Personal tools

CL:0000150: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
{{CL
{{CL
|id=CL:0000150
|alt_id=
|name=glandular epithelial cell
|namespace=cell
|def="A specialized epithelial cell that is capable of synthesizing and secreting certain biomolecules." [GOC:tfm]
|xref=FMA:86494
|is_a=CL:0000066;;CL:0000151;;CL:0002371
|synonym=
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="A specialized epithelial cell that is capable of synthesizing and secreting certain biomolecules." [GOC:tfm]
|subset=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=CL:0000150
|is_a=CL:0000066 ;;CL:0000151 ;;CL:0002371
|is_obsolete=
|located_in=
|located_in=
|part_of=
|name=glandular epithelial cell
|namespace=FANTOM
|obo_creation_date=
|part_of=UBERON:0006799
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym=
|union_of=
|xref=FMA:86494
}}
}}

Latest revision as of 16:30, 12 September 2014

Name:glandular epithelial cell
Namespace:FANTOM
Definition:"A specialized epithelial cell that is capable of synthesizing and secreting certain biomolecules." [GOC:tfm]
Xrefs:
links:
FMA:86494


Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:CL:0000066(epithelial cell),CL:0000151(secretory cell),CL:0002371(somatic cell)
part_of:UBERON:0006799(glandular epithelium)



Children


is a:CL:0000164 (enteroendocrine cell),CL:0000510 (paneth cell),CL:0000622 (acinar cell),CL:0000637 (chromophil cell of anterior pituitary gland),CL:0002097 (cortical cell of adrenal gland),CL:1000426 (chromaffin cell of adrenal gland),CL:1001596 (salivary gland glandular cell),FF:12837-137B2 (Melanocyte, donor3 (MC+3))

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.

Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000150 (glandular epithelial cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
3.75e-66FFCP PHASE2:Hg19::chr5:66942627..66942643,-#_e0ae031276d378b24e013bf5c18e7acdp1@ENST00000507298
3.75e-66FFCP PHASE2:Hg19::chr6:25004699..25004706,-#_e0ae031276d378b24e013bf5c18e7acdp@chr6:25004699..25004706, -
3.75e-66FFCP PHASE1:Hg19::chr5:66942627..66942643,-#_e0ae031276d378b24e013bf5c18e7acdp1@ENST00000507298
3.75e-66FFCP PHASE1:Hg19::chr6:25004699..25004706,-#_e0ae031276d378b24e013bf5c18e7acdp@chr6:25004699..25004706, -
5.6e-50FFCP PHASE2:Hg19::chr6:25004888..25004899,-#_59baefbdde86d91f0b2ebd1d4c31f2a4p@chr6:25004888..25004899, -
5.6e-50FFCP PHASE1:Hg19::chr6:25004888..25004899,-#_59baefbdde86d91f0b2ebd1d4c31f2a4p@chr6:25004888..25004899, -
5.6e-50FFCP PHASE2:Hg19::chr6:25004760..25004769,-#_59baefbdde86d91f0b2ebd1d4c31f2a4p@chr6:25004760..25004769, -
5.6e-50FFCP PHASE1:Hg19::chr6:25004760..25004769,-#_59baefbdde86d91f0b2ebd1d4c31f2a4p@chr6:25004760..25004769, -
9.25e-50FFCP PHASE2:Hg19::chr12:966094..966103,+#_cd10be9b308326588633c75e89e58e4cp@chr12:966094..966103, +
9.25e-50FFCP PHASE1:Hg19::chr12:966094..966103,+#_cd10be9b308326588633c75e89e58e4cp@chr12:966094..966103, +
9.75e-45FFCP PHASE2:Hg19::chr3:48471830..48471839,-#_ed1404a46222bba22d67131eaa17cac3p27@PLXNB1
9.75e-45FFCP PHASE1:Hg19::chr3:48471830..48471839,-#_ed1404a46222bba22d67131eaa17cac3p27@PLXNB1
2.91e-40FFCP PHASE1:Hg19::chr6:25004791..25004799,-#_e45576e6dcbab61454d5bfe4ae443f48p@chr6:25004791..25004799, -
2.91e-40FFCP PHASE2:Hg19::chr6:25004791..25004799,-#_e45576e6dcbab61454d5bfe4ae443f48p@chr6:25004791..25004799, -
2.42e-39FFCP PHASE1:Hg19::chr15:95334390..95334402,-#_60c5cf2107d1fb09807e4e0403d66fddp@chr15:95334390..95334402, -
2.42e-39FFCP PHASE2:Hg19::chr15:95334390..95334402,-#_60c5cf2107d1fb09807e4e0403d66fddp@chr15:95334390..95334402, -
3.25e-39FFCP PHASE1:Hg19::chr10:47740297..47740299,+#_d659671d803298cbabbf89bfd5a19255p1@FAM25HP
3.25e-39FFCP PHASE2:Hg19::chr10:47740297..47740299,+#_d659671d803298cbabbf89bfd5a19255p1@FAM25HP
1.63e-35FFCP PHASE1:Hg19::chr17:38978586..38978620,-#_9f83a7f44c295cc491cd827a0fbebf01p5@KRT10
1.63e-35FFCP PHASE2:Hg19::chr17:38978586..38978620,-#_9f83a7f44c295cc491cd827a0fbebf01p5@KRT10
8.87e-34FFCP PHASE2:Hg19::chr6:25004678..25004688,-#_12303e87e3e4a9db6b5c5300f9dd8a3ap@chr6:25004678..25004688, -
8.87e-34FFCP PHASE1:Hg19::chr6:25004678..25004688,-#_12303e87e3e4a9db6b5c5300f9dd8a3ap@chr6:25004678..25004688, -
1.24e-33FFCP PHASE1:Hg19::chr12:52912957..52912973,-#_474a6eaf9318d58d8e509708a197d772p17@KRT5
1.24e-33FFCP PHASE2:Hg19::chr12:52912957..52912973,-#_474a6eaf9318d58d8e509708a197d772p17@KRT5
2.23e-32FFCP PHASE1:Hg19::chr17:38978257..38978272,-#_3db46bc3f3b6490864a9a2a2a0c06e7fp6@KRT10
