Personal tools

UBERON:0005641: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
{{UBERON
{{UBERON
|id=UBERON:0005641
|alt_id=
|name=otocyst epithelium
|namespace=
|def=
|xref=EHDAA2:0001344;;EMAPA:16671;;EMAPA:16996;;EMAPA:16999;;VHOG:0000986
|is_a=UBERON:0005291;;UBERON:0010314;;UBERON:0010371
|synonym=
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def=
|subset=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=UBERON:0005641
|is_a=UBERON:0005291 ;;UBERON:0010314 ;;UBERON:0010371
|is_obsolete=
|located_in=
|located_in=
|name=otocyst epithelium
|namespace=FANTOM
|obo_creation_date=
|part_of=UBERON:0003051
|part_of=UBERON:0003051
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym=
|union_of=
|xref=EHDAA2:0001344;;EMAPA:16671;;EMAPA:16996;;EMAPA:16999;;VHOG:0000986
}}
}}

Latest revision as of 17:54, 12 September 2014

Name:otocyst epithelium
Namespace:FANTOM
Xrefs:
links:

EHDAA2:0001344
EMAPA:16671
EMAPA:16996
EMAPA:16999

VHOG:0000986

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0005291(embryonic tissue),UBERON:0010314(structure with developmental contribution from neural crest),UBERON:0010371(ecto-epithelium)
part_of:UBERON:0003051(ear vesicle)



Children

develops from:UBERON:0001849 (membranous labyrinth),UBERON:0010113 (future membranous labyrinth)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology



Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0005641 (otocyst epithelium), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
1.87e-86FFCP PHASE2:Mm9::chr4:115556972..115556979,+#_4e73b244d3d11a5635caac6413b9528bp3@Kncn
1.87e-86FFCP PHASE2:Mm9::chr17:13983102..13983126,+#_4e73b244d3d11a5635caac6413b9528bp@chr17:13983102..13983126, +
1.87e-86FFCP PHASE1:Mm9::chr9:42207852..42207876,-#_4e73b244d3d11a5635caac6413b9528bp2@Tecta
1.87e-86FFCP PHASE1:Mm9::chr7:29733825..29733837,-#_4e73b244d3d11a5635caac6413b9528bp@chr7:29733825..29733837, -
1.87e-86FFCP PHASE1:Mm9::chr1:93235228..93235249,+#_4e73b244d3d11a5635caac6413b9528bp@chr1:93235228..93235249, +
1.87e-86FFCP PHASE2:Mm9::chr9:42206730..42206739,-#_4e73b244d3d11a5635caac6413b9528bp@chr9:42206730..42206739, -
1.87e-86FFCP PHASE1:Mm9::chr15:85334335..85334353,+#_4e73b244d3d11a5635caac6413b9528bp@chr15:85334335..85334353, +
1.87e-86FFCP PHASE2:Mm9::chr8:125802236..125802251,-#_4e73b244d3d11a5635caac6413b9528bp3@Fanca
1.87e-86FFCP PHASE2:Mm9::chr3:35012397..35012405,+#_4e73b244d3d11a5635caac6413b9528bp@chr3:35012397..35012405, +
1.87e-86FFCP PHASE2:Mm9::chr1:93218682..93218691,+#_4e73b244d3d11a5635caac6413b9528bp2@Espnl
1.87e-86FFCP PHASE2:Mm9::chr11:4689776..4689785,-#_4e73b244d3d11a5635caac6413b9528bp@chr11:4689776..4689785, -
1.87e-86FFCP PHASE2:Mm9::chr4:154208086..154208123,+#_4e73b244d3d11a5635caac6413b9528bp@chr4:154208086..154208123, +
1.87e-86FFCP PHASE2:Mm9::chr15:85334335..85334353,+#_4e73b244d3d11a5635caac6413b9528bp@chr15:85334335..85334353, +
1.87e-86FFCP PHASE2:Mm9::chr6:113251614..113251623,+#_4e73b244d3d11a5635caac6413b9528bp@chr6:113251614..113251623, +
1.87e-86FFCP PHASE2:Mm9::chr13:78257454..78257465,+#_4e73b244d3d11a5635caac6413b9528bp@chr13:78257454..78257465, +
1.87e-86FFCP PHASE2:Mm9::chr13:48087761..48087775,-#_4e73b244d3d11a5635caac6413b9528bp@chr13:48087761..48087775, -
1.87e-86FFCP PHASE1:Mm9::chr7:109052262..109052291,-#_4e73b244d3d11a5635caac6413b9528bp1@Tomt
1.87e-86FFCP PHASE1:Mm9::chr2:152453066..152453075,-#_4e73b244d3d11a5635caac6413b9528bp@chr2:152453066..152453075, -
1.87e-86FFCP PHASE2:Mm9::chr3:69811606..69811616,+#_4e73b244d3d11a5635caac6413b9528bp2@Otol1
1.87e-86FFCP PHASE1:Mm9::chr5:28035962..28035983,+#_4e73b244d3d11a5635caac6413b9528bp@chr5:28035962..28035983, +
1.87e-86FFCP PHASE1:Mm9::chr4:101908153..101908163,+#_4e73b244d3d11a5635caac6413b9528bp@chr4:101908153..101908163, +
1.87e-86FFCP PHASE2:Mm9::chr18:81327205..81327211,+#_4e73b244d3d11a5635caac6413b9528bp@chr18:81327205..81327211, +
1.87e-86FFCP PHASE2:Mm9::chr11:11599532..11599539,-#_4e73b244d3d11a5635caac6413b9528bp@chr11:11599532..11599539, -
1.87e-86FFCP PHASE2:Mm9::chr12:77084875..77084885,+#_4e73b244d3d11a5635caac6413b9528bp@chr12:77084875..77084885, +
1.87e-86FFCP PHASE1:Mm9::chr9:42206730..42206739,-#_4e73b244d3d11a5635caac6413b9528bp@chr9:42206730..42206739, -
1.87e-86FFCP PHASE1:Mm9::chr1:63733478..63733491,-#_4e73b244d3d11a5635caac6413b9528bp1@Dytn
1.87e-86FFCP PHASE2:Mm9::chr18:38104702..38104718,-#_4e73b244d3d11a5635caac6413b9528bp@chr18:38104702..38104718, -
1.87e-86FFCP PHASE1:Mm9::chr3:106986057..106986062,+#_4e73b244d3d11a5635caac6413b9528bp1@Kcna10
1.87e-86FFCP PHASE2:Mm9::chr3:154459246..154459253,+#_4e73b244d3d11a5635caac6413b9528bp@chr3:154459246..154459253, +
1.87e-86FFCP PHASE2:Mm9::chr9:42208023..42208043,-#_4e73b244d3d11a5635caac6413b9528bp4@Tecta
1.87e-86FFCP PHASE1:Mm9::chr6:86746562..86746579,-#_4e73b244d3d11a5635caac6413b9528bp@chr6:86746562..86746579, -
1.87e-86FFCP PHASE2:Mm9::chr1:63733478..63733491,-#_4e73b244d3d11a5635caac6413b9528bp1@Dytn
1.87e-86FFCP PHASE1:Mm9::chrX:154140781..154140788,+#_4e73b244d3d11a5635caac6413b9528bp@chrX:154140781..154140788, +
