42207397..42207408, -
1.87e-86FFCP PHASE1:Mm9::chr8:125802236..125802251,-#_7b6f029a0160898c16bcaba809565328p3@Fanca
1.87e-86FFCP PHASE1:Mm9::chr2:121206677..121206683,-#_7b6f029a0160898c16bcaba809565328p3@Strc
1.87e-86FFCP PHASE1:Mm9::chr10:107349418..107349423,-#_7b6f029a0160898c16bcaba809565328p5@Otogl
1.87e-86FFCP PHASE1:Mm9::chr9:92087926..92087938,+#_7b6f029a0160898c16bcaba809565328p2@Plscr5
1.87e-86FFCP PHASE1:Mm9::chr12:109905399..109905416,+#_7b6f029a0160898c16bcaba809565328p@chr12:109905399..109905416, +
1.87e-86FFCP PHASE2:Mm9::chrX:154140781..154140788,+#_7b6f029a0160898c16bcaba809565328p@chrX:154140781..154140788, +
1.87e-86FFCP PHASE1:Mm9::chr17:27252925..27252939,+#_7b6f029a0160898c16bcaba809565328p@chr17:27252925..27252939, +
1.87e-86FFCP PHASE1:Mm9::chr1:172843847..172843880,-#_7b6f029a0160898c16bcaba809565328p@chr1:172843847..172843880, -
1.87e-86FFCP PHASE1:Mm9::chr10:80806047..80806059,-#_7b6f029a0160898c16bcaba809565328p4@Gipc3
1.87e-86FFCP PHASE2:Mm9::chr10:107349392..107349413,-#_7b6f029a0160898c16bcaba809565328p2@Otogl
1.87e-86FFCP PHASE1:Mm9::chr9:42207998..42208009,-#_7b6f029a0160898c16bcaba809565328p6@Tecta
1.87e-86FFCP PHASE1:Mm9::chr1:94627290..94627299,-#_7b6f029a0160898c16bcaba809565328p@chr1:94627290..94627299, -
1.87e-86FFCP PHASE2:Mm9::chr13:43699228..43699239,+#_7b6f029a0160898c16bcaba809565328p@chr13:43699228..43699239, +
1.87e-86FFCP PHASE2:Mm9::chr15:58022966..58022995,-#_7b6f029a0160898c16bcaba809565328p@chr15:58022966..58022995, -
1.87e-86FFCP PHASE2:Mm9::chr4:133802857..133802884,+#_7b6f029a0160898c16bcaba809565328p@chr4:133802857..133802884, +
1.87e-86FFCP PHASE1:Mm9::chr3:154459246..154459253,+#_7b6f029a0160898c16bcaba809565328p@chr3:154459246..154459253, +
1.87e-86FFCP PHASE2:Mm9::chr13:78322383..78322395,-#_7b6f029a0160898c16bcaba809565328p2@uc007rhb.1
1.87e-86FFCP PHASE2:Mm9::chr1:182528388..182528403,+#_7b6f029a0160898c16bcaba809565328p@chr1:182528388..182528403, +
1.87e-86FFCP PHASE1:Mm9::chr17:13983160..13983167,+#_7b6f029a0160898c16bcaba809565328p@chr17:13983160..13983167, +
1.87e-86FFCP PHASE1:Mm9::chr9:42207397..42207408,-#_7b6f029a0160898c16bcaba809565328p@chr9:42207397..42207408, -
1.87e-86FFCP PHASE1:Mm9::chr13:78322383..78322395,-#_7b6f029a0160898c16bcaba809565328p2@uc007rhb.1
1.87e-86FFCP PHASE1:Mm9::chr1:78523144..78523177,+#_7b6f029a0160898c16bcaba809565328p@chr1:78523144..78523177, +
1.87e-86FFCP PHASE2:Mm9::chr9:41495920..41495928,-#_7b6f029a0160898c16bcaba809565328p@chr9:41495920..41495928, -
1.87e-86FFCP PHASE1:Mm9::chr4:63079735..63079745,-#_7b6f029a0160898c16bcaba809565328p@chr4:63079735..63079745, -
1.87e-86FFCP PHASE2:Mm9::chr15:65641779..65641790,+#_7b6f029a0160898c16bcaba809565328p@chr15:65641779..65641790, +
