Personal tools

CL:0002097: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
Line 18: Line 18:
|has_quality=
|has_quality=
|located_in=
|located_in=
|part_of=
|part_of=UBERON:0001235
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.owl;;IAO:0000412 http://purl.obolibrary.org/obo/cl.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.owl;;IAO:0000412 http://purl.obolibrary.org/obo/cl.owl
|is_obsolete=
|is_obsolete=
|preceded_by=
|preceded_by=
}}
}}

Latest revision as of 13:03, 27 June 2012

Name:cortical cell of adrenal gland
Namespace:cell
Definition:"A cell of the adrenal cortex. Cell types include those that synthesize and secrete chemical derivatives (steroids) of cholesterol." [GOC:tfm]
Xrefs:
links:
FMA:69545
Synonyms: "adrenal cortex cell" EXACT []
"adrenocortical cell" EXACT []
Created by:tmeehan
Creation date:2010-08-24T01:37:44Z


Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:CL:0000150(glandular epithelial cell),CL:0000174(steroid hormone secreting cell),CL:0002078(meso-epithelial cell)
part_of:UBERON:0001235(adrenal cortex)



Children


is a:FF:0000007 (adrenal cortex cell),FF:0102219 (adrenocortical carcinoma cell)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.

Human (Homo sapiens)

Mouse (Mus musculus)


