CL:0002573: Difference between revisions
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{{CL | {{CL | ||
| | |alt_id= | ||
|comment= | |comment= | ||
|created_by=tmeehan | |created_by=tmeehan | ||
| | |def="A glial cell that ensheathes axons of neuron in the peripheral nervous system and are necessary for their maintainance and function." [GOC:tfm] | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
|disjoint_from= | |||
|has_quality= | |has_quality= | ||
|id=CL:0002573 | |||
|is_a=CL:0000243 | |||
|is_obsolete= | |||
|located_in= | |located_in= | ||
|name=Schwann cell | |||
|namespace=FANTOM | |||
|obo_creation_date=2011-03-02T01:19:27Z | |||
|part_of=UBERON:0000010 | |part_of=UBERON:0000010 | ||
|preceded_by= | |||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.owl;;IAO:0000412 http://purl.obolibrary.org/obo/cl.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.owl;;IAO:0000412 http://purl.obolibrary.org/obo/cl.owl | ||
| | |subset= | ||
| | |synonym= | ||
|union_of= | |||
|xref=BTO:0001220 | |||
}} | }} | ||
Latest revision as of 16:44, 12 September 2014
| Name: | Schwann cell | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "A glial cell that ensheathes axons of neuron in the peripheral nervous system and are necessary for their maintainance and function." [GOC:tfm] | ||
| Xrefs: |
| ||
| Created by: | tmeehan | ||
| Creation date: | 2011-03-02T01:19:27Z |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | CL:0000243(glial cell (sensu Vertebrata)) |
|---|---|
| part_of: | UBERON:0000010(peripheral nervous system) |
Children
| is a: | CL:0000218 (myelinating Schwann cell;;Schwann cell),CL:0002376 (non-myelinating Schwann cell),CL:0002377 (immature Schwann cell) |
|---|---|
| derives from: | FF:0000116 (mouse Schwann cell sample),FF:0000159 (human Schwann cell sample),FF:0103225 (neurilemoma cell line sample) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 10442-106F1 (schwannoma cell line:HS-PSS)
- 10559-108A1
- 10670-109D4
- 10685-109F1
- 10729-110A9 (neurofibroma cell line:Hs 53.T)
- 11498-119F4 (Schwann Cells, donor1)
- 11578-120F3 (Schwann Cells, donor2)
- 11651-122E4 (Schwann, donor3)
- 11659-122F3 (Schwann Cells, donor3)
- 11728-123D9 (Schwann, donor1)
... further results Mouse (Mus musculus)
- 10442-106F1 (schwannoma cell line:HS-PSS)
- 10559-108A1
- 10670-109D4
- 10685-109F1
- 10729-110A9 (neurofibroma cell line:Hs 53.T)
- 11498-119F4 (Schwann Cells, donor1)
- 11578-120F3 (Schwann Cells, donor2)
- 11651-122E4 (Schwann, donor3)
- 11659-122F3 (Schwann Cells, donor3)
- 11728-123D9 (Schwann, donor1)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002573 (Schwann cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 8.98e-131 | FFCP PHASE2:Hg19::chr20:40634129..40634138,+#_d23f35808b012f4ad5c9688c361c4df4 | p@chr20:40634129..40634138, + |
| 8.98e-131 | FFCP PHASE2:Hg19::chr3:189506429..189506448,+#_d23f35808b012f4ad5c9688c361c4df4 | p@chr3:189506429..189506448, + |
| 8.98e-131 | FFCP PHASE1:Hg19::chr8:36807722..36807727,-#_d23f35808b012f4ad5c9688c361c4df4 | p@chr8:36807722..36807727, - |
| 8.98e-131 | FFCP PHASE2:Hg19::chr7:15599916..15599923,-#_d23f35808b012f4ad5c9688c361c4df4 | p@chr7:15599916..15599923, - |
| 8.98e-131 | FFCP PHASE1:Hg19::chr20:40634129..40634138,+#_d23f35808b012f4ad5c9688c361c4df4 | p@chr20:40634129..40634138, + |
| 8.98e-131 | FFCP PHASE1:Hg19::chr3:189506429..189506448,+#_d23f35808b012f4ad5c9688c361c4df4 | p@chr3:189506429..189506448, + |
| 8.98e-131 | FFCP PHASE1:Hg19::chr7:15599916..15599923,-#_d23f35808b012f4ad5c9688c361c4df4 | p@chr7:15599916..15599923, - |
| 8.98e-131 | FFCP PHASE2:Hg19::chr8:36807722..36807727,-#_d23f35808b012f4ad5c9688c361c4df4 | p@chr8:36807722..36807727, - |
| 6.24e-88 | FFCP PHASE2:Hg19::chr10:28297133..28297154,-#_e7d731f50f863ed3290d2269afda5dc4 | p@chr10:28297133..28297154, - |
| 6.24e-88 | FFCP PHASE1:Hg19::chr3:6221506..6221523,-#_e7d731f50f863ed3290d2269afda5dc4 | p@chr3:6221506..6221523, - |
| 6.24e-88 | FFCP PHASE2:Hg19::chr1:152748895..152748921,+#_e7d731f50f863ed3290d2269afda5dc4 | p1@LCE1F |