1.87e-86FFCP PHASE1:Mm9::chr16:93971357..93971363,-#_7b6f029a0160898c16bcaba809565328p@chr16:93971357..93971363, -
1.87e-86FFCP PHASE1:Mm9::chr5:147854240..147854249,-#_7b6f029a0160898c16bcaba809565328p@chr5:147854240..147854249, -
1.87e-86FFCP PHASE1:Mm9::chr18:42158627..42158630,-#_7b6f029a0160898c16bcaba809565328p@chr18:42158627..42158630, -
1.87e-86FFCP PHASE1:Mm9::chr2:53464168..53464175,+#_7b6f029a0160898c16bcaba809565328p@chr2:53464168..53464175, +
1.87e-86FFCP PHASE2:Mm9::chr8:13425469..13425503,+#_7b6f029a0160898c16bcaba809565328p@chr8:13425469..13425503, +
1.87e-86FFCP PHASE2:Mm9::chr10:80806020..80806031,-#_7b6f029a0160898c16bcaba809565328p3@Gipc3
1.87e-86FFCP PHASE1:Mm9::chr6:29428397..29428407,-#_7b6f029a0160898c16bcaba809565328p@chr6:29428397..29428407, -
1.87e-86FFCP PHASE1:Mm9::chr15:89215319..89215330,+#_7b6f029a0160898c16bcaba809565328p@chr15:89215319..89215330, +
1.87e-86FFCP PHASE1:Mm9::chr13:58283583..58283607,-#_7b6f029a0160898c16bcaba809565328p@chr13:58283583..58283607, -
1.87e-86FFCP PHASE2:Mm9::chr10:67371994..67372010,+#_7b6f029a0160898c16bcaba809565328p@chr10:67371994..67372010, +
1.87e-86FFCP PHASE2:Mm9::chr19:10536767..10536777,-#_7b6f029a0160898c16bcaba809565328p@chr19:10536767..10536777, -
1.87e-86FFCP PHASE2:Mm9::chr9:42207852..42207876,-#_7b6f029a0160898c16bcaba809565328p2@Tecta
1.87e-86FFCP PHASE1:Mm9::chr8:13425469..13425503,+#_7b6f029a0160898c16bcaba809565328p@chr8:13425469..13425503, +
1.87e-86FFCP PHASE1:Mm9::chr19:55255289..55255299,+#_7b6f029a0160898c16bcaba809565328p2@Tectb
1.87e-86FFCP PHASE2:Mm9::chr15:89215333..89215341,+#_7b6f029a0160898c16bcaba809565328p@chr15:89215333..89215341, +
1.87e-86FFCP PHASE1:Mm9::chr12:13508015..13508019,+#_7b6f029a0160898c16bcaba809565328p@chr12:13508015..13508019, +
1.87e-86FFCP PHASE2:Mm9::chr3:31585340..31585360,+#_7b6f029a0160898c16bcaba809565328p@chr3:31585340..31585360, +
1.87e-86FFCP PHASE2:Mm9::chr1:172843796..172843799,-#_7b6f029a0160898c16bcaba809565328p@chr1:172843796..172843799, -
1.87e-86FFCP PHASE2:Mm9::chr5:30710455..30710464,-#_7b6f029a0160898c16bcaba809565328p9@Otof
1.87e-86FFCP PHASE1:Mm9::chr17:31335903..31335921,-#_7b6f029a0160898c16bcaba809565328p2@Tmprss3
1.87e-86FFCP PHASE2:Mm9::chr15:97806034..97806061,+#_7b6f029a0160898c16bcaba809565328p@chr15:97806034..97806061, +
1.87e-86FFCP PHASE2:Mm9::chr14:20649897..20649907,+#_7b6f029a0160898c16bcaba809565328p@chr14:20649897..20649907, +
1.87e-86FFCP PHASE2:Mm9::chr10:108316802..108316807,-#_7b6f029a0160898c16bcaba809565328p@chr10:108316802..108316807, -
1.87e-86FFCP PHASE1:Mm9::chr6:113251606..113251613,+#_7b6f029a0160898c16bcaba809565328p@chr6:113251606..113251613, +
1.87e-86FFCP PHASE1:Mm9::chr4:130461150..130461185,+#_7b6f029a0160898c16bcaba809565328p@chr4:130461150..130461185, +
