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{{UBERON
{{UBERON
|id=UBERON:0005913
|alt_id=
|name=zone of bone organ
|namespace=
|def=
|xref=FMA:10483
|is_a=UBERON:0000064;;UBERON:0004765
|synonym="bone organ zone" EXACT [FMA:10483]
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def=
|subset=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=UBERON:0005913
|is_a=UBERON:0000064
|is_obsolete=
|located_in=
|located_in=
|name=zone of bone organ
|namespace=FANTOM
|obo_creation_date=
|part_of=UBERON:0001474
|part_of=UBERON:0001474
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym="bone organ zone" EXACT [FMA:10483]
|union_of=
|xref=FMA:10483
}}
}}

Latest revision as of 17:55, 12 September 2014

Name:zone of bone organ
Namespace:FANTOM
Xrefs:
links:
FMA:10483
Synonyms: "bone organ zone" EXACT [FMA:10483]

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0000064(organ part)
part_of:UBERON:0001474(bone element)



Children

is a:UBERON:0001694 (petrous part of temporal bone)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

Mouse (Mus musculus)

  • 12157-128G6 (Sox2+ Supporting cells - organ of corti, pool1)
  • 12158-128G7 (Atoh+ Inner ear hair cells - organ of corti, pool1)
  • 12215-129E1 (Inner ear stem cells, 1st generation stem cells, pool1)
  • 12216-129E2 (Inner ear stem cells, 4th generation stem cells, pool1)
  • 12217-129E3 (Inner ear stem cells, differentiation, day03, pool1)
  • 12218-129E4 (Inner ear stem cells, differentiation, day10, pool1)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0005913 (zone of bone organ), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
1.87e-86FFCP PHASE2:Mm9::chr9:42206784..42206793,-#_7b6f029a0160898c16bcaba809565328p@chr9:42206784..42206793, -
1.87e-86FFCP PHASE2:Mm9::chr19:55255289..55255299,+#_7b6f029a0160898c16bcaba809565328p2@Tectb
1.87e-86FFCP PHASE2:Mm9::chr5:21371424..21371435,-#_7b6f029a0160898c16bcaba809565328p2@Slc26a5
1.87e-86FFCP PHASE1:Mm9::chr10:108316802..108316807,-#_7b6f029a0160898c16bcaba809565328p@chr10:108316802..108316807, -
1.87e-86FFCP PHASE2:Mm9::chr11:120222470..120222516,+#_7b6f029a0160898c16bcaba809565328p2@Fscn2
1.87e-86FFCP PHASE1:Mm9::chr1:172843847..172843880,-#_7b6f029a0160898c16bcaba809565328p@chr1:172843847..172843880, -
1.87e-86FFCP PHASE2:Mm9::chr11:102123554..102123566,+#_7b6f029a0160898c16bcaba809565328p4@BC030867
1.87e-86FFCP PHASE2:Mm9::chr5:28035962..28035983,+#_7b6f029a0160898c16bcaba809565328p@chr5:28035962..28035983, +
1.87e-86FFCP PHASE1:Mm9::chr16:96494788..96494801,+#_7b6f029a0160898c16bcaba809565328p12@B3galt5
1.87e-86FFCP PHASE2:Mm9::chr3:81012915..81012923,+#_7b6f029a0160898c16bcaba809565328p@chr3:81012915..81012923, +
1.87e-86FFCP PHASE2:Mm9::chr10:107349309..107349318,-#_7b6f029a0160898c16bcaba809565328p4@Otogl
1.87e-86FFCP PHASE1:Mm9::chr1:94627290..94627299,-#_7b6f029a0160898c16bcaba809565328p@chr1:94627290..94627299, -
1.87e-86FFCP PHASE2:Mm9::chr17:13983179..13983190,+#_7b6f029a0160898c16bcaba809565328p@chr17:13983179..13983190, +
1.87e-86FFCP PHASE1:Mm9::chr9:42207965..42207978,-#_7b6f029a0160898c16bcaba809565328p5@Tecta
