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{{CL
{{CL
|id=CL:1000398
|alt_id=
|name=endothelial cell of hepatic sinusoid
|namespace=cell
|def="An endothelial cell that is part of the hepatic sinusoid." [GOC:tfm]
|xref=FMA:62911
|is_a=CL:0000182;;CL:0002262
|synonym="endotheliocyte of hepatic sinusoid" EXACT [FMA:62911]
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="An endothelial cell that is part of the hepatic sinusoid." [GOC:tfm]
|subset=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=CL:1000398
|is_a=CL:0000182 ;;CL:0002262
|is_obsolete=
|located_in=
|located_in=
|part_of=
|name=endothelial cell of hepatic sinusoid
|namespace=FANTOM
|obo_creation_date=
|part_of=UBERON:0001281
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.owl;;IAO:0000412 http://purl.obolibrary.org/obo/cl.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.owl;;IAO:0000412 http://purl.obolibrary.org/obo/cl.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym="endotheliocyte of hepatic sinusoid" EXACT [FMA:62911]
|union_of=
|xref=FMA:62911
}}
}}

Latest revision as of 16:46, 12 September 2014

Name:endothelial cell of hepatic sinusoid
Namespace:FANTOM
Definition:"An endothelial cell that is part of the hepatic sinusoid." [GOC:tfm]
Xrefs:
links:
FMA:62911
Synonyms: "endotheliocyte of hepatic sinusoid" EXACT [FMA:62911]


Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:CL:0000182(hepatocyte),CL:0002262(endothelial cell of sinusoid)
part_of:UBERON:0001281(hepatic sinusoid)



Children


derives from:FF:0000076 (hepatic sinusoidal endothelial cell sample)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.

Human (Homo sapiens)

Mouse (Mus musculus)