| 6.24e-88 | FFCP PHASE1:Hg19::chr10:28297133..28297154,-#_e7d731f50f863ed3290d2269afda5dc4 | p@chr10:28297133..28297154, - |
| 6.24e-88 | FFCP PHASE1:Hg19::chr1:152748895..152748921,+#_e7d731f50f863ed3290d2269afda5dc4 | p1@LCE1F |
| 6.24e-88 | FFCP PHASE2:Hg19::chr3:6221506..6221523,-#_e7d731f50f863ed3290d2269afda5dc4 | p@chr3:6221506..6221523, - |
| 1.52e-87 | FFCP PHASE2:Hg19::chr4:177796841..177796851,+#_e593e05ce3f44d3366bd7477a63d86a1 | p1@ENST00000508790 |
| 1.52e-87 | FFCP PHASE1:Hg19::chr10:110165577..110165582,-#_e593e05ce3f44d3366bd7477a63d86a1 | p@chr10:110165577..110165582, - |
| 1.52e-87 | FFCP PHASE2:Hg19::chr11:127965904..127965913,+#_e593e05ce3f44d3366bd7477a63d86a1 | p@chr11:127965904..127965913, + |
| 1.52e-87 | FFCP PHASE1:Hg19::chr4:177796841..177796851,+#_e593e05ce3f44d3366bd7477a63d86a1 | p1@ENST00000508790 |
| 1.52e-87 | FFCP PHASE1:Hg19::chr11:127965904..127965913,+#_e593e05ce3f44d3366bd7477a63d86a1 | p@chr11:127965904..127965913, + |
| 1.52e-87 | FFCP PHASE2:Hg19::chr10:110165577..110165582,-#_e593e05ce3f44d3366bd7477a63d86a1 | p@chr10:110165577..110165582, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr18:24270578..24270588,-#_20d358eda0c9b671683337ddf387ec9d | p@chr18:24270578..24270588, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr17:27698308..27698322,+#_20d358eda0c9b671683337ddf387ec9d | p@chr17:27698308..27698322, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr13:20332675..20332683,+#_20d358eda0c9b671683337ddf387ec9d | p@chr13:20332675..20332683, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr18:57302359..57302364,+#_20d358eda0c9b671683337ddf387ec9d | p18@Megf10 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr7:138011022..138011028,+#_20d358eda0c9b671683337ddf387ec9d | p@chr7:138011022..138011028, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr5:152055079..152055086,+#_20d358eda0c9b671683337ddf387ec9d | p@chr5:152055079..152055086, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr11:19939078..19939081,+#_20d358eda0c9b671683337ddf387ec9d | p@chr11:19939078..19939081, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr1:185424641..185424650,+#_20d358eda0c9b671683337ddf387ec9d | p@chr1:185424641..185424650, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr18:57302359..57302364,+#_20d358eda0c9b671683337ddf387ec9d | p18@Megf10 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr1:185424641..185424650,+#_20d358eda0c9b671683337ddf387ec9d | p@chr1:185424641..185424650, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr11:99720036..99720055,-#_20d358eda0c9b671683337ddf387ec9d | p@chr11:99720036..99720055, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr6:137468262..137468263,-#_20d358eda0c9b671683337ddf387ec9d | p13@Eps8 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr11:99720058..99720068,-#_20d358eda0c9b671683337ddf387ec9d | p@chr11:99720058..99720068, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr2:13346379..13346390,-#_20d358eda0c9b671683337ddf387ec9d | p@chr2:13346379..13346390, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr7:138011031..138011037,+#_20d358eda0c9b671683337ddf387ec9d | p@chr7:138011031..138011037, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr13:95819359..95819371,-#_20d358eda0c9b671683337ddf387ec9d | p@chr13:95819359..95819371, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr13:95819359..95819371,-#_20d358eda0c9b671683337ddf387ec9d | p@chr13:95819359..95819371, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr6:31038349..31038357,-#_20d358eda0c9b671683337ddf387ec9d | p2@ENSMUST00000123757 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr18:24270578..24270588,-#_20d358eda0c9b671683337ddf387ec9d | p@chr18:24270578..24270588, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr12:45626625..45626647,+#_20d358eda0c9b671683337ddf387ec9d | p@chr12:45626625..45626647, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr2:13496978..13496987,+#_20d358eda0c9b671683337ddf387ec9d | p@chr2:13496978..13496987, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr11:56925925..56925960,-#_20d358eda0c9b671683337ddf387ec9d | p@chr11:56925925..56925960, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chrX:149092046..149092052,-#_20d358eda0c9b671683337ddf387ec9d | p@chrX:149092046..149092052, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr18:57302368..57302389,+#_20d358eda0c9b671683337ddf387ec9d | p7@Megf10 |
