Personal tools

CL:0002231: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(2 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{CL
{{CL
|id=CL:0002231
|alt_id=CL:1000295;;CL:1000408
|name=epithelial cell of prostate
|namespace=cell
|def="An epithelial cell of the prostate." [GOC:tfm]
|xref=FMA:256163;;FMA:66817
|is_a=CL:0002076
|synonym="prostate epithelial cell" EXACT []
|comment=
|comment=
|alt_id=CL:1000295;;CL:1000408
|disjoint_from=
|union_of=
|created_by=tmeehan
|created_by=tmeehan
|obo_creation_date=2010-09-07T01:49:29Z
|def="An epithelial cell of the prostate." [GOC:tfm]
|subset=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=CL:0002231
|is_a=CL:0002076
|is_obsolete=
|located_in=
|located_in=
|part_of=
|name=epithelial cell of prostate
|namespace=FANTOM
|obo_creation_date=2010-09-07T01:49:29Z
|part_of=UBERON:0002367
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.owl;;IAO:0000412 http://purl.obolibrary.org/obo/cl.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.owl;;IAO:0000412 http://purl.obolibrary.org/obo/cl.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym="prostate epithelial cell" EXACT []
|union_of=
|xref=FMA:256163;;FMA:66817
}}
}}

Latest revision as of 16:41, 12 September 2014

Name:epithelial cell of prostate
Namespace:FANTOM
Definition:"An epithelial cell of the prostate." [GOC:tfm]
Xrefs:
links:

FMA:256163

FMA:66817
Synonyms: "prostate epithelial cell" EXACT []
Alt_id: CL:1000295
CL:1000408
Created by:tmeehan
Creation date:2010-09-07T01:49:29Z


Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:CL:0002076(endo-epithelial cell)
part_of:UBERON:0002367(prostate gland)



Children


derives from:FF:0000145 (human prostate epithelial cell sample)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.

Human (Homo sapiens)

Mouse (Mus musculus)