1.87e-86FFCP PHASE1:Mm9::chr3:69811606..69811616,+#_4e73b244d3d11a5635caac6413b9528bp2@Otol1
1.87e-86FFCP PHASE1:Mm9::chr2:29935952..29935993,+#_4e73b244d3d11a5635caac6413b9528bp7@Pkn3
1.87e-86FFCP PHASE2:Mm9::chr17:31335869..31335899,-#_4e73b244d3d11a5635caac6413b9528bp1@Tmprss3
1.87e-86FFCP PHASE2:Mm9::chr14:47293487..47293493,-#_4e73b244d3d11a5635caac6413b9528bp@chr14:47293487..47293493, -
1.87e-86FFCP PHASE1:Mm9::chr9:42208023..42208043,-#_4e73b244d3d11a5635caac6413b9528bp4@Tecta
1.87e-86FFCP PHASE2:Mm9::chr6:86745686..86745727,-#_4e73b244d3d11a5635caac6413b9528bp@chr6:86745686..86745727, -
1.87e-86FFCP PHASE2:Mm9::chr9:42207697..42207705,-#_4e73b244d3d11a5635caac6413b9528bp@chr9:42207697..42207705, -
1.87e-86FFCP PHASE1:Mm9::chr2:121206695..121206711,-#_4e73b244d3d11a5635caac6413b9528bp1@Strc
1.87e-86FFCP PHASE2:Mm9::chrX:154140800..154140810,+#_4e73b244d3d11a5635caac6413b9528bp@chrX:154140800..154140810, +
1.87e-86FFCP PHASE1:Mm9::chr1:172843885..172843890,-#_4e73b244d3d11a5635caac6413b9528bp@chr1:172843885..172843890, -
1.87e-86FFCP PHASE2:Mm9::chr18:59222033..59222043,+#_4e73b244d3d11a5635caac6413b9528bp7@A730017C20Rik
1.87e-86FFCP PHASE2:Mm9::chr1:43454162..43454170,-#_4e73b244d3d11a5635caac6413b9528bp@chr1:43454162..43454170, -
1.87e-86FFCP PHASE2:Mm9::chr10:107349418..107349423,-#_4e73b244d3d11a5635caac6413b9528bp5@Otogl
1.87e-86FFCP PHASE1:Mm9::chr11:114603036..114603048,+#_4e73b244d3d11a5635caac6413b9528bp@chr11:114603036..114603048, +
1.87e-86FFCP PHASE2:Mm9::chr9:50968647..50968668,-#_4e73b244d3d11a5635caac6413b9528bp@chr9:50968647..50968668, -
1.87e-86FFCP PHASE1:Mm9::chr11:4689837..4689845,-#_4e73b244d3d11a5635caac6413b9528bp@chr11:4689837..4689845, -
1.87e-86FFCP PHASE1:Mm9::chr3:154693281..154693317,-#_4e73b244d3d11a5635caac6413b9528bp@chr3:154693281..154693317, -
1.87e-86FFCP PHASE1:Mm9::chr7:109265277..109265288,-#_4e73b244d3d11a5635caac6413b9528bp4@Chrna10
1.87e-86FFCP PHASE2:Mm9::chr7:88068153..88068160,-#_4e73b244d3d11a5635caac6413b9528bp10@Sec11a
1.87e-86FFCP PHASE1:Mm9::chr5:3909290..3909299,+#_4e73b244d3d11a5635caac6413b9528bp@chr5:3909290..3909299, +
1.87e-86FFCP PHASE1:Mm9::chr4:115556939..115556945,+#_4e73b244d3d11a5635caac6413b9528bp4@Kncn
1.87e-86FFCP PHASE2:Mm9::chr1:194818647..194818660,-#_4e73b244d3d11a5635caac6413b9528bp@chr1:194818647..194818660, -
1.87e-86FFCP PHASE2:Mm9::chr5:68423014..68423037,+#_4e73b244d3d11a5635caac6413b9528bp1@Grxcr1
1.87e-86FFCP PHASE1:Mm9::chr9:42207697..42207705,-#_4e73b244d3d11a5635caac6413b9528bp@chr9:42207697..42207705, -
1.87e-86FFCP PHASE1:Mm9::chr7:27964761..27964768,+#_4e73b244d3d11a5635caac6413b9528bp@chr7:27964761..27964768, +
1.87e-86FFCP PHASE2:Mm9::chr10:80806047..80806059,-#_4e73b244d3d11a5635caac6413b9528bp4@Gipc3
1.87e-86FFCP PHASE1:Mm9::chr4:151505798..151505818,-#_4e73b244d3d11a5635caac6413b9528bp21@Espn
1.87e-86FFCP PHASE2:Mm9::chr9:92087926..92087938,+#_4e73b244d3d11a5635caac6413b9528bp2@Plscr5
1.87e-86FFCP PHASE2:Mm9::chr3:58626291..58626298,-#_4e73b244d3d11a5635caac6413b9528bp@chr3:58626291..58626298, -
1.87e-86FFCP PHASE1:Mm9::chr9:56208792..56208814,-#_4e73b244d3d11a5635caac6413b9528bp@chr9:56208792..56208814, -
1.87e-86FFCP PHASE1:Mm9::chr15:58480061..58480066,+#_4e73b244d3d11a5635caac6413b9528bp5@Fer1l6
1.87e-86FFCP PHASE2:Mm9::chr5:3909290..3909299,+#_4e73b244d3d11a5635caac6413b9528bp@chr5:3909290..3909299, +
1.87e-86FFCP PHASE1:Mm9::chr12:13572961..13572974,+#_4e73b244d3d11a5635caac6413b9528bp@chr12:13572961..13572974, +
1.87e-86FFCP PHASE1:Mm9::chr5:150945209..150945220,+#_4e73b244d3d11a5635caac6413b9528bp@chr5:150945209..150945220, +