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002097 (cortical cell of adrenal gland), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
1.55e-98FFCP PHASE2:Hg19::chr3:191075256..191075261,+#_0b8f637baccada41eb3b0520255e668ap@chr3:191075256..191075261, +
1.55e-98FFCP PHASE1:Hg19::chr5:107631924..107631930,-#_0b8f637baccada41eb3b0520255e668ap@chr5:107631924..107631930, -
1.55e-98FFCP PHASE2:Hg19::chr7:80365917..80365926,-#_0b8f637baccada41eb3b0520255e668ap@chr7:80365917..80365926, -
1.55e-98FFCP PHASE2:Hg19::chr16:33408291..33408306,+#_0b8f637baccada41eb3b0520255e668ap@chr16:33408291..33408306, +
1.55e-98FFCP PHASE1:Hg19::chr3:165535021..165535029,-#_0b8f637baccada41eb3b0520255e668ap@chr3:165535021..165535029, -
1.55e-98FFCP PHASE2:Hg19::chr1:197099062..197099073,-#_0b8f637baccada41eb3b0520255e668ap@chr1:197099062..197099073, -
1.55e-98FFCP PHASE1:Hg19::chr7:152166833..152166847,+#_0b8f637baccada41eb3b0520255e668ap@chr7:152166833..152166847, +
1.55e-98FFCP PHASE2:Hg19::chr18:47407103..47407112,-#_0b8f637baccada41eb3b0520255e668ap@chr18:47407103..47407112, -
1.55e-98FFCP PHASE2:Hg19::chr3:165535021..165535029,-#_0b8f637baccada41eb3b0520255e668ap@chr3:165535021..165535029, -
1.55e-98FFCP PHASE1:Hg19::chr7:80365936..80365942,-#_0b8f637baccada41eb3b0520255e668ap@chr7:80365936..80365942, -
1.55e-98FFCP PHASE2:Hg19::chr5:107631933..107631940,-#_0b8f637baccada41eb3b0520255e668ap@chr5:107631933..107631940, -
1.55e-98FFCP PHASE2:Hg19::chr7:152166833..152166847,+#_0b8f637baccada41eb3b0520255e668ap@chr7:152166833..152166847, +
1.55e-98FFCP PHASE1:Hg19::chr1:197099076..197099083,-#_0b8f637baccada41eb3b0520255e668ap@chr1:197099076..197099083, -
1.55e-98FFCP PHASE1:Hg19::chr7:33397752..33397755,+#_0b8f637baccada41eb3b0520255e668ap@chr7:33397752..33397755, +
1.55e-98FFCP PHASE1:Hg19::chr4:106656882..106656914,+#_0b8f637baccada41eb3b0520255e668ap@chr4:106656882..106656914, +
1.55e-98FFCP PHASE2:Hg19::chrY:8692267..8692276,-#_0b8f637baccada41eb3b0520255e668ap@chrY:8692267..8692276, -
1.55e-98FFCP PHASE1:Hg19::chr5:107631933..107631940,-#_0b8f637baccada41eb3b0520255e668ap@chr5:107631933..107631940, -
1.55e-98FFCP PHASE1:Hg19::chr17:8639180..8639188,-#_0b8f637baccada41eb3b0520255e668ap@chr17:8639180..8639188, -
1.55e-98FFCP PHASE2:Hg19::chr7:80365936..80365942,-#_0b8f637baccada41eb3b0520255e668ap@chr7:80365936..80365942, -
1.55e-98FFCP PHASE2:Hg19::chr7:33397752..33397755,+#_0b8f637baccada41eb3b0520255e668ap@chr7:33397752..33397755, +
1.55e-98FFCP PHASE2:Hg19::chr4:106656882..106656914,+#_0b8f637baccada41eb3b0520255e668ap@chr4:106656882..106656914, +
1.55e-98FFCP PHASE1:Hg19::chrY:8692267..8692276,-#_0b8f637baccada41eb3b0520255e668ap@chrY:8692267..8692276, -
1.55e-98FFCP PHASE2:Hg19::chr1:197099076..197099083,-#_0b8f637baccada41eb3b0520255e668ap@chr1:197099076..197099083, -
1.55e-98FFCP PHASE2:Hg19::chr3:111812180..111812186,+#_0b8f637baccada41eb3b0520255e668ap@chr3:111812180..111812186, +