1.87e-86FFCP PHASE1:Mm9::chr2:121206677..121206683,-#_7b6f029a0160898c16bcaba809565328p3@Strc
1.87e-86FFCP PHASE1:Mm9::chr3:154459246..154459253,+#_7b6f029a0160898c16bcaba809565328p@chr3:154459246..154459253, +
1.87e-86FFCP PHASE1:Mm9::chr11:89702580..89702593,-#_7b6f029a0160898c16bcaba809565328p@chr11:89702580..89702593, -
1.87e-86FFCP PHASE2:Mm9::chr13:78257518..78257522,+#_7b6f029a0160898c16bcaba809565328p@chr13:78257518..78257522, +
1.87e-86FFCP PHASE2:Mm9::chr1:16651649..16651655,+#_7b6f029a0160898c16bcaba809565328p@chr1:16651649..16651655, +
1.87e-86FFCP PHASE2:Mm9::chr2:29935952..29935993,+#_7b6f029a0160898c16bcaba809565328p7@Pkn3
1.87e-86FFCP PHASE1:Mm9::chr1:78523144..78523177,+#_7b6f029a0160898c16bcaba809565328p@chr1:78523144..78523177, +
1.87e-86FFCP PHASE1:Mm9::chr9:42206784..42206793,-#_7b6f029a0160898c16bcaba809565328p@chr9:42206784..42206793, -
1.87e-86FFCP PHASE2:Mm9::chr1:93235228..93235249,+#_7b6f029a0160898c16bcaba809565328p@chr1:93235228..93235249, +
1.87e-86FFCP PHASE2:Mm9::chr15:12848147..12848162,+#_7b6f029a0160898c16bcaba809565328p@chr15:12848147..12848162, +
1.87e-86FFCP PHASE2:Mm9::chr14:102297728..102297742,+#_7b6f029a0160898c16bcaba809565328p@chr14:102297728..102297742, +
1.87e-86FFCP PHASE1:Mm9::chr9:50968647..50968668,-#_7b6f029a0160898c16bcaba809565328p@chr9:50968647..50968668, -
1.87e-86FFCP PHASE2:Mm9::chr11:8405038..8405048,-#_7b6f029a0160898c16bcaba809565328p@chr11:8405038..8405048, -
1.87e-86FFCP PHASE1:Mm9::chr5:147854240..147854249,-#_7b6f029a0160898c16bcaba809565328p@chr5:147854240..147854249, -
1.87e-86FFCP PHASE1:Mm9::chr18:42158627..42158630,-#_7b6f029a0160898c16bcaba809565328p@chr18:42158627..42158630, -
1.87e-86FFCP PHASE2:Mm9::chr7:109265277..109265288,-#_7b6f029a0160898c16bcaba809565328p4@Chrna10
1.87e-86FFCP PHASE1:Mm9::chr2:53464168..53464175,+#_7b6f029a0160898c16bcaba809565328p@chr2:53464168..53464175, +
1.87e-86FFCP PHASE2:Mm9::chr19:21028739..21028785,-#_7b6f029a0160898c16bcaba809565328p1@Tmc1
1.87e-86FFCP PHASE1:Mm9::chr6:29428397..29428407,-#_7b6f029a0160898c16bcaba809565328p@chr6:29428397..29428407, -
1.87e-86FFCP PHASE1:Mm9::chr10:97109753..97109764,+#_7b6f029a0160898c16bcaba809565328p3@Epyc
1.87e-86FFCP PHASE2:Mm9::chr2:9811162..9811171,-#_7b6f029a0160898c16bcaba809565328p2@9230102O04Rik
1.87e-86FFCP PHASE1:Mm9::chr4:63079735..63079745,-#_7b6f029a0160898c16bcaba809565328p@chr4:63079735..63079745, -
1.87e-86FFCP PHASE1:Mm9::chr15:58022966..58022995,-#_7b6f029a0160898c16bcaba809565328p@chr15:58022966..58022995, -
1.87e-86FFCP PHASE1:Mm9::chr19:55255289..55255299,+#_7b6f029a0160898c16bcaba809565328p2@Tectb
1.87e-86FFCP PHASE1:Mm9::chr13:78257518..78257522,+#_7b6f029a0160898c16bcaba809565328p@chr13:78257518..78257522, +
1.87e-86FFCP PHASE2:Mm9::chr9:42207792..42207805,-#_7b6f029a0160898c16bcaba809565328p11@Tecta
1.87e-86FFCP PHASE1:Mm9::chr8:13414266..13414279,+#_7b6f029a0160898c16bcaba809565328p@chr8:13414266..13414279, +
1.87e-86FFCP PHASE1:Mm9::chr15:97806034..97806061,+#_7b6f029a0160898c16bcaba809565328p@chr15:97806034..97806061, +