1.87e-86FFCP PHASE1:Mm9::chr9:41495920..41495928,-#_4e73b244d3d11a5635caac6413b9528bp@chr9:41495920..41495928, -
1.87e-86FFCP PHASE1:Mm9::chr2:53464178..53464186,+#_4e73b244d3d11a5635caac6413b9528bp@chr2:53464178..53464186, +
1.87e-86FFCP PHASE1:Mm9::chr17:13983102..13983126,+#_4e73b244d3d11a5635caac6413b9528bp@chr17:13983102..13983126, +
1.87e-86FFCP PHASE2:Mm9::chr3:100724698..100724706,+#_4e73b244d3d11a5635caac6413b9528bp@chr3:100724698..100724706, +
1.87e-86FFCP PHASE2:Mm9::chr6:30619378..30619412,-#_4e73b244d3d11a5635caac6413b9528bp11@Tsga14
1.87e-86FFCP PHASE1:Mm9::chr10:107349378..107349390,-#_4e73b244d3d11a5635caac6413b9528bp1@Otogl
1.87e-86FFCP PHASE1:Mm9::chr15:103146966..103146971,-#_4e73b244d3d11a5635caac6413b9528bp@chr15:103146966..103146971, -
1.87e-86FFCP PHASE2:Mm9::chr19:10536797..10536802,-#_4e73b244d3d11a5635caac6413b9528bp@chr19:10536797..10536802, -
1.87e-86FFCP PHASE2:Mm9::chr9:56208792..56208814,-#_4e73b244d3d11a5635caac6413b9528bp@chr9:56208792..56208814, -
1.87e-86FFCP PHASE2:Mm9::chr9:42207887..42207960,-#_4e73b244d3d11a5635caac6413b9528bp1@Tecta
1.87e-86FFCP PHASE1:Mm9::chr11:94371127..94371139,-#_4e73b244d3d11a5635caac6413b9528bp@chr11:94371127..94371139, -
1.87e-86FFCP PHASE1:Mm9::chr19:55256373..55256384,+#_4e73b244d3d11a5635caac6413b9528bp@chr19:55256373..55256384, +
1.87e-86FFCP PHASE1:Mm9::chr13:78322370..78322376,-#_4e73b244d3d11a5635caac6413b9528bp4@uc007rhb.1
1.87e-86FFCP PHASE2:Mm9::chr1:172843813..172843834,-#_4e73b244d3d11a5635caac6413b9528bp@chr1:172843813..172843834, -
1.87e-86FFCP PHASE1:Mm9::chr1:182528371..182528385,+#_4e73b244d3d11a5635caac6413b9528bp@chr1:182528371..182528385, +
1.87e-86FFCP PHASE1:Mm9::chr14:31283085..31283097,-#_4e73b244d3d11a5635caac6413b9528bp@chr14:31283085..31283097, -
1.87e-86FFCP PHASE2:Mm9::chr4:130461150..130461185,+#_4e73b244d3d11a5635caac6413b9528bp@chr4:130461150..130461185, +
1.87e-86FFCP PHASE1:Mm9::chr6:113251614..113251623,+#_4e73b244d3d11a5635caac6413b9528bp@chr6:113251614..113251623, +
1.87e-86FFCP PHASE1:Mm9::chr19:10536767..10536777,-#_4e73b244d3d11a5635caac6413b9528bp@chr19:10536767..10536777, -
1.87e-86FFCP PHASE2:Mm9::chr4:115556989..115556997,+#_4e73b244d3d11a5635caac6413b9528bp1@Kncn
1.87e-86FFCP PHASE2:Mm9::chr17:13983160..13983167,+#_4e73b244d3d11a5635caac6413b9528bp@chr17:13983160..13983167, +
1.87e-86FFCP PHASE1:Mm9::chr9:42207887..42207960,-#_4e73b244d3d11a5635caac6413b9528bp1@Tecta
1.87e-86FFCP PHASE1:Mm9::chr1:93235253..93235264,+#_4e73b244d3d11a5635caac6413b9528bp@chr1:93235253..93235264, +
1.87e-86FFCP PHASE2:Mm9::chr9:42206745..42206774,-#_4e73b244d3d11a5635caac6413b9528bp@chr9:42206745..42206774, -
1.87e-86FFCP PHASE2:Mm9::chr19:55255206..55255223,+#_4e73b244d3d11a5635caac6413b9528bp1@Tectb
1.87e-86FFCP PHASE2:Mm9::chr3:106986057..106986062,+#_4e73b244d3d11a5635caac6413b9528bp1@Kcna10
1.87e-86FFCP PHASE1:Mm9::chr3:35012397..35012405,+#_4e73b244d3d11a5635caac6413b9528bp@chr3:35012397..35012405, +
1.87e-86FFCP PHASE1:Mm9::chr15:89215306..89215315,+#_4e73b244d3d11a5635caac6413b9528bp@chr15:89215306..89215315, +
1.87e-86FFCP PHASE2:Mm9::chr11:102123535..102123544,+#_4e73b244d3d11a5635caac6413b9528bp5@BC030867
1.87e-86FFCP PHASE1:Mm9::chr11:102123535..102123544,+#_4e73b244d3d11a5635caac6413b9528bp5@BC030867
1.87e-86FFCP PHASE1:Mm9::chr16:93971325..93971337,-#_4e73b244d3d11a5635caac6413b9528bp@chr16:93971325..93971337, -
1.87e-86FFCP PHASE2:Mm9::chr3:35012425..35012439,+#_4e73b244d3d11a5635caac6413b9528bp@chr3:35012425..35012439, +
1.87e-86FFCP PHASE2:Mm9::chr1:93218694..93218705,+#_4e73b244d3d11a5635caac6413b9528bp1@Espnl

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=UBERON:0005641&oldid=3277796"