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:1000398 (endothelial cell of hepatic sinusoid), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
8.99e-131FFCP PHASE1:Hg19::chr7:158330204..158330217,+#_943cb5b8d4bad56b59b1f7fa633654eap2@ENST00000448698
8.99e-131FFCP PHASE2:Hg19::chr7:158330204..158330217,+#_943cb5b8d4bad56b59b1f7fa633654eap2@ENST00000448698
3.07e-86FFCP PHASE1:Mm9::chr8:114250006..114250039,-#_e0395a4bf36a48b5d4069cec6af9a87dp@chr8:114250006..114250039, -
3.07e-86FFCP PHASE2:Mm9::chr3:121593688..121593695,+#_e0395a4bf36a48b5d4069cec6af9a87dp@chr3:121593688..121593695, +
3.07e-86FFCP PHASE1:Mm9::chr12:88237840..88237851,-#_e0395a4bf36a48b5d4069cec6af9a87dp@chr12:88237840..88237851, -
3.07e-86FFCP PHASE1:Mm9::chr10:85585991..85586025,-#_e0395a4bf36a48b5d4069cec6af9a87dp@chr10:85585991..85586025, -
3.07e-86FFCP PHASE1:Mm9::chr17:34796428..34796430,-#_e0395a4bf36a48b5d4069cec6af9a87dp@chr17:34796428..34796430, -
3.07e-86FFCP PHASE1:Mm9::chr7:52781901..52781904,+#_e0395a4bf36a48b5d4069cec6af9a87dp@chr7:52781901..52781904, +
3.07e-86FFCP PHASE2:Mm9::chr1:186559285..186559288,+#_e0395a4bf36a48b5d4069cec6af9a87dp@chr1:186559285..186559288, +
3.07e-86FFCP PHASE2:Mm9::chr10:85585949..85585969,-#_e0395a4bf36a48b5d4069cec6af9a87dp@chr10:85585949..85585969, -
3.07e-86FFCP PHASE2:Mm9::chr16:85801525..85801529,-#_e0395a4bf36a48b5d4069cec6af9a87dp6@Adamts1
3.07e-86FFCP PHASE2:Mm9::chr18:38831400..38831402,-#_e0395a4bf36a48b5d4069cec6af9a87dp@chr18:38831400..38831402, -
3.07e-86FFCP PHASE2:Mm9::chr9:42915220..42915225,-#_e0395a4bf36a48b5d4069cec6af9a87dp@chr9:42915220..42915225, -
3.07e-86FFCP PHASE1:Mm9::chr4:62009160..62009164,-#_e0395a4bf36a48b5d4069cec6af9a87dp@chr4:62009160..62009164, -
3.07e-86FFCP PHASE2:Mm9::chr13:100000226..100000230,+#_e0395a4bf36a48b5d4069cec6af9a87dp@chr13:100000226..100000230, +
3.07e-86FFCP PHASE1:Mm9::chr9:45920408..45920437,-#_e0395a4bf36a48b5d4069cec6af9a87dp@chr9:45920408..45920437, -
3.07e-86FFCP PHASE1:Mm9::chr6:51831254..51831256,-#_e0395a4bf36a48b5d4069cec6af9a87dp@chr6:51831254..51831256, -
3.07e-86FFCP PHASE1:Mm9::chr5:64344878..64344887,-#_e0395a4bf36a48b5d4069cec6af9a87dp@chr5:64344878..64344887, -
3.07e-86FFCP PHASE2:Mm9::chr18:44793802..44793835,+#_e0395a4bf36a48b5d4069cec6af9a87dp@chr18:44793802..44793835, +
3.07e-86FFCP PHASE1:Mm9::chr17:48822294..48822295,-#_e0395a4bf36a48b5d4069cec6af9a87dp@chr17:48822294..48822295, -
3.07e-86FFCP PHASE2:Mm9::chr2:84756280..84756286,+#_e0395a4bf36a48b5d4069cec6af9a87dp@chr2:84756280..84756286, +
3.07e-86FFCP PHASE1:Mm9::chr11:115280630..115280662,+#_e0395a4bf36a48b5d4069cec6af9a87dp@chr11:115280630..115280662, +
3.07e-86FFCP PHASE1:Mm9::chr12:86691575..86691580,-#_e0395a4bf36a48b5d4069cec6af9a87dp@chr12:86691575..86691580, -
3.07e-86FFCP PHASE2:Mm9::chr17:12388232..12388237,+#_e0395a4bf36a48b5d4069cec6af9a87dp@chr17:12388232..12388237, +
