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{{UBERON
{{UBERON
|id=UBERON:0003688
|alt_id=
|name=omentum
|namespace=
|def=
|xref=EV:0100084;;FMA:14650;;GAID:23;;galen:Omentum;;MESH:A.01.047.025.600.573;;ncithesaurus:Omentum;;SCTID:362710002
|is_a=UBERON:0000063;;UBERON:0004120
|synonym=
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def=
|subset=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=UBERON:0003688
|is_a=UBERON:0000063 ;;UBERON:0004120
|is_obsolete=
|located_in=
|located_in=
|name=omentum
|namespace=FANTOM
|obo_creation_date=
|part_of=UBERON:0001178
|part_of=UBERON:0001178
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.owl;;IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.owl;;IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym=
|union_of=
|xref=EV:0100084;;FMA:14650;;GAID:23;;galen:Omentum;;MESH:A.01.047.025.600.573;;ncithesaurus:Omentum;;SCTID:362710002
}}
}}

Latest revision as of 17:41, 12 September 2014

Name:omentum
Namespace:FANTOM
Xrefs:
links:

EV:0100084
FMA:14650
GAID:23
galen:Omentum
MESH:A.01.047.025.600.573
ncithesaurus:Omentum

SCTID:362710002

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0000063(organ segment),UBERON:0004120(mesoderm-derived structure)
part_of:UBERON:0001178(visceral peritoneum)



Children

is a:FF:0011165 (omentum)
part of:CL:0002579 (omentum preadipocyte),CL:0002615 (adipocyte of omentum tissue)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