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002231 (epithelial cell of prostate), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
6.24e-88FFCP PHASE1:Hg19::chr2:20402266..20402279,-#_57badb63132690fb62f9429d1ec67fc6p@chr2:20402266..20402279, -
6.24e-88FFCP PHASE2:Hg19::chr2:20402266..20402279,-#_57badb63132690fb62f9429d1ec67fc6p@chr2:20402266..20402279, -
6.24e-88FFCP PHASE1:Hg19::chr8:95683679..95683696,+#_57badb63132690fb62f9429d1ec67fc6p@chr8:95683679..95683696, +
6.24e-88FFCP PHASE2:Hg19::chr7:75958094..75958103,-#_57badb63132690fb62f9429d1ec67fc6p@chr7:75958094..75958103, -
6.24e-88FFCP PHASE2:Hg19::chr8:95683679..95683696,+#_57badb63132690fb62f9429d1ec67fc6p@chr8:95683679..95683696, +
6.24e-88FFCP PHASE1:Hg19::chr7:75958094..75958103,-#_57badb63132690fb62f9429d1ec67fc6p@chr7:75958094..75958103, -
2.39e-66FFCP PHASE1:Hg19::chr1:209605353..209605359,+#_389a2e3e769517010bbbc6df3dc92b2fp2@MIR205, p5@MIR205HG
2.39e-66FFCP PHASE2:Hg19::chr1:209605353..209605359,+#_389a2e3e769517010bbbc6df3dc92b2fp2@MIR205, p5@MIR205HG
2.39e-66FFCP PHASE1:Hg19::chr6:52617751..52617757,-#_389a2e3e769517010bbbc6df3dc92b2fp@chr6:52617751..52617757, -
2.39e-66FFCP PHASE2:Hg19::chr6:52617751..52617757,-#_389a2e3e769517010bbbc6df3dc92b2fp@chr6:52617751..52617757, -
2.39e-66FFCP PHASE1:Hg19::chr13:42179544..42179550,-#_389a2e3e769517010bbbc6df3dc92b2fp@chr13:42179544..42179550, -
2.39e-66FFCP PHASE1:Hg19::chr19:51522377..51522384,-#_389a2e3e769517010bbbc6df3dc92b2fp14@KLK10
2.39e-66FFCP PHASE2:Hg19::chr19:51522377..51522384,-#_389a2e3e769517010bbbc6df3dc92b2fp14@KLK10
2.39e-66FFCP PHASE2:Hg19::chr4:6695726..6695733,+#_389a2e3e769517010bbbc6df3dc92b2fp5@S100P
2.39e-66FFCP PHASE1:Hg19::chr19:51517970..51517977,-#_389a2e3e769517010bbbc6df3dc92b2fp9@AK026045
2.39e-66FFCP PHASE1:Hg19::chr2:219136246..219136252,-#_389a2e3e769517010bbbc6df3dc92b2fp@chr2:219136246..219136252, -
2.39e-66FFCP PHASE2:Hg19::chr19:51517970..51517977,-#_389a2e3e769517010bbbc6df3dc92b2fp9@AK026045
2.39e-66FFCP PHASE2:Hg19::chr2:219136246..219136252,-#_389a2e3e769517010bbbc6df3dc92b2fp@chr2:219136246..219136252, -
2.39e-66FFCP PHASE1:Hg19::chr4:6695726..6695733,+#_389a2e3e769517010bbbc6df3dc92b2fp5@S100P
2.39e-66FFCP PHASE2:Hg19::chr13:42179544..42179550,-#_389a2e3e769517010bbbc6df3dc92b2fp@chr13:42179544..42179550, -
3.35e-66FFCP PHASE1:Hg19::chr17:2282209..2282210,+#_02e7275bc060ba1d950fbe3d6f4ea974p@chr17:2282209..2282210, +
3.35e-66FFCP PHASE2:Hg19::chr17:2282209..2282210,+#_02e7275bc060ba1d950fbe3d6f4ea974p@chr17:2282209..2282210, +
1.53e-44FFCP PHASE1:Hg19::chr1:246588844..246588855,-#_9aff91d6dc29f9ddf0f15e661c376b9dp@chr1:246588844..246588855, -
1.53e-44FFCP PHASE2:Hg19::chr1:246588844..246588855,-#_9aff91d6dc29f9ddf0f15e661c376b9dp@chr1:246588844..246588855, -