3.07e-86FFCP PHASE1:Mm9::chr17:28107053..28107062,-#_e0395a4bf36a48b5d4069cec6af9a87dp@chr17:28107053..28107062, -
3.07e-86FFCP PHASE1:Mm9::chr13:113053257..113053258,+#_e0395a4bf36a48b5d4069cec6af9a87dp@chr13:113053257..113053258, +
3.07e-86FFCP PHASE1:Mm9::chr10:94580525..94580530,+#_e0395a4bf36a48b5d4069cec6af9a87dp@chr10:94580525..94580530, +
3.07e-86FFCP PHASE1:Mm9::chr16:30944451..30944485,+#_e0395a4bf36a48b5d4069cec6af9a87dp@chr16:30944451..30944485, +
3.07e-86FFCP PHASE2:Mm9::chr18:35881716..35881727,-#_e0395a4bf36a48b5d4069cec6af9a87dp@chr18:35881716..35881727, -
3.07e-86FFCP PHASE1:Mm9::chr12:8400090..8400093,+#_e0395a4bf36a48b5d4069cec6af9a87dp@chr12:8400090..8400093, +
3.07e-86FFCP PHASE1:Mm9::chr15:82209805..82209851,+#_e0395a4bf36a48b5d4069cec6af9a87dp@chr15:82209805..82209851, +
3.07e-86FFCP PHASE1:Mm9::chr11:88890706..88890745,+#_e0395a4bf36a48b5d4069cec6af9a87dp@chr11:88890706..88890745, +
3.07e-86FFCP PHASE1:Mm9::chr3:9705000..9705004,-#_e0395a4bf36a48b5d4069cec6af9a87dp4@Pag1
3.07e-86FFCP PHASE1:Mm9::chr18:4336287..4336296,-#_e0395a4bf36a48b5d4069cec6af9a87dp8@Map3k8
3.07e-86FFCP PHASE1:Mm9::chr13:100000226..100000230,+#_e0395a4bf36a48b5d4069cec6af9a87dp@chr13:100000226..100000230, +
3.07e-86FFCP PHASE1:Mm9::chr10:8586393..8586401,+#_e0395a4bf36a48b5d4069cec6af9a87dp@chr10:8586393..8586401, +
3.07e-86FFCP PHASE1:Mm9::chr17:35093764..35093773,-#_e0395a4bf36a48b5d4069cec6af9a87dp@chr17:35093764..35093773, -
3.07e-86FFCP PHASE2:Mm9::chr16:28911901..28911906,-#_e0395a4bf36a48b5d4069cec6af9a87dp@chr16:28911901..28911906, -
3.07e-86FFCP PHASE2:Mm9::chr15:59435855..59435878,-#_e0395a4bf36a48b5d4069cec6af9a87dp@chr15:59435855..59435878, -
3.07e-86FFCP PHASE2:Mm9::chr9:45920408..45920437,-#_e0395a4bf36a48b5d4069cec6af9a87dp@chr9:45920408..45920437, -
3.07e-86FFCP PHASE2:Mm9::chr16:30944451..30944485,+#_e0395a4bf36a48b5d4069cec6af9a87dp@chr16:30944451..30944485, +
3.07e-86FFCP PHASE2:Mm9::chr15:82209805..82209851,+#_e0395a4bf36a48b5d4069cec6af9a87dp@chr15:82209805..82209851, +
3.07e-86FFCP PHASE2:Mm9::chr16:11009028..11009039,+#_e0395a4bf36a48b5d4069cec6af9a87dp4@Gm4262
3.07e-86FFCP PHASE2:Mm9::chr11:109223779..109223789,-#_e0395a4bf36a48b5d4069cec6af9a87dp@chr11:109223779..109223789, -
3.07e-86FFCP PHASE2:Mm9::chr6:34549876..34549892,-#_e0395a4bf36a48b5d4069cec6af9a87dp@chr6:34549876..34549892, -
3.07e-86FFCP PHASE1:Mm9::chr18:35900327..35900366,+#_e0395a4bf36a48b5d4069cec6af9a87dp@chr18:35900327..35900366, +
3.07e-86FFCP PHASE1:Mm9::chr5:75375903..75375931,+#_e0395a4bf36a48b5d4069cec6af9a87dp@chr5:75375903..75375931, +
3.07e-86FFCP PHASE1:Mm9::chr16:11009028..11009039,+#_e0395a4bf36a48b5d4069cec6af9a87dp4@Gm4262
3.07e-86FFCP PHASE1:Mm9::chr8:89310639..89310641,-#_e0395a4bf36a48b5d4069cec6af9a87dp@chr8:89310639..89310641, -
3.07e-86FFCP PHASE1:Mm9::chr8:111108947..111108951,+#_e0395a4bf36a48b5d4069cec6af9a87dp@chr8:111108947..111108951, +
