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{{CL
{{CL
|id=CL:0000082
|alt_id=
|name=epithelial cell of lung
|namespace=cell
|def=
|xref=BTO:0004299
|is_a=CL:0000066
|synonym=
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def=
|subset=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=CL:0000082
|is_a=CL:0000066
|is_obsolete=
|located_in=
|located_in=
|part_of=
|name=epithelial cell of lung
|namespace=FANTOM
|obo_creation_date=
|part_of=UBERON:0002048;;UBERON:0000115;;UBERON:0002048
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.owl;;IAO:0000412 http://purl.obolibrary.org/obo/cl.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.owl;;IAO:0000412 http://purl.obolibrary.org/obo/cl.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym=
|union_of=
|xref=BTO:0004299
}}
}}

Latest revision as of 16:29, 12 September 2014

Name:epithelial cell of lung
Namespace:FANTOM
Xrefs:
links:
BTO:0004299


Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:CL:0000066(epithelial cell)
part_of:UBERON:0002048(lung),UBERON:0000115(lung epithelium),UBERON:0002048(lung)



Children


is a:CL:0010003 (epithelial cell of alveolus of lung)
derives from:FF:0100762 (lung cancer cell line sample)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.

Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000082 (epithelial cell of lung), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
3.46e-24FFCP PHASE2:Hg19::chr2:233352573..233352580,-#_2eb73a20164db7dedc1cdab9b0ee8bfbp4@ECEL1
3.46e-24FFCP PHASE1:Hg19::chr2:233352573..233352580,-#_2eb73a20164db7dedc1cdab9b0ee8bfbp4@ECEL1
5.37e-22FFCP PHASE2:Hg19::chr6:45399294..45399301,+#_94164513bc202a85df27a68fefb6dd65p@chr6:45399294..45399301, +
5.37e-22FFCP PHASE1:Hg19::chr7:31938679..31938703,-#_94164513bc202a85df27a68fefb6dd65p@chr7:31938679..31938703, -
5.37e-22FFCP PHASE1:Hg19::chr6:45399294..45399301,+#_94164513bc202a85df27a68fefb6dd65p@chr6:45399294..45399301, +
5.37e-22FFCP PHASE2:Hg19::chr6:45405332..45405343,+#_94164513bc202a85df27a68fefb6dd65p@chr6:45405332..45405343, +
5.37e-22FFCP PHASE1:Hg19::chr6:45405332..45405343,+#_94164513bc202a85df27a68fefb6dd65p@chr6:45405332..45405343, +
5.37e-22FFCP PHASE1:Hg19::chr6:125378873..125378876,+#_94164513bc202a85df27a68fefb6dd65p@chr6:125378873..125378876, +
5.37e-22FFCP PHASE2:Hg19::chr7:31938679..31938703,-#_94164513bc202a85df27a68fefb6dd65p@chr7:31938679..31938703, -
5.37e-22FFCP PHASE2:Hg19::chr7:157944243..157944249,-#_94164513bc202a85df27a68fefb6dd65p@chr7:157944243..157944249, -
5.37e-22FFCP PHASE1:Hg19::chr7:157944243..157944249,-#_94164513bc202a85df27a68fefb6dd65p@chr7:157944243..157944249, -
5.37e-22FFCP PHASE2:Hg19::chr6:125378873..125378876,+#_94164513bc202a85df27a68fefb6dd65p@chr6:125378873..125378876, +
5.37e-22FFCP PHASE2:Hg19::chr6:45405393..45405412,+#_94164513bc202a85df27a68fefb6dd65p@chr6:45405393..45405412, +
5.37e-22FFCP PHASE2:Hg19::chr6:45399245..45399258,+#_94164513bc202a85df27a68fefb6dd65p@chr6:45399245..45399258, +
5.37e-22FFCP PHASE1:Hg19::chr6:45405393..45405412,+#_94164513bc202a85df27a68fefb6dd65p@chr6:45405393..45405412, +
5.37e-22FFCP PHASE1:Hg19::chr6:45399245..45399258,+#_94164513bc202a85df27a68fefb6dd65p@chr6:45399245..45399258, +
5.37e-22FFCP PHASE2:Hg19::chr6:45399533..45399540,+#_94164513bc202a85df27a68fefb6dd65p@chr6:45399533..45399540, +
5.37e-22FFCP PHASE1:Hg19::chr6:45399533..45399540,+#_94164513bc202a85df27a68fefb6dd65p@chr6:45399533..45399540, +