1.55e-98FFCP PHASE1:Hg19::chr17:4847813..4847819,+#_0b8f637baccada41eb3b0520255e668ap@chr17:4847813..4847819, +
1.55e-98FFCP PHASE1:Hg19::chr3:111812180..111812186,+#_0b8f637baccada41eb3b0520255e668ap@chr3:111812180..111812186, +
1.55e-98FFCP PHASE2:Hg19::chr5:107631942..107631951,-#_0b8f637baccada41eb3b0520255e668ap@chr5:107631942..107631951, -
1.55e-98FFCP PHASE1:Hg19::chr5:107631942..107631951,-#_0b8f637baccada41eb3b0520255e668ap@chr5:107631942..107631951, -
1.55e-98FFCP PHASE1:Hg19::chr18:39541931..39541944,+#_0b8f637baccada41eb3b0520255e668ap@chr18:39541931..39541944, +
1.55e-98FFCP PHASE2:Hg19::chr5:13428853..13428866,+#_0b8f637baccada41eb3b0520255e668ap@chr5:13428853..13428866, +
1.55e-98FFCP PHASE2:Hg19::chr17:8639180..8639188,-#_0b8f637baccada41eb3b0520255e668ap@chr17:8639180..8639188, -
1.55e-98FFCP PHASE2:Hg19::chr11:22707203..22707221,+#_0b8f637baccada41eb3b0520255e668ap@chr11:22707203..22707221, +
1.55e-98FFCP PHASE1:Hg19::chr5:13428853..13428866,+#_0b8f637baccada41eb3b0520255e668ap@chr5:13428853..13428866, +
1.55e-98FFCP PHASE2:Hg19::chr2:123706107..123706109,-#_0b8f637baccada41eb3b0520255e668ap@chr2:123706107..123706109, -
1.55e-98FFCP PHASE1:Hg19::chr16:33408291..33408306,+#_0b8f637baccada41eb3b0520255e668ap@chr16:33408291..33408306, +
1.55e-98FFCP PHASE1:Hg19::chr3:191075031..191075040,+#_0b8f637baccada41eb3b0520255e668ap@chr3:191075031..191075040, +
1.55e-98FFCP PHASE1:Hg19::chr2:123706107..123706109,-#_0b8f637baccada41eb3b0520255e668ap@chr2:123706107..123706109, -
1.55e-98FFCP PHASE1:Hg19::chr7:80365907..80365910,-#_0b8f637baccada41eb3b0520255e668ap@chr7:80365907..80365910, -
1.55e-98FFCP PHASE2:Hg19::chr17:4847813..4847819,+#_0b8f637baccada41eb3b0520255e668ap@chr17:4847813..4847819, +
1.55e-98FFCP PHASE1:Hg19::chr18:47407103..47407112,-#_0b8f637baccada41eb3b0520255e668ap@chr18:47407103..47407112, -
1.55e-98FFCP PHASE1:Hg19::chr11:22707203..22707221,+#_0b8f637baccada41eb3b0520255e668ap@chr11:22707203..22707221, +
1.55e-98FFCP PHASE2:Hg19::chr3:191075031..191075040,+#_0b8f637baccada41eb3b0520255e668ap@chr3:191075031..191075040, +
1.55e-98FFCP PHASE2:Hg19::chr7:80365907..80365910,-#_0b8f637baccada41eb3b0520255e668ap@chr7:80365907..80365910, -
1.55e-98FFCP PHASE1:Hg19::chr3:165535017..165535020,-#_0b8f637baccada41eb3b0520255e668ap@chr3:165535017..165535020, -
1.55e-98FFCP PHASE1:Hg19::chr7:152166747..152166750,+#_0b8f637baccada41eb3b0520255e668ap@chr7:152166747..152166750, +
1.55e-98FFCP PHASE2:Hg19::chr18:39541931..39541944,+#_0b8f637baccada41eb3b0520255e668ap@chr18:39541931..39541944, +
1.55e-98FFCP PHASE2:Hg19::chr5:80434077..80434082,+#_0b8f637baccada41eb3b0520255e668ap@chr5:80434077..80434082, +
1.55e-98FFCP PHASE1:Hg19::chr3:191075256..191075261,+#_0b8f637baccada41eb3b0520255e668ap@chr3:191075256..191075261, +
1.55e-98FFCP PHASE2:Hg19::chr3:165535017..165535020,-#_0b8f637baccada41eb3b0520255e668ap@chr3:165535017..165535020, -