1.87e-86FFCP PHASE2:Mm9::chr14:63099970..63099980,-#_7b6f029a0160898c16bcaba809565328p@chr14:63099970..63099980, -
1.87e-86FFCP PHASE1:Mm9::chr14:102297728..102297742,+#_7b6f029a0160898c16bcaba809565328p@chr14:102297728..102297742, +
1.87e-86FFCP PHASE1:Mm9::chr11:120222470..120222516,+#_7b6f029a0160898c16bcaba809565328p2@Fscn2
1.87e-86FFCP PHASE1:Mm9::chr14:47293496..47293510,-#_7b6f029a0160898c16bcaba809565328p@chr14:47293496..47293510, -
1.87e-86FFCP PHASE2:Mm9::chr8:125802236..125802251,-#_7b6f029a0160898c16bcaba809565328p3@Fanca
1.87e-86FFCP PHASE1:Mm9::chr10:67371994..67372010,+#_7b6f029a0160898c16bcaba809565328p@chr10:67371994..67372010, +
1.87e-86FFCP PHASE2:Mm9::chr3:35012397..35012405,+#_7b6f029a0160898c16bcaba809565328p@chr3:35012397..35012405, +
1.87e-86FFCP PHASE2:Mm9::chr4:115556972..115556979,+#_7b6f029a0160898c16bcaba809565328p3@Kncn
1.87e-86FFCP PHASE2:Mm9::chr17:13983102..13983126,+#_7b6f029a0160898c16bcaba809565328p@chr17:13983102..13983126, +
1.87e-86FFCP PHASE1:Mm9::chr9:42207852..42207876,-#_7b6f029a0160898c16bcaba809565328p2@Tecta
1.87e-86FFCP PHASE1:Mm9::chr7:29733825..29733837,-#_7b6f029a0160898c16bcaba809565328p@chr7:29733825..29733837, -
1.87e-86FFCP PHASE1:Mm9::chr1:93235228..93235249,+#_7b6f029a0160898c16bcaba809565328p@chr1:93235228..93235249, +
1.87e-86FFCP PHASE2:Mm9::chr9:42206730..42206739,-#_7b6f029a0160898c16bcaba809565328p@chr9:42206730..42206739, -
1.87e-86FFCP PHASE2:Mm9::chr15:85334335..85334353,+#_7b6f029a0160898c16bcaba809565328p@chr15:85334335..85334353, +
1.87e-86FFCP PHASE2:Mm9::chr6:113251614..113251623,+#_7b6f029a0160898c16bcaba809565328p@chr6:113251614..113251623, +
1.87e-86FFCP PHASE1:Mm9::chr14:20649897..20649907,+#_7b6f029a0160898c16bcaba809565328p@chr14:20649897..20649907, +
1.87e-86FFCP PHASE2:Mm9::chr13:78257454..78257465,+#_7b6f029a0160898c16bcaba809565328p@chr13:78257454..78257465, +
1.87e-86FFCP PHASE2:Mm9::chr13:48087761..48087775,-#_7b6f029a0160898c16bcaba809565328p@chr13:48087761..48087775, -
1.87e-86FFCP PHASE1:Mm9::chr7:109052262..109052291,-#_7b6f029a0160898c16bcaba809565328p1@Tomt
1.87e-86FFCP PHASE1:Mm9::chr2:152453066..152453075,-#_7b6f029a0160898c16bcaba809565328p@chr2:152453066..152453075, -
1.87e-86FFCP PHASE2:Mm9::chr3:69811606..69811616,+#_7b6f029a0160898c16bcaba809565328p2@Otol1
1.87e-86FFCP PHASE1:Mm9::chr5:28035962..28035983,+#_7b6f029a0160898c16bcaba809565328p@chr5:28035962..28035983, +
1.87e-86FFCP PHASE1:Mm9::chr4:101908153..101908163,+#_7b6f029a0160898c16bcaba809565328p@chr4:101908153..101908163, +
1.87e-86FFCP PHASE2:Mm9::chr18:81327205..81327211,+#_7b6f029a0160898c16bcaba809565328p@chr18:81327205..81327211, +
1.87e-86FFCP PHASE2:Mm9::chr11:11599532..11599539,-#_7b6f029a0160898c16bcaba809565328p@chr11:11599532..11599539, -

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