Human (Homo sapiens)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0003688 (omentum), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
5.41e-163FFCP PHASE2:Hg19::chr18:20122740..20122747,+#_743b57a792e94bd043d3c54b1cc64d52p@chr18:20122740..20122747, +
5.41e-163FFCP PHASE1:Hg19::chr18:20122740..20122747,+#_743b57a792e94bd043d3c54b1cc64d52p@chr18:20122740..20122747, +
1.44e-101FFCP PHASE2:Hg19::chr15:39087815..39087824,-#_4a38a0ceef717559929ca270d5f1c867p@chr15:39087815..39087824, -
1.44e-101FFCP PHASE1:Hg19::chr15:39087815..39087824,-#_4a38a0ceef717559929ca270d5f1c867p@chr15:39087815..39087824, -
1.83e-98FFCP PHASE2:Hg19::chr7:73484112..73484119,+#_f473e76ccdb981cda1850e9dd42cf3d9p43@ELN
1.83e-98FFCP PHASE1:Hg19::chr7:73484112..73484119,+#_f473e76ccdb981cda1850e9dd42cf3d9p43@ELN
8.19e-75FFCP PHASE1:Hg19::chr4:112437251..112437278,+#_afc0c0d7516b3fe5944ec86ef916b972p@chr4:112437251..112437278, +
8.19e-75FFCP PHASE2:Hg19::chr15:81225699..81225710,+#_afc0c0d7516b3fe5944ec86ef916b972p26@KIAA1199
8.19e-75FFCP PHASE1:Hg19::chr15:81225699..81225710,+#_afc0c0d7516b3fe5944ec86ef916b972p26@KIAA1199
8.19e-75FFCP PHASE2:Hg19::chr4:112437251..112437278,+#_afc0c0d7516b3fe5944ec86ef916b972p@chr4:112437251..112437278, +
1.92e-69FFCP PHASE1:Hg19::chr10:105428550..105428555,-#_a3d1533ba196a2d732120407b28db0dfp25@SH3PXD2A
1.92e-69FFCP PHASE2:Hg19::chr10:105428550..105428555,-#_a3d1533ba196a2d732120407b28db0dfp25@SH3PXD2A
1.46e-68FFCP PHASE2:Hg19::chr15:81242191..81242201,+#_5b0025457b6d7c5328ebe1d92e8e5915p19@KIAA1199
1.46e-68FFCP PHASE1:Hg19::chr15:81242191..81242201,+#_5b0025457b6d7c5328ebe1d92e8e5915p19@KIAA1199
2.94e-68FFCP PHASE2:Hg19::chr15:26342114..26342124,+#_4e6083544c5522361254396aedbfe353p@chr15:26342114..26342124, +
2.94e-68FFCP PHASE1:Hg19::chr15:26342114..26342124,+#_4e6083544c5522361254396aedbfe353p@chr15:26342114..26342124, +
1.47e-66FFCP PHASE1:Hg19::chr7:40251315..40251325,-#_72489ba424855ea5fe88f18a69949316p@chr7:40251315..40251325, -
1.47e-66FFCP PHASE2:Hg19::chr7:40251315..40251325,-#_72489ba424855ea5fe88f18a69949316p@chr7:40251315..40251325, -
5.13e-66FFCP PHASE1:Hg19::chr6:30811934..30811939,-#_e143941c7e8c893dc8ac45bfd313d65dp@chr6:30811934..30811939, -
5.13e-66FFCP PHASE2:Hg19::chr6:30811934..30811939,-#_e143941c7e8c893dc8ac45bfd313d65dp@chr6:30811934..30811939, -
1.95e-63FFCP PHASE1:Hg19::chr19:18718144..18718158,+#_3b9dfeb83d12624590eddd189779f482p@chr19:18718144..18718158, +
1.95e-63FFCP PHASE2:Hg19::chr19:18718144..18718158,+#_3b9dfeb83d12624590eddd189779f482p@chr19:18718144..18718158, +
2.22e-63FFCP PHASE1:Hg19::chr14:23072291..23072333,+#_0237b724788049c868e59c564009625ap@chr14:23072291..23072333, +
2.22e-63FFCP PHASE2:Hg19::chr14:23072291..23072333,+#_0237b724788049c868e59c564009625ap@chr14:23072291..23072333, +
6.07e-62FFCP PHASE1:Hg19::chr19:18900805..18900820,-#_a9bad4c420e637627e899e36f3971a66p@chr19:18900805..18900820, -
6.07e-62FFCP PHASE2:Hg19::chr19:18900805..18900820,-#_a9bad4c420e637627e899e36f3971a66p@chr19:18900805..18900820, -
6.79e-60FFCP PHASE2:Hg19::chr12:8814772..8814786,-#_203fc35074fd4b1ac48b7b89762f2c0fp13@MFAP5
6.79e-60FFCP PHASE1:Hg19::chr12:8814772..8814786,-#_203fc35074fd4b1ac48b7b89762f2c0fp13@MFAP5
1.49e-59FFCP PHASE1:Hg19::chr12:15035058..15035069,+#_9e65414f81b09d6d20be2f7ddab4db7bp@chr12:15035058..15035069, +
1.49e-59FFCP PHASE2:Hg19::chr12:15035058..15035069,+#_9e65414f81b09d6d20be2f7ddab4db7bp@chr12:15035058..15035069, +
1.84e-59FFCP PHASE2:Hg19::chr9:93101022..93101028,+#_bd88c39540b22873ade0d08dbf4450a2p@chr9:93101022..93101028, +
1.84e-59FFCP PHASE1:Hg19::chr9:93101022..93101028,+#_bd88c39540b22873ade0d08dbf4450a2p@chr9:93101022..93101028, +