5.37e-22FFCP PHASE2:Hg19::chr6:45399263..45399274,+#_94164513bc202a85df27a68fefb6dd65p@chr6:45399263..45399274, +
5.37e-22FFCP PHASE1:Hg19::chr6:45399263..45399274,+#_94164513bc202a85df27a68fefb6dd65p@chr6:45399263..45399274, +
1.58e-19FFCP PHASE1:Hg19::chr6:73785930..73785949,-#_a0a37a357b0c5245cbf514ee37511366p@chr6:73785930..73785949, -
1.58e-19FFCP PHASE2:Hg19::chr6:73785930..73785949,-#_a0a37a357b0c5245cbf514ee37511366p@chr6:73785930..73785949, -
1.68e-19FFCP PHASE1:Hg19::chr10:5057199..5057247,-#_213dc9c22d68b090d6a450bbb210448bp@chr10:5057199..5057247, -
1.68e-19FFCP PHASE2:Hg19::chr10:5057199..5057247,-#_213dc9c22d68b090d6a450bbb210448bp@chr10:5057199..5057247, -
6.08e-19FFCP PHASE1:Hg19::chr1:161085273..161085285,+#_87688c7374cfc8feb264ad94aa924eebp@chr1:161085273..161085285, +
6.08e-19FFCP PHASE2:Hg19::chr1:161085273..161085285,+#_87688c7374cfc8feb264ad94aa924eebp@chr1:161085273..161085285, +
5.04e-17FFCP PHASE1:Hg19::chr14:36990061..36990072,-#_cc8bfb34212af6924d4e0dbf3620be02p11@NKX2-1
5.04e-17FFCP PHASE2:Hg19::chr14:36990061..36990072,-#_cc8bfb34212af6924d4e0dbf3620be02p11@NKX2-1
1.43e-16FFCP PHASE1:Hg19::chr8:63077406..63077421,-#_b75b9ee3f6a27603d84d4556200029bbp@chr8:63077406..63077421, -
1.43e-16FFCP PHASE2:Hg19::chr8:63077406..63077421,-#_b75b9ee3f6a27603d84d4556200029bbp@chr8:63077406..63077421, -
1.75e-16FFCP PHASE1:Hg19::chr14:36989407..36989410,-#_cc24d02359f5c97239b467d67878e3f9p15@NKX2-1
1.75e-16FFCP PHASE2:Hg19::chr14:36989407..36989410,-#_cc24d02359f5c97239b467d67878e3f9p15@NKX2-1
2.52e-16FFCP PHASE2:Hg19::chr2:194367545..194367554,+#_4585e5d7c15ce1d5e483b155d9db3a1fp@chr2:194367545..194367554, +
2.52e-16FFCP PHASE1:Hg19::chr2:194367545..194367554,+#_4585e5d7c15ce1d5e483b155d9db3a1fp@chr2:194367545..194367554, +
1.19e-15FFCP PHASE1:Hg19::chr14:36989412..36989423,-#_095c5047b16fef062d39cdf9feb02290p12@NKX2-1
1.19e-15FFCP PHASE2:Hg19::chr14:36989412..36989423,-#_095c5047b16fef062d39cdf9feb02290p12@NKX2-1
4.02e-15FFCP PHASE2:Hg19::chr20:22565370..22565388,-#_eabdc52ccae3eb47f82fccf3d9974155p2@FOXA2
4.02e-15FFCP PHASE1:Hg19::chr20:22565370..22565388,-#_eabdc52ccae3eb47f82fccf3d9974155p2@FOXA2
4.91e-15FFCP PHASE2:Hg19::chr6:45399724..45399733,+#_2cdefe9a614e08d81b019c3027df1542p@chr6:45399724..45399733, +
4.91e-15FFCP PHASE1:Hg19::chr6:45399724..45399733,+#_2cdefe9a614e08d81b019c3027df1542p@chr6:45399724..45399733, +
4.91e-15FFCP PHASE1:Hg19::chr5:92526866..92526914,-#_2cdefe9a614e08d81b019c3027df1542p@chr5:92526866..92526914, -
4.91e-15FFCP PHASE2:Hg19::chr8:40525350..40525354,-#_2cdefe9a614e08d81b019c3027df1542p@chr8:40525350..40525354, -
4.91e-15FFCP PHASE2:Hg19::chr7:1968200..1968208,-#_2cdefe9a614e08d81b019c3027df1542p@chr7:1968200..1968208, -
4.91e-15FFCP PHASE2:Hg19::chr11:69518108..69518118,-#_2cdefe9a614e08d81b019c3027df1542p@chr11:69518108..69518118, -
4.91e-15FFCP PHASE1:Hg19::chr7:1968200..1968208,-#_2cdefe9a614e08d81b019c3027df1542p@chr7:1968200..1968208, -
4.91e-15FFCP PHASE2:Hg19::chr6:73786593..73786601,+#_2cdefe9a614e08d81b019c3027df1542p@chr6:73786593..73786601, +
4.91e-15FFCP PHASE2:Hg19::chr5:92526866..92526914,-#_2cdefe9a614e08d81b019c3027df1542p@chr5:92526866..92526914, -
4.91e-15FFCP PHASE1:Hg19::chr6:73786593..73786601,+#_2cdefe9a614e08d81b019c3027df1542p@chr6:73786593..73786601, +
4.91e-15FFCP PHASE2:Hg19::chr11:69518332..69518343,-#_2cdefe9a614e08d81b019c3027df1542p@chr11:69518332..69518343, -