1.84e-38FFCP PHASE1:Hg19::chr6:30864435..30864457,+#_8af3d7ffb58611f9eb215907e8daed0ap23@DDR1
1.84e-38FFCP PHASE2:Hg19::chr6:30864435..30864457,+#_8af3d7ffb58611f9eb215907e8daed0ap23@DDR1
3.94e-38FFCP PHASE1:Hg19::chr16:68847238..68847250,+#_d8829007cded8e1f19abeb98e3c63fd8p@chr16:68847238..68847250, +
3.94e-38FFCP PHASE2:Hg19::chr16:68847238..68847250,+#_d8829007cded8e1f19abeb98e3c63fd8p@chr16:68847238..68847250, +
4.27e-34FFCP PHASE1:Hg19::chr3:99796216..99796219,-#_658919f25782441f66dc0cf5fe5d38b2p@chr3:99796216..99796219, -
4.27e-34FFCP PHASE1:Hg19::chr6:56483677..56483688,-#_658919f25782441f66dc0cf5fe5d38b2p138@DST
4.27e-34FFCP PHASE2:Hg19::chr3:99796216..99796219,-#_658919f25782441f66dc0cf5fe5d38b2p@chr3:99796216..99796219, -
4.27e-34FFCP PHASE2:Hg19::chr6:56483677..56483688,-#_658919f25782441f66dc0cf5fe5d38b2p138@DST
4.27e-34FFCP PHASE1:Hg19::chr4:140048091..140048100,-#_658919f25782441f66dc0cf5fe5d38b2p@chr4:140048091..140048100, -
4.27e-34FFCP PHASE2:Hg19::chr12:24768892..24768895,-#_658919f25782441f66dc0cf5fe5d38b2p@chr12:24768892..24768895, -
4.27e-34FFCP PHASE2:Hg19::chr4:140048091..140048100,-#_658919f25782441f66dc0cf5fe5d38b2p@chr4:140048091..140048100, -
4.27e-34FFCP PHASE1:Hg19::chr12:24768892..24768895,-#_658919f25782441f66dc0cf5fe5d38b2p@chr12:24768892..24768895, -
4.27e-34FFCP PHASE2:Hg19::chr16:64527759..64527763,-#_658919f25782441f66dc0cf5fe5d38b2p@chr16:64527759..64527763, -
4.27e-34FFCP PHASE1:Hg19::chrX:42850716..42850719,+#_658919f25782441f66dc0cf5fe5d38b2p@chrX:42850716..42850719, +
4.27e-34FFCP PHASE2:Hg19::chrX:42850716..42850719,+#_658919f25782441f66dc0cf5fe5d38b2p@chrX:42850716..42850719, +
4.27e-34FFCP PHASE1:Hg19::chr4:140048110..140048120,-#_658919f25782441f66dc0cf5fe5d38b2p@chr4:140048110..140048120, -
4.27e-34FFCP PHASE2:Hg19::chr4:140048110..140048120,-#_658919f25782441f66dc0cf5fe5d38b2p@chr4:140048110..140048120, -
4.27e-34FFCP PHASE1:Hg19::chr4:121930371..121930408,+#_658919f25782441f66dc0cf5fe5d38b2p@chr4:121930371..121930408, +
4.27e-34FFCP PHASE2:Hg19::chr4:121930371..121930408,+#_658919f25782441f66dc0cf5fe5d38b2p@chr4:121930371..121930408, +
4.27e-34FFCP PHASE1:Hg19::chr9:124463041..124463047,+#_658919f25782441f66dc0cf5fe5d38b2p@chr9:124463041..124463047, +
4.27e-34FFCP PHASE2:Hg19::chr9:124463041..124463047,+#_658919f25782441f66dc0cf5fe5d38b2p@chr9:124463041..124463047, +
4.27e-34FFCP PHASE1:Hg19::chr16:64527759..64527763,-#_658919f25782441f66dc0cf5fe5d38b2p@chr16:64527759..64527763, -
4.27e-34FFCP PHASE1:Hg19::chr9:130915652..130915657,+#_658919f25782441f66dc0cf5fe5d38b2p@chr9:130915652..130915657, +
4.27e-34FFCP PHASE2:Hg19::chr9:130915652..130915657,+#_658919f25782441f66dc0cf5fe5d38b2p@chr9:130915652..130915657, +
5.96e-34FFCP PHASE2:Hg19::chr15:71740021..71740037,+#_b2be386d5139d627c9b82cfc7a97dccap@chr15:71740021..71740037, +