2.98e-59FFCP PHASE2:Hg19::chr2:191745264..191745275,+#_35730f98504a1b56c97b4d07929c5568p21@GLS
2.98e-59FFCP PHASE1:Hg19::chr2:191745264..191745275,+#_35730f98504a1b56c97b4d07929c5568p21@GLS
1.01e-58FFCP PHASE1:Hg19::chr4:112437339..112437350,+#_8e8b5a0b2580ddac8283e485968d3900p@chr4:112437339..112437350, +
1.01e-58FFCP PHASE2:Hg19::chr4:112437339..112437350,+#_8e8b5a0b2580ddac8283e485968d3900p@chr4:112437339..112437350, +
1.11e-58FFCP PHASE1:Hg19::chr9:103340443..103340454,+#_eb7c6daf11fb545da529610de3675f48p4@MURC
1.11e-58FFCP PHASE2:Hg19::chr9:103340443..103340454,+#_eb7c6daf11fb545da529610de3675f48p4@MURC
2.09e-58FFCP PHASE2:Hg19::chr19:18900031..18900054,+#_e7a67c54cd510f69f41c24d8ace9813ep@chr19:18900031..18900054, +
2.09e-58FFCP PHASE1:Hg19::chr19:18900031..18900054,+#_e7a67c54cd510f69f41c24d8ace9813ep@chr19:18900031..18900054, +
2.12e-58FFCP PHASE1:Hg19::chr8:80414650..80414654,+#_eb2db4fed7ca54e0310830bf7f0858a2p@chr8:80414650..80414654, +
2.12e-58FFCP PHASE2:Hg19::chr8:80414650..80414654,+#_eb2db4fed7ca54e0310830bf7f0858a2p@chr8:80414650..80414654, +
4.66e-58FFCP PHASE1:Hg19::chr19:18896512..18896527,-#_94963a04ea0d8e2c1640e421c5ac6af0p@chr19:18896512..18896527, -
4.66e-58FFCP PHASE2:Hg19::chr19:18896512..18896527,-#_94963a04ea0d8e2c1640e421c5ac6af0p@chr19:18896512..18896527, -
1.4e-55FFCP PHASE2:Hg19::chr19:18896642..18896656,-#_ddafb5b9bb2fe8eb32b81f202c0e8f5bp@chr19:18896642..18896656, -
1.4e-55FFCP PHASE1:Hg19::chr19:18896642..18896656,-#_ddafb5b9bb2fe8eb32b81f202c0e8f5bp@chr19:18896642..18896656, -
7.68e-54FFCP PHASE2:Hg19::chr19:18900836..18900848,-#_ef250b9cafff4efd5011bd812e480db9p@chr19:18900836..18900848, -
7.68e-54FFCP PHASE1:Hg19::chr19:18900836..18900848,-#_ef250b9cafff4efd5011bd812e480db9p@chr19:18900836..18900848, -
6.91e-53FFCP PHASE1:Hg19::chr11:103720186..103720199,-#_0e41e90494e602c44162f8cb10950a43p@chr11:103720186..103720199, -
6.91e-53FFCP PHASE2:Hg19::chr11:103720186..103720199,-#_0e41e90494e602c44162f8cb10950a43p@chr11:103720186..103720199, -
9.03e-53FFCP PHASE1:Hg19::chr6:169622388..169622400,-#_0f36f6b69317073aa0e23cd91401b542p@chr6:169622388..169622400, -
9.03e-53FFCP PHASE2:Hg19::chr6:169622388..169622400,-#_0f36f6b69317073aa0e23cd91401b542p@chr6:169622388..169622400, -
5.4e-52FFCP PHASE1:Hg19::chr10:105428632..105428639,-#_08644c18601732a264e3f8b1c4edafa6p26@SH3PXD2A
5.4e-52FFCP PHASE2:Hg19::chr10:105428632..105428639,-#_08644c18601732a264e3f8b1c4edafa6p26@SH3PXD2A
7.41e-52FFCP PHASE2:Hg19::chr15:81214436..81214445,+#_a446c854434544f362d462fc01b52631p13@KIAA1199
7.41e-52FFCP PHASE1:Hg19::chr15:81214436..81214445,+#_a446c854434544f362d462fc01b52631p13@KIAA1199
2.22e-51FFCP PHASE1:Hg19::chr6:75831042..75831053,-#_97d807fc2116949b90740f12b7153b27p@chr6:75831042..75831053, -
2.22e-51FFCP PHASE2:Hg19::chr6:75831042..75831053,-#_97d807fc2116949b90740f12b7153b27p@chr6:75831042..75831053, -
3.75e-51FFCP PHASE2:Hg19::chr19:18893717..18893745,+#_c8d834dade01fe5ed39bfd732f24cb58p@chr19:18893717..18893745, +
3.75e-51FFCP PHASE1:Hg19::chr19:18893717..18893745,+#_c8d834dade01fe5ed39bfd732f24cb58p@chr19:18893717..18893745, +
4.87e-51FFCP PHASE2:Hg19::chr19:18896862..18896874,-#_5643e33ddebf2f1ac5282f97c3574fc1p@chr19:18896862..18896874, -
4.87e-51FFCP PHASE1:Hg19::chr19:18896862..18896874,-#_5643e33ddebf2f1ac5282f97c3574fc1p@chr19:18896862..18896874, -
6.9e-51FFCP PHASE2:Hg19::chr19:18897375..18897390,-#_aadf86ee6afab7d9a6bead000bbac4dbp4@COMP
6.9e-51FFCP PHASE1:Hg19::chr19:18897375..18897390,-#_aadf86ee6afab7d9a6bead000bbac4dbp4@COMP
1.05e-49FFCP PHASE1:Hg19::chr5:150138790..150138796,-#_ac29070f55c9a5c39b822d6667813036p18@DCTN4
1.05e-49FFCP PHASE2:Hg19::chr5:150138790..150138796,-#_ac29070f55c9a5c39b822d6667813036p18@DCTN4