1.55e-98FFCP PHASE1:Hg19::chr7:80365917..80365926,-#_0b8f637baccada41eb3b0520255e668ap@chr7:80365917..80365926, -
1.55e-98FFCP PHASE2:Hg19::chr5:107631924..107631930,-#_0b8f637baccada41eb3b0520255e668ap@chr5:107631924..107631930, -
1.55e-98FFCP PHASE2:Hg19::chr7:152166747..152166750,+#_0b8f637baccada41eb3b0520255e668ap@chr7:152166747..152166750, +
1.55e-98FFCP PHASE1:Hg19::chr1:197099062..197099073,-#_0b8f637baccada41eb3b0520255e668ap@chr1:197099062..197099073, -
1.55e-98FFCP PHASE1:Hg19::chr5:80434077..80434082,+#_0b8f637baccada41eb3b0520255e668ap@chr5:80434077..80434082, +
2.74e-50FFCP PHASE1:Hg19::chr6:168251039..168251042,+#_bbed4a315d4fa84c34e047bc2362732ep@chr6:168251039..168251042, +
2.74e-50FFCP PHASE1:Hg19::chr3:191074968..191074971,+#_bbed4a315d4fa84c34e047bc2362732ep@chr3:191074968..191074971, +
2.74e-50FFCP PHASE2:Hg19::chr1:168165301..168165329,+#_bbed4a315d4fa84c34e047bc2362732ep@chr1:168165301..168165329, +
2.74e-50FFCP PHASE1:Hg19::chr1:168165301..168165329,+#_bbed4a315d4fa84c34e047bc2362732ep@chr1:168165301..168165329, +
2.74e-50FFCP PHASE2:Hg19::chr3:191074968..191074971,+#_bbed4a315d4fa84c34e047bc2362732ep@chr3:191074968..191074971, +
2.74e-50FFCP PHASE2:Hg19::chr11:65629672..65629698,+#_bbed4a315d4fa84c34e047bc2362732ep@chr11:65629672..65629698, +
2.74e-50FFCP PHASE1:Hg19::chr17:4846101..4846106,+#_bbed4a315d4fa84c34e047bc2362732ep@chr17:4846101..4846106, +
2.74e-50FFCP PHASE1:Hg19::chr3:191074565..191074573,+#_bbed4a315d4fa84c34e047bc2362732ep@chr3:191074565..191074573, +
2.74e-50FFCP PHASE2:Hg19::chr9:88939319..88939326,-#_bbed4a315d4fa84c34e047bc2362732ep25@ZCCHC6
2.74e-50FFCP PHASE2:Hg19::chr3:191074565..191074573,+#_bbed4a315d4fa84c34e047bc2362732ep@chr3:191074565..191074573, +
2.74e-50FFCP PHASE1:Hg19::chr9:88939319..88939326,-#_bbed4a315d4fa84c34e047bc2362732ep25@ZCCHC6
2.74e-50FFCP PHASE2:Hg19::chr1:168165589..168165617,+#_bbed4a315d4fa84c34e047bc2362732ep@chr1:168165589..168165617, +
2.74e-50FFCP PHASE1:Hg19::chr11:65629672..65629698,+#_bbed4a315d4fa84c34e047bc2362732ep@chr11:65629672..65629698, +
2.74e-50FFCP PHASE2:Hg19::chr16:33408523..33408542,+#_bbed4a315d4fa84c34e047bc2362732ep@chr16:33408523..33408542, +
2.74e-50FFCP PHASE1:Hg19::chr1:168165589..168165617,+#_bbed4a315d4fa84c34e047bc2362732ep@chr1:168165589..168165617, +
2.74e-50FFCP PHASE2:Hg19::chr12:80838145..80838152,+#_bbed4a315d4fa84c34e047bc2362732ep9@PTPRQ
2.74e-50FFCP PHASE2:Hg19::chr9:3330877..3330914,-#_bbed4a315d4fa84c34e047bc2362732ep@chr9:3330877..3330914, -
2.74e-50FFCP PHASE2:Hg19::chr2:140624829..140624870,+#_bbed4a315d4fa84c34e047bc2362732ep@chr2:140624829..140624870, +
2.74e-50FFCP PHASE2:Hg19::chr13:96024979..96024980,-#_bbed4a315d4fa84c34e047bc2362732ep@chr13:96024979..96024980, -
2.74e-50FFCP PHASE1:Hg19::chr9:3330877..3330914,-#_bbed4a315d4fa84c34e047bc2362732ep@chr9:3330877..3330914, -
2.74e-50FFCP PHASE1:Hg19::chr2:140624829..140624870,+#_bbed4a315d4fa84c34e047bc2362732ep@chr2:140624829..140624870, +