3.07e-86FFCP PHASE2:Mm9::chr2:133323630..133323631,+#_e0395a4bf36a48b5d4069cec6af9a87dp@chr2:133323630..133323631, +
3.07e-86FFCP PHASE1:Mm9::chr16:85801525..85801529,-#_e0395a4bf36a48b5d4069cec6af9a87dp6@Adamts1
3.07e-86FFCP PHASE2:Mm9::chr8:114123814..114123821,-#_e0395a4bf36a48b5d4069cec6af9a87dp@chr8:114123814..114123821, -
3.07e-86FFCP PHASE2:Mm9::chr12:86691575..86691580,-#_e0395a4bf36a48b5d4069cec6af9a87dp@chr12:86691575..86691580, -
3.07e-86FFCP PHASE2:Mm9::chr11:88890706..88890745,+#_e0395a4bf36a48b5d4069cec6af9a87dp@chr11:88890706..88890745, +
3.07e-86FFCP PHASE1:Mm9::chr9:42915220..42915225,-#_e0395a4bf36a48b5d4069cec6af9a87dp@chr9:42915220..42915225, -
3.07e-86FFCP PHASE2:Mm9::chr15:32178407..32178408,-#_e0395a4bf36a48b5d4069cec6af9a87dp@chr15:32178407..32178408, -
3.07e-86FFCP PHASE1:Mm9::chr9:62199266..62199267,+#_e0395a4bf36a48b5d4069cec6af9a87dp@chr9:62199266..62199267, +
3.07e-86FFCP PHASE2:Mm9::chr17:48822294..48822295,-#_e0395a4bf36a48b5d4069cec6af9a87dp@chr17:48822294..48822295, -
3.07e-86FFCP PHASE2:Mm9::chr17:28107053..28107062,-#_e0395a4bf36a48b5d4069cec6af9a87dp@chr17:28107053..28107062, -
3.07e-86FFCP PHASE1:Mm9::chr6:129180613..129180616,+#_e0395a4bf36a48b5d4069cec6af9a87dp@chr6:129180613..129180616, +
3.07e-86FFCP PHASE2:Mm9::chr18:5125608..5125613,+#_e0395a4bf36a48b5d4069cec6af9a87dp@chr18:5125608..5125613, +
3.07e-86FFCP PHASE1:Mm9::chr11:109223756..109223764,-#_e0395a4bf36a48b5d4069cec6af9a87dp@chr11:109223756..109223764, -
3.07e-86FFCP PHASE2:Mm9::chr15:97402708..97402712,+#_e0395a4bf36a48b5d4069cec6af9a87dp@chr15:97402708..97402712, +
3.07e-86FFCP PHASE2:Mm9::chr4:43407825..43407830,+#_e0395a4bf36a48b5d4069cec6af9a87dp@chr4:43407825..43407830, +
3.07e-86FFCP PHASE1:Mm9::chr6:48398664..48398684,-#_e0395a4bf36a48b5d4069cec6af9a87dp@chr6:48398664..48398684, -
3.07e-86FFCP PHASE1:Mm9::chr15:88669906..88669914,+#_e0395a4bf36a48b5d4069cec6af9a87dp@chr15:88669906..88669914, +
3.07e-86FFCP PHASE1:Mm9::chr1:137570295..137570315,+#_e0395a4bf36a48b5d4069cec6af9a87dp@chr1:137570295..137570315, +
3.07e-86FFCP PHASE2:Mm9::chr11:54785454..54785456,-#_e0395a4bf36a48b5d4069cec6af9a87dp@chr11:54785454..54785456, -
3.07e-86FFCP PHASE1:Mm9::chr18:5125608..5125613,+#_e0395a4bf36a48b5d4069cec6af9a87dp@chr18:5125608..5125613, +
3.07e-86FFCP PHASE1:Mm9::chr10:93819538..93819549,+#_e0395a4bf36a48b5d4069cec6af9a87dp@chr10:93819538..93819549, +
3.07e-86FFCP PHASE1:Mm9::chr17:35106363..35106372,-#_e0395a4bf36a48b5d4069cec6af9a87dp@chr17:35106363..35106372, -
3.07e-86FFCP PHASE1:Mm9::chr17:67870501..67870507,+#_e0395a4bf36a48b5d4069cec6af9a87dp@chr17:67870501..67870507, +
3.07e-86FFCP PHASE1:Mm9::chr12:81955014..81955018,+#_e0395a4bf36a48b5d4069cec6af9a87dp@chr12:81955014..81955018, +
3.07e-86FFCP PHASE2:Mm9::chr4:86335502..86335509,+#_e0395a4bf36a48b5d4069cec6af9a87dp@chr4:86335502..86335509, +