1.87e-86FFCP PHASE2:Mm9::chr15:89215306..89215315,+#_7b6f029a0160898c16bcaba809565328p@chr15:89215306..89215315, +
1.87e-86FFCP PHASE2:Mm9::chr7:109052262..109052291,-#_7b6f029a0160898c16bcaba809565328p1@Tomt
1.87e-86FFCP PHASE1:Mm9::chr14:31283072..31283081,-#_7b6f029a0160898c16bcaba809565328p@chr14:31283072..31283081, -
1.87e-86FFCP PHASE2:Mm9::chr5:30710403..30710406,-#_7b6f029a0160898c16bcaba809565328p10@Otof
1.87e-86FFCP PHASE1:Mm9::chr6:113251606..113251613,+#_7b6f029a0160898c16bcaba809565328p@chr6:113251606..113251613, +
1.87e-86FFCP PHASE1:Mm9::chr4:130461150..130461185,+#_7b6f029a0160898c16bcaba809565328p@chr4:130461150..130461185, +
1.87e-86FFCP PHASE1:Mm9::chr17:13983095..13983100,+#_7b6f029a0160898c16bcaba809565328p@chr17:13983095..13983100, +
1.87e-86FFCP PHASE1:Mm9::chr13:43699228..43699239,+#_7b6f029a0160898c16bcaba809565328p@chr13:43699228..43699239, +
1.87e-86FFCP PHASE2:Mm9::chr17:31335953..31335957,-#_7b6f029a0160898c16bcaba809565328p3@Tmprss3
1.87e-86FFCP PHASE1:Mm9::chr7:88068153..88068160,-#_7b6f029a0160898c16bcaba809565328p10@Sec11a
1.87e-86FFCP PHASE1:Mm9::chr15:85334335..85334353,+#_7b6f029a0160898c16bcaba809565328p@chr15:85334335..85334353, +
1.87e-86FFCP PHASE1:Mm9::chr10:107349418..107349423,-#_7b6f029a0160898c16bcaba809565328p5@Otogl
1.87e-86FFCP PHASE2:Mm9::chr12:109905399..109905416,+#_7b6f029a0160898c16bcaba809565328p@chr12:109905399..109905416, +
1.87e-86FFCP PHASE1:Mm9::chr12:109905399..109905416,+#_7b6f029a0160898c16bcaba809565328p@chr12:109905399..109905416, +
1.87e-86FFCP PHASE2:Mm9::chr4:101908153..101908163,+#_7b6f029a0160898c16bcaba809565328p@chr4:101908153..101908163, +
1.87e-86FFCP PHASE2:Mm9::chr16:93971357..93971363,-#_7b6f029a0160898c16bcaba809565328p@chr16:93971357..93971363, -
1.87e-86FFCP PHASE1:Mm9::chr8:94180607..94180619,-#_7b6f029a0160898c16bcaba809565328p@chr8:94180607..94180619, -
1.87e-86FFCP PHASE1:Mm9::chr10:80806047..80806059,-#_7b6f029a0160898c16bcaba809565328p4@Gipc3
1.87e-86FFCP PHASE1:Mm9::chr7:29733825..29733837,-#_7b6f029a0160898c16bcaba809565328p@chr7:29733825..29733837, -
1.87e-86FFCP PHASE1:Mm9::chr1:93235228..93235249,+#_7b6f029a0160898c16bcaba809565328p@chr1:93235228..93235249, +
1.87e-86FFCP PHASE2:Mm9::chr8:13414289..13414295,+#_7b6f029a0160898c16bcaba809565328p@chr8:13414289..13414295, +
1.87e-86FFCP PHASE2:Mm9::chr9:66860888..66860899,+#_7b6f029a0160898c16bcaba809565328p@chr9:66860888..66860899, +
1.87e-86FFCP PHASE2:Mm9::chr2:53464178..53464186,+#_7b6f029a0160898c16bcaba809565328p@chr2:53464178..53464186, +
1.87e-86FFCP PHASE1:Mm9::chr9:42207792..42207805,-#_7b6f029a0160898c16bcaba809565328p11@Tecta
1.87e-86FFCP PHASE2:Mm9::chr6:113251570..113251578,+#_7b6f029a0160898c16bcaba809565328p@chr6:113251570..113251578, +
1.87e-86FFCP PHASE1:Mm9::chr7:109052262..109052291,-#_7b6f029a0160898c16bcaba809565328p1@Tomt
1.87e-86FFCP PHASE1:Mm9::chr2:152453066..152453075,-#_7b6f029a0160898c16bcaba809565328p@chr2:152453066..152453075, -
1.87e-86FFCP PHASE2:Mm9::chr13:76964459..76964469,+#_7b6f029a0160898c16bcaba809565328p15@Mctp1
1.87e-86FFCP PHASE1:Mm9::chr5:28035962..28035983,+#_7b6f029a0160898c16bcaba809565328p@chr5:28035962..28035983, +