2.74e-50FFCP PHASE1:Hg19::chr6:53658203..53658215,-#_bbed4a315d4fa84c34e047bc2362732ep@chr6:53658203..53658215, -
2.74e-50FFCP PHASE2:Hg19::chr17:4846101..4846106,+#_bbed4a315d4fa84c34e047bc2362732ep@chr17:4846101..4846106, +
2.74e-50FFCP PHASE1:Hg19::chr14:78718132..78718157,+#_bbed4a315d4fa84c34e047bc2362732ep@chr14:78718132..78718157, +
2.74e-50FFCP PHASE2:Hg19::chr6:53658203..53658215,-#_bbed4a315d4fa84c34e047bc2362732ep@chr6:53658203..53658215, -
2.74e-50FFCP PHASE1:Hg19::chr12:80838145..80838152,+#_bbed4a315d4fa84c34e047bc2362732ep9@PTPRQ
2.74e-50FFCP PHASE2:Hg19::chr9:16510574..16510579,-#_bbed4a315d4fa84c34e047bc2362732ep@chr9:16510574..16510579, -
2.74e-50FFCP PHASE1:Hg19::chr16:33408523..33408542,+#_bbed4a315d4fa84c34e047bc2362732ep@chr16:33408523..33408542, +
2.74e-50FFCP PHASE2:Hg19::chrX:32583961..32583969,-#_bbed4a315d4fa84c34e047bc2362732ep@chrX:32583961..32583969, -
2.74e-50FFCP PHASE2:Hg19::chr14:78718132..78718157,+#_bbed4a315d4fa84c34e047bc2362732ep@chr14:78718132..78718157, +
2.74e-50FFCP PHASE1:Hg19::chr9:16510574..16510579,-#_bbed4a315d4fa84c34e047bc2362732ep@chr9:16510574..16510579, -
2.74e-50FFCP PHASE1:Hg19::chr13:96024979..96024980,-#_bbed4a315d4fa84c34e047bc2362732ep@chr13:96024979..96024980, -
2.74e-50FFCP PHASE2:Hg19::chr6:168251039..168251042,+#_bbed4a315d4fa84c34e047bc2362732ep@chr6:168251039..168251042, +
2.74e-50FFCP PHASE1:Hg19::chrX:32583961..32583969,-#_bbed4a315d4fa84c34e047bc2362732ep@chrX:32583961..32583969, -
4.52e-50FFCP PHASE2:Hg19::chr19:54545613..54545621,-#_3ba633d39967f2ce43e77eab8aaa1aa0p@chr19:54545613..54545621, -
4.52e-50FFCP PHASE1:Hg19::chr7:98735238..98735250,-#_3ba633d39967f2ce43e77eab8aaa1aa0p@chr7:98735238..98735250, -
4.52e-50FFCP PHASE1:Hg19::chr19:54545613..54545621,-#_3ba633d39967f2ce43e77eab8aaa1aa0p@chr19:54545613..54545621, -
4.52e-50FFCP PHASE2:Hg19::chr7:98735238..98735250,-#_3ba633d39967f2ce43e77eab8aaa1aa0p@chr7:98735238..98735250, -
4.52e-50FFCP PHASE1:Hg19::chr15:93200392..93200393,-#_3ba633d39967f2ce43e77eab8aaa1aa0p@chr15:93200392..93200393, -
4.52e-50FFCP PHASE2:Hg19::chr8:64926951..64926953,-#_3ba633d39967f2ce43e77eab8aaa1aa0p@chr8:64926951..64926953, -
4.52e-50FFCP PHASE1:Hg19::chr17:425199..425204,-#_3ba633d39967f2ce43e77eab8aaa1aa0p@chr17:425199..425204, -
4.52e-50FFCP PHASE1:Hg19::chr8:64926951..64926953,-#_3ba633d39967f2ce43e77eab8aaa1aa0p@chr8:64926951..64926953, -
4.52e-50FFCP PHASE1:Hg19::chr18:60662408..60662414,+#_3ba633d39967f2ce43e77eab8aaa1aa0p@chr18:60662408..60662414, +
4.52e-50FFCP PHASE2:Hg19::chr11:117152405..117152414,+#_3ba633d39967f2ce43e77eab8aaa1aa0p17@RNF214
4.52e-50FFCP PHASE2:Hg19::chr19:54545780..54545792,-#_3ba633d39967f2ce43e77eab8aaa1aa0p@chr19:54545780..54545792, -
4.52e-50FFCP PHASE1:Hg19::chr11:117152405..117152414,+#_3ba633d39967f2ce43e77eab8aaa1aa0p17@RNF214

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=CL:0002097&oldid=1837091"