3.07e-86FFCP PHASE1:Mm9::chr11:119254092..119254100,-#_e0395a4bf36a48b5d4069cec6af9a87dp@chr11:119254092..119254100, -
3.07e-86FFCP PHASE1:Mm9::chr10:85586219..85586227,+#_e0395a4bf36a48b5d4069cec6af9a87dp@chr10:85586219..85586227, +
3.07e-86FFCP PHASE1:Mm9::chr17:34798555..34798562,+#_e0395a4bf36a48b5d4069cec6af9a87dp@chr17:34798555..34798562, +
3.07e-86FFCP PHASE1:Mm9::chr6:15678147..15678149,-#_e0395a4bf36a48b5d4069cec6af9a87dp@chr6:15678147..15678149, -
3.07e-86FFCP PHASE1:Mm9::chr16:91441786..91441787,-#_e0395a4bf36a48b5d4069cec6af9a87dp@chr16:91441786..91441787, -
3.07e-86FFCP PHASE1:Mm9::chr11:117737077..117737096,-#_e0395a4bf36a48b5d4069cec6af9a87dp@chr11:117737077..117737096, -
3.07e-86FFCP PHASE2:Mm9::chr8:114250006..114250039,-#_e0395a4bf36a48b5d4069cec6af9a87dp@chr8:114250006..114250039, -
3.07e-86FFCP PHASE2:Mm9::chr17:35096519..35096524,+#_e0395a4bf36a48b5d4069cec6af9a87dp@chr17:35096519..35096524, +
3.07e-86FFCP PHASE2:Mm9::chr8:86713876..86713879,+#_e0395a4bf36a48b5d4069cec6af9a87dp@chr8:86713876..86713879, +
3.07e-86FFCP PHASE1:Mm9::chr7:118133901..118133904,-#_e0395a4bf36a48b5d4069cec6af9a87dp@chr7:118133901..118133904, -
3.07e-86FFCP PHASE2:Mm9::chr5:114422970..114422985,-#_e0395a4bf36a48b5d4069cec6af9a87dp@chr5:114422970..114422985, -
3.07e-86FFCP PHASE2:Mm9::chr13:113554186..113554192,+#_e0395a4bf36a48b5d4069cec6af9a87dp@chr13:113554186..113554192, +
3.07e-86FFCP PHASE1:Mm9::chr7:109031260..109031268,+#_e0395a4bf36a48b5d4069cec6af9a87dp@chr7:109031260..109031268, +
3.07e-86FFCP PHASE1:Mm9::chr17:35945332..35945335,+#_e0395a4bf36a48b5d4069cec6af9a87dp@chr17:35945332..35945335, +
3.07e-86FFCP PHASE2:Mm9::chr15:90508949..90508955,-#_e0395a4bf36a48b5d4069cec6af9a87dp@chr15:90508949..90508955, -
3.07e-86FFCP PHASE2:Mm9::chr12:100752983..100752984,+#_e0395a4bf36a48b5d4069cec6af9a87dp@chr12:100752983..100752984, +
3.07e-86FFCP PHASE1:Mm9::chr12:85288471..85288502,+#_e0395a4bf36a48b5d4069cec6af9a87dp@chr12:85288471..85288502, +
3.07e-86FFCP PHASE2:Mm9::chr1:132405466..132405470,+#_e0395a4bf36a48b5d4069cec6af9a87dp@chr1:132405466..132405470, +
3.07e-86FFCP PHASE1:Mm9::chr5:32912678..32912687,+#_e0395a4bf36a48b5d4069cec6af9a87dp@chr5:32912678..32912687, +
3.07e-86FFCP PHASE2:Mm9::chr17:34796428..34796430,-#_e0395a4bf36a48b5d4069cec6af9a87dp@chr17:34796428..34796430, -
3.07e-86FFCP PHASE1:Mm9::chr4:100890388..100890423,+#_e0395a4bf36a48b5d4069cec6af9a87dp@chr4:100890388..100890423, +
3.07e-86FFCP PHASE2:Mm9::chr5:64344878..64344887,-#_e0395a4bf36a48b5d4069cec6af9a87dp@chr5:64344878..64344887, -
3.07e-86FFCP PHASE1:Mm9::chr6:91441074..91441080,-#_e0395a4bf36a48b5d4069cec6af9a87dp@chr6:91441074..91441080, -
3.07e-86FFCP PHASE1:Mm9::chr17:35094068..35094092,-#_e0395a4bf36a48b5d4069cec6af9a87dp@chr17:35094068..35094092, -
3.07e-86FFCP PHASE2:Mm9::chr11:107196799..107196814,+#_e0395a4bf36a48b5d4069cec6af9a87dp@chr11:107196799..107196814, +

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