5.96e-34FFCP PHASE1:Hg19::chr7:116371834..116371841,+#_b2be386d5139d627c9b82cfc7a97dccap@chr7:116371834..116371841, +
5.96e-34FFCP PHASE1:Hg19::chr15:71740021..71740037,+#_b2be386d5139d627c9b82cfc7a97dccap@chr15:71740021..71740037, +
5.96e-34FFCP PHASE2:Hg19::chr2:108932073..108932081,-#_b2be386d5139d627c9b82cfc7a97dccap@chr2:108932073..108932081, -
5.96e-34FFCP PHASE2:Hg19::chr7:116371834..116371841,+#_b2be386d5139d627c9b82cfc7a97dccap@chr7:116371834..116371841, +
5.96e-34FFCP PHASE1:Hg19::chr2:108932073..108932081,-#_b2be386d5139d627c9b82cfc7a97dccap@chr2:108932073..108932081, -
5.96e-34FFCP PHASE1:Hg19::chr9:138591341..138591346,-#_b2be386d5139d627c9b82cfc7a97dccap3@SOHLH1
5.96e-34FFCP PHASE2:Hg19::chr9:138591341..138591346,-#_b2be386d5139d627c9b82cfc7a97dccap3@SOHLH1
5.96e-34FFCP PHASE2:Hg19::chr8:116684676..116684688,-#_b2be386d5139d627c9b82cfc7a97dccap@chr8:116684676..116684688, -
5.96e-34FFCP PHASE1:Hg19::chr8:116684676..116684688,-#_b2be386d5139d627c9b82cfc7a97dccap@chr8:116684676..116684688, -
5.96e-34FFCP PHASE2:Hg19::chr8:119760950..119760956,-#_b2be386d5139d627c9b82cfc7a97dccap@chr8:119760950..119760956, -
5.96e-34FFCP PHASE1:Hg19::chr8:119760950..119760956,-#_b2be386d5139d627c9b82cfc7a97dccap@chr8:119760950..119760956, -
5.96e-34FFCP PHASE1:Hg19::chr3:57993817..57993820,+#_b2be386d5139d627c9b82cfc7a97dccap9@FLNB
5.96e-34FFCP PHASE2:Hg19::chr3:57993817..57993820,+#_b2be386d5139d627c9b82cfc7a97dccap9@FLNB
5.96e-34FFCP PHASE1:Hg19::chr6:47695497..47695505,-#_b2be386d5139d627c9b82cfc7a97dccap@chr6:47695497..47695505, -
5.96e-34FFCP PHASE1:Hg19::chrX:153603415..153603426,-#_b2be386d5139d627c9b82cfc7a97dccap119@FLNA
5.96e-34FFCP PHASE2:Hg19::chrX:153603415..153603426,-#_b2be386d5139d627c9b82cfc7a97dccap119@FLNA
5.96e-34FFCP PHASE2:Hg19::chr6:47695497..47695505,-#_b2be386d5139d627c9b82cfc7a97dccap@chr6:47695497..47695505, -
3.59e-30FFCP PHASE1:Hg19::chr1:209827344..209827383,-#_3e19c1abb9028d48251325be1c34d775p@chr1:209827344..209827383, -
3.59e-30FFCP PHASE2:Hg19::chr1:209827344..209827383,-#_3e19c1abb9028d48251325be1c34d775p@chr1:209827344..209827383, -
2.64e-29FFCP PHASE2:Hg19::chr16:68856086..68856095,+#_b436cb8b2d6a88c071404845f098d24dp@chr16:68856086..68856095, +
2.64e-29FFCP PHASE1:Hg19::chr16:68856086..68856095,+#_b436cb8b2d6a88c071404845f098d24dp@chr16:68856086..68856095, +
1.59e-27FFCP PHASE1:Hg19::chr17:38645088..38645099,-#_166a7c920c70f39a17f29028ecf89b69p20@TNS4
1.59e-27FFCP PHASE2:Hg19::chr17:38645088..38645099,-#_166a7c920c70f39a17f29028ecf89b69p20@TNS4
1.82e-27FFCP PHASE1:Hg19::chr17:38652332..38652344,-#_a3017dc019919a31aba65951f1846953p18@TNS4
1.82e-27FFCP PHASE2:Hg19::chr17:38652332..38652344,-#_a3017dc019919a31aba65951f1846953p18@TNS4
3.56e-27FFCP PHASE1:Hg19::chr1:935277..935309,-#_6ae3327078002def600b714fd4940726p6@HES4