2.23e-32FFCP PHASE2:Hg19::chr17:38978257..38978272,-#_3db46bc3f3b6490864a9a2a2a0c06e7fp6@KRT10
2.62e-32FFCP PHASE1:Hg19::chr17:38976838..38976861,-#_b2372837c1d701d3a74cdbf433beda63p@chr17:38976838..38976861, -
2.62e-32FFCP PHASE2:Hg19::chr17:38976838..38976861,-#_b2372837c1d701d3a74cdbf433beda63p@chr17:38976838..38976861, -
2.66e-30FFCP PHASE2:Hg19::chr7:7604061..7604072,-#_75beaae06b69c001c4200897dba23accp@chr7:7604061..7604072, -
2.66e-30FFCP PHASE1:Hg19::chr7:7604061..7604072,-#_75beaae06b69c001c4200897dba23accp@chr7:7604061..7604072, -
9.9e-30FFCP PHASE1:Hg19::chr10:105830210..105830215,-#_fa87d68fac604461d2b855cf4b2a6a04p@chr10:105830210..105830215, -
9.9e-30FFCP PHASE2:Hg19::chr10:105830210..105830215,-#_fa87d68fac604461d2b855cf4b2a6a04p@chr10:105830210..105830215, -
4.23e-29FFCP PHASE1:Hg19::chr6:56488575..56488587,-#_b9b2f22b12041e079d4c5836bdaa18b4p@chr6:56488575..56488587, -
4.23e-29FFCP PHASE2:Hg19::chr20:3295706..3295717,-#_b9b2f22b12041e079d4c5836bdaa18b4p@chr20:3295706..3295717, -
4.23e-29FFCP PHASE1:Hg19::chr20:3295706..3295717,-#_b9b2f22b12041e079d4c5836bdaa18b4p@chr20:3295706..3295717, -
4.23e-29FFCP PHASE2:Hg19::chr6:56488575..56488587,-#_b9b2f22b12041e079d4c5836bdaa18b4p@chr6:56488575..56488587, -
5.12e-29FFCP PHASE1:Hg19::chr17:38978519..38978529,-#_0339b52722e9e9430cedfb72bc02f81dp9@KRT10
5.12e-29FFCP PHASE2:Hg19::chr17:38978519..38978529,-#_0339b52722e9e9430cedfb72bc02f81dp9@KRT10
6.2e-29FFCP PHASE1:Hg19::chr17:38978422..38978432,-#_303b24a4f170c193788a4df0fa3b19a4p12@KRT10
6.2e-29FFCP PHASE2:Hg19::chr17:38978422..38978432,-#_303b24a4f170c193788a4df0fa3b19a4p12@KRT10
2.92e-25FFCP PHASE2:Hg19::chr2:19428508..19428522,-#_9f1bb82ac1e145dcbb0edb9779838a2ep@chr2:19428508..19428522, -
2.92e-25FFCP PHASE1:Hg19::chr2:19428508..19428522,-#_9f1bb82ac1e145dcbb0edb9779838a2ep@chr2:19428508..19428522, -
3.08e-24FFCP PHASE1:Hg19::chr10:118187381..118187397,+#_8f379ab4d4daf07bd70b2fb6e6992c86p3@PNLIPRP3
3.08e-24FFCP PHASE2:Hg19::chr10:118187381..118187397,+#_8f379ab4d4daf07bd70b2fb6e6992c86p3@PNLIPRP3
5.61e-24FFCP PHASE2:Hg19::chr1:153044083..153044088,-#_3031b28ad638bdb9c3b74142be97d2b8p1@SPRR2B
5.61e-24FFCP PHASE1:Hg19::chr1:153044083..153044088,-#_3031b28ad638bdb9c3b74142be97d2b8p1@SPRR2B
7.1e-24FFCP PHASE2:Hg19::chr10:102981544..102981563,+#_7b2adc8e5ccb41b584f84909fc678ec7p@chr10:102981544..102981563, +
7.1e-24FFCP PHASE1:Hg19::chr10:102981544..102981563,+#_7b2adc8e5ccb41b584f84909fc678ec7p@chr10:102981544..102981563, +
2.62e-23FFCP PHASE1:Hg19::chr5:13428853..13428866,+#_373c4a1a4b419a673c037ffd0e66d207p@chr5:13428853..13428866, +
2.62e-23FFCP PHASE1:Hg19::chr5:107631933..107631940,-#_373c4a1a4b419a673c037ffd0e66d207p@chr5:107631933..107631940, -
2.62e-23FFCP PHASE1:Hg19::chr12:9721581..9721590,+#_373c4a1a4b419a673c037ffd0e66d207p@chr12:9721581..9721590, +