1.87e-86FFCP PHASE1:Mm9::chr4:101908153..101908163,+#_7b6f029a0160898c16bcaba809565328p@chr4:101908153..101908163, +
1.87e-86FFCP PHASE1:Mm9::chr1:63733478..63733491,-#_7b6f029a0160898c16bcaba809565328p1@Dytn
1.87e-86FFCP PHASE2:Mm9::chr10:97109753..97109764,+#_7b6f029a0160898c16bcaba809565328p3@Epyc
1.87e-86FFCP PHASE2:Mm9::chr2:121206677..121206683,-#_7b6f029a0160898c16bcaba809565328p3@Strc
1.87e-86FFCP PHASE1:Mm9::chr6:86746562..86746579,-#_7b6f029a0160898c16bcaba809565328p@chr6:86746562..86746579, -
1.87e-86FFCP PHASE2:Mm9::chr3:154459184..154459195,+#_7b6f029a0160898c16bcaba809565328p@chr3:154459184..154459195, +
1.87e-86FFCP PHASE2:Mm9::chr2:67011941..67011951,+#_7b6f029a0160898c16bcaba809565328p3@Gm1322
1.87e-86FFCP PHASE2:Mm9::chr9:42207983..42207995,-#_7b6f029a0160898c16bcaba809565328p3@Tecta
1.87e-86FFCP PHASE1:Mm9::chr3:69811606..69811616,+#_7b6f029a0160898c16bcaba809565328p2@Otol1
1.87e-86FFCP PHASE1:Mm9::chr2:29935952..29935993,+#_7b6f029a0160898c16bcaba809565328p7@Pkn3
1.87e-86FFCP PHASE2:Mm9::chr2:73232344..73232356,-#_7b6f029a0160898c16bcaba809565328p@chr2:73232344..73232356, -
1.87e-86FFCP PHASE2:Mm9::chr1:172843885..172843890,-#_7b6f029a0160898c16bcaba809565328p@chr1:172843885..172843890, -
1.87e-86FFCP PHASE1:Mm9::chr3:106986057..106986062,+#_7b6f029a0160898c16bcaba809565328p1@Kcna10
1.87e-86FFCP PHASE1:Mm9::chr13:58283583..58283607,-#_7b6f029a0160898c16bcaba809565328p@chr13:58283583..58283607, -
1.87e-86FFCP PHASE1:Mm9::chr11:120222470..120222516,+#_7b6f029a0160898c16bcaba809565328p2@Fscn2
1.87e-86FFCP PHASE2:Mm9::chr13:43699188..43699216,+#_7b6f029a0160898c16bcaba809565328p@chr13:43699188..43699216, +
1.87e-86FFCP PHASE2:Mm9::chr9:42207375..42207384,-#_7b6f029a0160898c16bcaba809565328p@chr9:42207375..42207384, -
1.87e-86FFCP PHASE2:Mm9::chr19:55256373..55256384,+#_7b6f029a0160898c16bcaba809565328p@chr19:55256373..55256384, +
1.87e-86FFCP PHASE2:Mm9::chr1:60561636..60561645,-#_7b6f029a0160898c16bcaba809565328p@chr1:60561636..60561645, -
1.87e-86FFCP PHASE1:Mm9::chr1:172843885..172843890,-#_7b6f029a0160898c16bcaba809565328p@chr1:172843885..172843890, -
1.87e-86FFCP PHASE1:Mm9::chr12:13508015..13508019,+#_7b6f029a0160898c16bcaba809565328p@chr12:13508015..13508019, +
1.87e-86FFCP PHASE2:Mm9::chr7:133957514..133957529,+#_7b6f029a0160898c16bcaba809565328p@chr7:133957514..133957529, +
1.87e-86FFCP PHASE2:Mm9::chr10:107349378..107349390,-#_7b6f029a0160898c16bcaba809565328p1@Otogl
1.87e-86FFCP PHASE2:Mm9::chr17:13983198..13983203,+#_7b6f029a0160898c16bcaba809565328p@chr17:13983198..13983203, +
1.87e-86FFCP PHASE1:Mm9::chr9:42207983..42207995,-#_7b6f029a0160898c16bcaba809565328p3@Tecta
1.87e-86FFCP PHASE1:Mm9::chr2:121206695..121206711,-#_7b6f029a0160898c16bcaba809565328p1@Strc
1.87e-86FFCP PHASE1:Mm9::chr3:154693281..154693317,-#_7b6f029a0160898c16bcaba809565328p@chr3:154693281..154693317, -
1.87e-86FFCP PHASE1:Mm9::chr7:109265277..109265288,-#_7b6f029a0160898c16bcaba809565328p4@Chrna10
1.87e-86FFCP PHASE2:Mm9::chr13:78322370..78322376,-#_7b6f029a0160898c16bcaba809565328p4@uc007rhb.1

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