| 1.87e-86 | FFCP PHASE1:Mm9::chrX:149092046..149092052,-#_20d358eda0c9b671683337ddf387ec9d | p@chrX:149092046..149092052, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr14:74279307..74279342,+#_20d358eda0c9b671683337ddf387ec9d | p@chr14:74279307..74279342, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr7:138011031..138011037,+#_20d358eda0c9b671683337ddf387ec9d | p@chr7:138011031..138011037, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr9:14575585..14575594,-#_20d358eda0c9b671683337ddf387ec9d | p7@1700012B09Rik |
| 1.87e-86 | FFCP PHASE1:Mm9::chr15:87485458..87485465,+#_20d358eda0c9b671683337ddf387ec9d | p@chr15:87485458..87485465, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr15:87485458..87485465,+#_20d358eda0c9b671683337ddf387ec9d | p@chr15:87485458..87485465, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr18:57302368..57302389,+#_20d358eda0c9b671683337ddf387ec9d | p7@Megf10 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr11:99720058..99720068,-#_20d358eda0c9b671683337ddf387ec9d | p@chr11:99720058..99720068, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr11:19939078..19939081,+#_20d358eda0c9b671683337ddf387ec9d | p@chr11:19939078..19939081, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr7:114866423..114866442,+#_20d358eda0c9b671683337ddf387ec9d | p@chr7:114866423..114866442, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr5:152054997..152055007,+#_20d358eda0c9b671683337ddf387ec9d | p@chr5:152054997..152055007, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr1:92754564..92754577,+#_20d358eda0c9b671683337ddf387ec9d | p@chr1:92754564..92754577, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr9:50562386..50562393,+#_20d358eda0c9b671683337ddf387ec9d | p@chr9:50562386..50562393, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chrX:70920870..70920877,+#_20d358eda0c9b671683337ddf387ec9d | p21@Slc6a8 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr18:57302392..57302409,+#_20d358eda0c9b671683337ddf387ec9d | p11@Megf10 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr10:128359639..128359653,+#_20d358eda0c9b671683337ddf387ec9d | p@chr10:128359639..128359653, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr18:57302392..57302409,+#_20d358eda0c9b671683337ddf387ec9d | p11@Megf10 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr6:17413432..17413442,+#_20d358eda0c9b671683337ddf387ec9d | p10@Met |
| 1.87e-86 | FFCP PHASE1:Mm9::chrX:70920870..70920877,+#_20d358eda0c9b671683337ddf387ec9d | p21@Slc6a8 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr9:32560436..32560445,+#_20d358eda0c9b671683337ddf387ec9d | p@chr9:32560436..32560445, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr7:137963832..137963843,+#_20d358eda0c9b671683337ddf387ec9d | p@chr7:137963832..137963843, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr18:57302272..57302282,+#_20d358eda0c9b671683337ddf387ec9d | p16@Megf10 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr6:17441128..17441144,+#_20d358eda0c9b671683337ddf387ec9d | p@chr6:17441128..17441144, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr10:128359639..128359653,+#_20d358eda0c9b671683337ddf387ec9d | p@chr10:128359639..128359653, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr15:87485366..87485375,+#_20d358eda0c9b671683337ddf387ec9d | p@chr15:87485366..87485375, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr15:87485366..87485375,+#_20d358eda0c9b671683337ddf387ec9d | p@chr15:87485366..87485375, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr9:50562386..50562393,+#_20d358eda0c9b671683337ddf387ec9d | p@chr9:50562386..50562393, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr2:13496978..13496987,+#_20d358eda0c9b671683337ddf387ec9d | p@chr2:13496978..13496987, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr5:152055079..152055086,+#_20d358eda0c9b671683337ddf387ec9d | p@chr5:152055079..152055086, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr18:57302272..57302282,+#_20d358eda0c9b671683337ddf387ec9d | p16@Megf10 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr14:74279307..74279342,+#_20d358eda0c9b671683337ddf387ec9d | p@chr14:74279307..74279342, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr18:57302410..57302419,+#_20d358eda0c9b671683337ddf387ec9d | p17@Megf10 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr7:114866423..114866442,+#_20d358eda0c9b671683337ddf387ec9d | p@chr7:114866423..114866442, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr6:137465516..137465540,-#_20d358eda0c9b671683337ddf387ec9d | p@chr6:137465516..137465540, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr7:138004756..138004766,+#_20d358eda0c9b671683337ddf387ec9d | p@chr7:138004756..138004766, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr18:57302410..57302419,+#_20d358eda0c9b671683337ddf387ec9d | p17@Megf10 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr17:27698308..27698322,+#_20d358eda0c9b671683337ddf387ec9d | p@chr17:27698308..27698322, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr7:138004756..138004766,+#_20d358eda0c9b671683337ddf387ec9d | p@chr7:138004756..138004766, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr1:92754564..92754577,+#_20d358eda0c9b671683337ddf387ec9d | p@chr1:92754564..92754577, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr18:57302324..57302348,+#_20d358eda0c9b671683337ddf387ec9d | p6@Megf10 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr11:95431700..95431710,-#_20d358eda0c9b671683337ddf387ec9d | p@chr11:95431700..95431710, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr12:45626625..45626647,+#_20d358eda0c9b671683337ddf387ec9d | p@chr12:45626625..45626647, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr11:95431700..95431710,-#_20d358eda0c9b671683337ddf387ec9d | p@chr11:95431700..95431710, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr5:152054997..152055007,+#_20d358eda0c9b671683337ddf387ec9d | p@chr5:152054997..152055007, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr15:87485402..87485411,+#_20d358eda0c9b671683337ddf387ec9d | p@chr15:87485402..87485411, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr6:17413432..17413442,+#_20d358eda0c9b671683337ddf387ec9d | p10@Met |
| 1.87e-86 | FFCP PHASE2:Mm9::chr15:87485402..87485411,+#_20d358eda0c9b671683337ddf387ec9d | p@chr15:87485402..87485411, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr7:137963832..137963843,+#_20d358eda0c9b671683337ddf387ec9d | p@chr7:137963832..137963843, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr13:20332675..20332683,+#_20d358eda0c9b671683337ddf387ec9d | p@chr13:20332675..20332683, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr18:57302324..57302348,+#_20d358eda0c9b671683337ddf387ec9d | p6@Megf10 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr2:13346379..13346390,-#_20d358eda0c9b671683337ddf387ec9d | p@chr2:13346379..13346390, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr6:137465516..137465540,-#_20d358eda0c9b671683337ddf387ec9d | p@chr6:137465516..137465540, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr11:99720036..99720055,-#_20d358eda0c9b671683337ddf387ec9d | p@chr11:99720036..99720055, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr9:32560436..32560445,+#_20d358eda0c9b671683337ddf387ec9d | p@chr9:32560436..32560445, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr7:138011022..138011028,+#_20d358eda0c9b671683337ddf387ec9d | p@chr7:138011022..138011028, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr11:56925925..56925960,-#_20d358eda0c9b671683337ddf387ec9d | p@chr11:56925925..56925960, - |