2.62e-23FFCP PHASE2:Hg19::chr9:12698311..12698315,+#_373c4a1a4b419a673c037ffd0e66d207p39@TYRP1
2.62e-23FFCP PHASE2:Hg19::chr7:152166833..152166847,+#_373c4a1a4b419a673c037ffd0e66d207p@chr7:152166833..152166847, +
2.62e-23FFCP PHASE2:Hg19::chr18:56815879..56815901,+#_373c4a1a4b419a673c037ffd0e66d207p@chr18:56815879..56815901, +
2.62e-23FFCP PHASE1:Hg19::chr1:197099062..197099073,-#_373c4a1a4b419a673c037ffd0e66d207p@chr1:197099062..197099073, -
2.62e-23FFCP PHASE1:Hg19::chr18:39541931..39541944,+#_373c4a1a4b419a673c037ffd0e66d207p@chr18:39541931..39541944, +
2.62e-23FFCP PHASE2:Hg19::chr17:38978288..38978293,-#_373c4a1a4b419a673c037ffd0e66d207p21@KRT10
2.62e-23FFCP PHASE1:Hg19::chr12:70464665..70464668,+#_373c4a1a4b419a673c037ffd0e66d207p@chr12:70464665..70464668, +
2.62e-23FFCP PHASE2:Hg19::chr5:107631942..107631951,-#_373c4a1a4b419a673c037ffd0e66d207p@chr5:107631942..107631951, -
2.62e-23FFCP PHASE2:Hg19::chr3:165535017..165535020,-#_373c4a1a4b419a673c037ffd0e66d207p@chr3:165535017..165535020, -
2.62e-23FFCP PHASE1:Hg19::chr9:12698311..12698315,+#_373c4a1a4b419a673c037ffd0e66d207p39@TYRP1
2.62e-23FFCP PHASE1:Hg19::chr7:152166833..152166847,+#_373c4a1a4b419a673c037ffd0e66d207p@chr7:152166833..152166847, +
2.62e-23FFCP PHASE2:Hg19::chr1:197099076..197099083,-#_373c4a1a4b419a673c037ffd0e66d207p@chr1:197099076..197099083, -
2.62e-23FFCP PHASE2:Hg19::chr18:39541931..39541944,+#_373c4a1a4b419a673c037ffd0e66d207p@chr18:39541931..39541944, +
2.62e-23FFCP PHASE2:Hg19::chr8:12651797..12651804,+#_373c4a1a4b419a673c037ffd0e66d207p29@KIAA1456
2.62e-23FFCP PHASE2:Hg19::chr6:50692244..50692251,+#_373c4a1a4b419a673c037ffd0e66d207p@chr6:50692244..50692251, +
2.62e-23FFCP PHASE2:Hg19::chr13:113698895..113698898,+#_373c4a1a4b419a673c037ffd0e66d207p45@MCF2L
2.62e-23FFCP PHASE2:Hg19::chr7:80365907..80365910,-#_373c4a1a4b419a673c037ffd0e66d207p@chr7:80365907..80365910, -
2.62e-23FFCP PHASE1:Hg19::chr5:107631942..107631951,-#_373c4a1a4b419a673c037ffd0e66d207p@chr5:107631942..107631951, -
2.62e-23FFCP PHASE1:Hg19::chr3:165535017..165535020,-#_373c4a1a4b419a673c037ffd0e66d207p@chr3:165535017..165535020, -
2.62e-23FFCP PHASE2:Hg19::chr4:106656882..106656914,+#_373c4a1a4b419a673c037ffd0e66d207p@chr4:106656882..106656914, +
2.62e-23FFCP PHASE1:Hg19::chr13:102611454..102611460,-#_373c4a1a4b419a673c037ffd0e66d207p@chr13:102611454..102611460, -
2.62e-23FFCP PHASE1:Hg19::chr1:197099076..197099083,-#_373c4a1a4b419a673c037ffd0e66d207p@chr1:197099076..197099083, -
2.62e-23FFCP PHASE1:Hg19::chr18:47407103..47407112,-#_373c4a1a4b419a673c037ffd0e66d207p@chr18:47407103..47407112, -
2.62e-23FFCP PHASE1:Hg19::chr8:12651797..12651804,+#_373c4a1a4b419a673c037ffd0e66d207p29@KIAA1456
2.62e-23FFCP PHASE1:Hg19::chr6:50692244..50692251,+#_373c4a1a4b419a673c037ffd0e66d207p@chr6:50692244..50692251, +