1.24e-49FFCP PHASE2:Hg19::chr15:83330983..83330997,-#_312fb1f1f4dd95956c472de0d60aac04p10@AP3B2
1.24e-49FFCP PHASE1:Hg19::chr15:83330983..83330997,-#_312fb1f1f4dd95956c472de0d60aac04p10@AP3B2
1.73e-49FFCP PHASE2:Hg19::chr11:111896671..111896691,+#_f525c392915f032ce7a6d4ed27f200cap@chr11:111896671..111896691, +
1.73e-49FFCP PHASE1:Hg19::chr11:111896671..111896691,+#_f525c392915f032ce7a6d4ed27f200cap@chr11:111896671..111896691, +
2.39e-49FFCP PHASE1:Hg19::chr12:8814756..8814767,-#_43381ca3fd23333c8d6f906bcf9cf205p19@MFAP5
2.39e-49FFCP PHASE2:Hg19::chr12:8814756..8814767,-#_43381ca3fd23333c8d6f906bcf9cf205p19@MFAP5
4.72e-49FFCP PHASE1:Hg19::chr19:18899276..18899289,-#_20016e592463f5b3bdafdc1f0bdd852dp@chr19:18899276..18899289, -
4.72e-49FFCP PHASE2:Hg19::chr19:18899276..18899289,-#_20016e592463f5b3bdafdc1f0bdd852dp@chr19:18899276..18899289, -
6.44e-49FFCP PHASE2:Hg19::chr13:102104738..102104747,+#_6f5853d714aa765a1082af3dbb93b6edp11@ITGBL1
6.44e-49FFCP PHASE1:Hg19::chr13:102104738..102104747,+#_6f5853d714aa765a1082af3dbb93b6edp11@ITGBL1
1.14e-48FFCP PHASE2:Hg19::chr4:88928893..88928902,+#_c0ccd897aabcee54a8b3258407d1e5b2p4@PKD2
1.14e-48FFCP PHASE1:Hg19::chr4:88928893..88928902,+#_c0ccd897aabcee54a8b3258407d1e5b2p4@PKD2
1.58e-48FFCP PHASE1:Hg19::chr6:75843119..75843139,-#_e58125975a7c1e1095012d4767f1e72fp@chr6:75843119..75843139, -
1.58e-48FFCP PHASE2:Hg19::chr6:75843119..75843139,-#_e58125975a7c1e1095012d4767f1e72fp@chr6:75843119..75843139, -
1.77e-48FFCP PHASE2:Hg19::chr8:74464406..74464424,-#_669b9c494233cbce0509432d297a5085p4@STAU2
1.77e-48FFCP PHASE1:Hg19::chr8:74464406..74464424,-#_669b9c494233cbce0509432d297a5085p4@STAU2
1.99e-48FFCP PHASE1:Hg19::chr19:18893611..18893635,-#_55d5a3d98accd45ced8e930e60b5a696p1@AK094919
1.99e-48FFCP PHASE2:Hg19::chr19:18893611..18893635,-#_55d5a3d98accd45ced8e930e60b5a696p1@AK094919
2.25e-48FFCP PHASE2:Hg19::chr7:73484184..73484197,+#_c7b277a3d0785ae5b05a6b850e0c9725p19@ELN
2.25e-48FFCP PHASE1:Hg19::chr7:73484184..73484197,+#_c7b277a3d0785ae5b05a6b850e0c9725p19@ELN
2.83e-48FFCP PHASE2:Hg19::chr3:141719209..141719215,-#_08893dbddd665d9c330468beaabe0163p10@TFDP2
2.83e-48FFCP PHASE1:Hg19::chr3:141719209..141719215,-#_08893dbddd665d9c330468beaabe0163p10@TFDP2
5.81e-48FFCP PHASE1:Hg19::chr3:112321809..112321819,-#_0adbe84ad256ae99f613f9b33b83d6abp@chr3:112321809..112321819, -
5.81e-48FFCP PHASE2:Hg19::chr3:112321809..112321819,-#_0adbe84ad256ae99f613f9b33b83d6abp@chr3:112321809..112321819, -
3.73e-47FFCP PHASE2:Hg19::chr19:18896798..18896823,-#_48e25a370b18fe9baecb81ce6b610181p@chr19:18896798..18896823, -
3.73e-47FFCP PHASE1:Hg19::chr19:18896798..18896823,-#_48e25a370b18fe9baecb81ce6b610181p@chr19:18896798..18896823, -
4.75e-47FFCP PHASE2:Hg19::chr19:18898324..18898353,+#_9844110dbe8bcf0f12f5b9bc8ad83d59p@chr19:18898324..18898353, +
4.75e-47FFCP PHASE1:Hg19::chr19:18898324..18898353,+#_9844110dbe8bcf0f12f5b9bc8ad83d59p@chr19:18898324..18898353, +
7.35e-47FFCP PHASE2:Hg19::chr19:38812519..38812533,-#_610b8fccdef7cbe292d722ecb2aa1cf4p@chr19:38812519..38812533, -
7.35e-47FFCP PHASE1:Hg19::chr19:38812519..38812533,-#_610b8fccdef7cbe292d722ecb2aa1cf4p@chr19:38812519..38812533, -
2.79e-46FFCP PHASE1:Hg19::chr7:37947092..37947121,+#_8cccbd43d9a6ef27585d6475b9931e15p2@CU691333
2.79e-46FFCP PHASE2:Hg19::chr7:37947092..37947121,+#_8cccbd43d9a6ef27585d6475b9931e15p2@CU691333
3.81e-46FFCP PHASE2:Hg19::chr19:18900850..18900868,-#_298ed3550685551ea9d054227b107512p@chr19:18900850..18900868, -
3.81e-46FFCP PHASE1:Hg19::chr19:18900850..18900868,-#_298ed3550685551ea9d054227b107512p@chr19:18900850..18900868, -

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