3.56e-27FFCP PHASE2:Hg19::chr1:935277..935309,-#_6ae3327078002def600b714fd4940726p6@HES4
1.71e-25FFCP PHASE2:Hg19::chr16:68862146..68862167,+#_fb2aeeb429a861c6d7b4f406c5f2766bp@chr16:68862146..68862167, +
1.71e-25FFCP PHASE1:Hg19::chr16:68862146..68862167,+#_fb2aeeb429a861c6d7b4f406c5f2766bp@chr16:68862146..68862167, +
1.83e-25FFCP PHASE2:Hg19::chr22:38321975..38321988,+#_3fa612ce462b62fc02450b6d9d472d3fp@chr22:38321975..38321988, +
1.83e-25FFCP PHASE1:Hg19::chr22:38321975..38321988,+#_3fa612ce462b62fc02450b6d9d472d3fp@chr22:38321975..38321988, +
1.83e-25FFCP PHASE1:Hg19::chr6:83075334..83075346,+#_3fa612ce462b62fc02450b6d9d472d3fp@chr6:83075334..83075346, +
1.83e-25FFCP PHASE2:Hg19::chr6:83075334..83075346,+#_3fa612ce462b62fc02450b6d9d472d3fp@chr6:83075334..83075346, +
4.87e-25FFCP PHASE1:Hg19::chr6:56485258..56485269,-#_a7204578dd1664432b502fbf733571fbp@chr6:56485258..56485269, -
4.87e-25FFCP PHASE2:Hg19::chr6:56485258..56485269,-#_a7204578dd1664432b502fbf733571fbp@chr6:56485258..56485269, -
6.22e-25FFCP PHASE1:Hg19::chr17:39778698..39778748,-#_f20ba2fc1bf7242e0310ae9b748c47d1p@chr17:39778698..39778748, -
6.22e-25FFCP PHASE2:Hg19::chr17:39778698..39778748,-#_f20ba2fc1bf7242e0310ae9b748c47d1p@chr17:39778698..39778748, -
1.4e-24FFCP PHASE1:Hg19::chr15:41146665..41146689,+#_6502a3f9c9d667f23d9ca25badce8639p@chr15:41146665..41146689, +
1.4e-24FFCP PHASE2:Hg19::chr15:41146665..41146689,+#_6502a3f9c9d667f23d9ca25badce8639p@chr15:41146665..41146689, +
1.54e-24FFCP PHASE1:Hg19::chr7:6057478..6057494,+#_1a0c46406e036ae33f6c6840841eba22p@chr7:6057478..6057494, +
1.54e-24FFCP PHASE2:Hg19::chr7:6057478..6057494,+#_1a0c46406e036ae33f6c6840841eba22p@chr7:6057478..6057494, +
1.34e-23FFCP PHASE1:Hg19::chr19:2046441..2046457,-#_e40ab074d65322318da763c141686036p20@MKNK2
1.34e-23FFCP PHASE2:Hg19::chr19:2046441..2046457,-#_e40ab074d65322318da763c141686036p20@MKNK2
2.62e-23FFCP PHASE2:Hg19::chr14:100485939..100485950,+#_4c70d8a4839bcd071045dddae6f0a3d0p41@EVL
2.62e-23FFCP PHASE1:Hg19::chr16:2811988..2811995,+#_4c70d8a4839bcd071045dddae6f0a3d0p@chr16:2811988..2811995, +
2.62e-23FFCP PHASE1:Hg19::chr2:28340361..28340371,+#_4c70d8a4839bcd071045dddae6f0a3d0p@chr2:28340361..28340371, +
2.62e-23FFCP PHASE1:Hg19::chr19:51517928..51517936,-#_4c70d8a4839bcd071045dddae6f0a3d0p2@AK026045
2.62e-23FFCP PHASE2:Hg19::chr2:28340361..28340371,+#_4c70d8a4839bcd071045dddae6f0a3d0p@chr2:28340361..28340371, +
2.62e-23FFCP PHASE1:Hg19::chr19:49130770..49130779,+#_4c70d8a4839bcd071045dddae6f0a3d0p@chr19:49130770..49130779, +
2.62e-23FFCP PHASE1:Hg19::chr7:142940347..142940351,+#_4c70d8a4839bcd071045dddae6f0a3d0p@chr7:142940347..142940351, +
2.62e-23FFCP PHASE2:Hg19::chr19:51517928..51517936,-#_4c70d8a4839bcd071045dddae6f0a3d0p2@AK026045

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=CL:0002231&oldid=3275432"