2.62e-23FFCP PHASE1:Hg19::chr16:33408291..33408306,+#_373c4a1a4b419a673c037ffd0e66d207p@chr16:33408291..33408306, +
2.62e-23FFCP PHASE2:Hg19::chr1:193232079..193232084,+#_373c4a1a4b419a673c037ffd0e66d207p@chr1:193232079..193232084, +
2.62e-23FFCP PHASE2:Hg19::chrY:8692267..8692276,-#_373c4a1a4b419a673c037ffd0e66d207p@chrY:8692267..8692276, -
2.62e-23FFCP PHASE1:Hg19::chr7:80365907..80365910,-#_373c4a1a4b419a673c037ffd0e66d207p@chr7:80365907..80365910, -
2.62e-23FFCP PHASE1:Hg19::chr10:120200137..120200154,+#_373c4a1a4b419a673c037ffd0e66d207p@chr10:120200137..120200154, +
2.62e-23FFCP PHASE2:Hg19::chr12:9721581..9721590,+#_373c4a1a4b419a673c037ffd0e66d207p@chr12:9721581..9721590, +
2.62e-23FFCP PHASE1:Hg19::chr4:106656882..106656914,+#_373c4a1a4b419a673c037ffd0e66d207p@chr4:106656882..106656914, +
2.62e-23FFCP PHASE1:Hg19::chr17:4847813..4847819,+#_373c4a1a4b419a673c037ffd0e66d207p@chr17:4847813..4847819, +
2.62e-23FFCP PHASE2:Hg19::chr3:165535021..165535029,-#_373c4a1a4b419a673c037ffd0e66d207p@chr3:165535021..165535029, -
2.62e-23FFCP PHASE2:Hg19::chr11:86285462..86285463,-#_373c4a1a4b419a673c037ffd0e66d207p@chr11:86285462..86285463, -
2.62e-23FFCP PHASE2:Hg19::chr2:123706107..123706109,-#_373c4a1a4b419a673c037ffd0e66d207p@chr2:123706107..123706109, -
2.62e-23FFCP PHASE1:Hg19::chrY:8692267..8692276,-#_373c4a1a4b419a673c037ffd0e66d207p@chrY:8692267..8692276, -
2.62e-23FFCP PHASE2:Hg19::chr18:47407103..47407112,-#_373c4a1a4b419a673c037ffd0e66d207p@chr18:47407103..47407112, -
2.62e-23FFCP PHASE1:Hg19::chr1:193232079..193232084,+#_373c4a1a4b419a673c037ffd0e66d207p@chr1:193232079..193232084, +
2.62e-23FFCP PHASE2:Hg19::chr7:80365917..80365926,-#_373c4a1a4b419a673c037ffd0e66d207p@chr7:80365917..80365926, -
2.62e-23FFCP PHASE2:Hg19::chr20:20173664..20173680,+#_373c4a1a4b419a673c037ffd0e66d207p@chr20:20173664..20173680, +
2.62e-23FFCP PHASE2:Hg19::chr20:3295742..3295749,-#_373c4a1a4b419a673c037ffd0e66d207p@chr20:3295742..3295749, -
2.62e-23FFCP PHASE1:Hg19::chr3:165535021..165535029,-#_373c4a1a4b419a673c037ffd0e66d207p@chr3:165535021..165535029, -
2.62e-23FFCP PHASE1:Hg19::chr2:123706107..123706109,-#_373c4a1a4b419a673c037ffd0e66d207p@chr2:123706107..123706109, -
2.62e-23FFCP PHASE2:Hg19::chr10:120200137..120200154,+#_373c4a1a4b419a673c037ffd0e66d207p@chr10:120200137..120200154, +
2.62e-23FFCP PHASE2:Hg19::chr17:4847813..4847819,+#_373c4a1a4b419a673c037ffd0e66d207p@chr17:4847813..4847819, +
2.62e-23FFCP PHASE2:Hg19::chr17:38975839..38975846,-#_373c4a1a4b419a673c037ffd0e66d207p14@KRT10
2.62e-23FFCP PHASE1:Hg19::chr17:38977367..38977371,-#_373c4a1a4b419a673c037ffd0e66d207p@chr17:38977367..38977371, -
2.62e-23FFCP PHASE2:Hg19::chr5:80434077..80434082,+#_373c4a1a4b419a673c037ffd0e66d207p@chr5:80434077..80434082, +

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=CL:0000150&oldid=3275210"