4.91e-15FFCP PHASE2:Hg19::chr6:45399422..45399430,+#_2cdefe9a614e08d81b019c3027df1542p@chr6:45399422..45399430, +
4.91e-15FFCP PHASE1:Hg19::chr6:45399422..45399430,+#_2cdefe9a614e08d81b019c3027df1542p@chr6:45399422..45399430, +
4.91e-15FFCP PHASE2:Hg19::chr6:73786620..73786627,+#_2cdefe9a614e08d81b019c3027df1542p@chr6:73786620..73786627, +
4.91e-15FFCP PHASE1:Hg19::chr4:3344434..3344441,+#_2cdefe9a614e08d81b019c3027df1542p@chr4:3344434..3344441, +
4.91e-15FFCP PHASE1:Hg19::chr13:70823810..70823813,+#_2cdefe9a614e08d81b019c3027df1542p@chr13:70823810..70823813, +
4.91e-15FFCP PHASE1:Hg19::chr6:73786620..73786627,+#_2cdefe9a614e08d81b019c3027df1542p@chr6:73786620..73786627, +
4.91e-15FFCP PHASE2:Hg19::chr4:3344434..3344441,+#_2cdefe9a614e08d81b019c3027df1542p@chr4:3344434..3344441, +
4.91e-15FFCP PHASE1:Hg19::chr12:57638896..57638928,-#_2cdefe9a614e08d81b019c3027df1542p@chr12:57638896..57638928, -
4.91e-15FFCP PHASE1:Hg19::chr11:69518108..69518118,-#_2cdefe9a614e08d81b019c3027df1542p@chr11:69518108..69518118, -
4.91e-15FFCP PHASE2:Hg19::chr13:70823810..70823813,+#_2cdefe9a614e08d81b019c3027df1542p@chr13:70823810..70823813, +
4.91e-15FFCP PHASE2:Hg19::chr7:1968190..1968198,-#_2cdefe9a614e08d81b019c3027df1542p@chr7:1968190..1968198, -
4.91e-15FFCP PHASE1:Hg19::chr7:1968190..1968198,-#_2cdefe9a614e08d81b019c3027df1542p@chr7:1968190..1968198, -
4.91e-15FFCP PHASE1:Hg19::chr11:69518332..69518343,-#_2cdefe9a614e08d81b019c3027df1542p@chr11:69518332..69518343, -
4.91e-15FFCP PHASE2:Hg19::chr12:57638896..57638928,-#_2cdefe9a614e08d81b019c3027df1542p@chr12:57638896..57638928, -
4.91e-15FFCP PHASE1:Hg19::chr8:40525350..40525354,-#_2cdefe9a614e08d81b019c3027df1542p@chr8:40525350..40525354, -
5.27e-15FFCP PHASE1:Hg19::chr7:44574294..44574303,-#_84b828af05bdae2568674a02aed68859p@chr7:44574294..44574303, -
5.27e-15FFCP PHASE2:Hg19::chr7:44574294..44574303,-#_84b828af05bdae2568674a02aed68859p@chr7:44574294..44574303, -
5.27e-15FFCP PHASE1:Hg19::chr18:10085554..10085562,+#_84b828af05bdae2568674a02aed68859p@chr18:10085554..10085562, +
5.27e-15FFCP PHASE1:Hg19::chr5:77683792..77683799,+#_84b828af05bdae2568674a02aed68859p@chr5:77683792..77683799, +
5.27e-15FFCP PHASE2:Hg19::chr12:53686428..53686432,+#_84b828af05bdae2568674a02aed68859p@chr12:53686428..53686432, +
5.27e-15FFCP PHASE2:Hg19::chr5:77683792..77683799,+#_84b828af05bdae2568674a02aed68859p@chr5:77683792..77683799, +
5.27e-15FFCP PHASE2:Hg19::chr18:10085554..10085562,+#_84b828af05bdae2568674a02aed68859p@chr18:10085554..10085562, +
5.27e-15FFCP PHASE1:Hg19::chr19:6828544..6828554,+#_84b828af05bdae2568674a02aed68859p@chr19:6828544..6828554, +
5.27e-15FFCP PHASE1:Hg19::chr16:19396252..19396261,+#_84b828af05bdae2568674a02aed68859p@chr16:19396252..19396261, +
5.27e-15FFCP PHASE2:Hg19::chr19:6828544..6828554,+#_84b828af05bdae2568674a02aed68859p@chr19:6828544..6828554, +
5.27e-15FFCP PHASE1:Hg19::chr4:3310694..3310716,-#_84b828af05bdae2568674a02aed68859p@chr4:3310694..3310716, -
5.27e-15FFCP PHASE2:Hg19::chr16:19396252..19396261,+#_84b828af05bdae2568674a02aed68859p@chr16:19396252..19396261, +
5.27e-15FFCP PHASE1:Hg19::chr12:53686428..53686432,+#_84b828af05bdae2568674a02aed68859p@chr12:53686428..53686432, +
5.27e-15FFCP PHASE2:Hg19::chr4:3310694..3310716,-#_84b828af05bdae2568674a02aed68859p@chr4:3310694..3310716, -
5.66e-15FFCP PHASE2:Hg19::chr6:18208425..18208436,+#_abb0bab07843143c7ca62ea56694b73ep@chr6:18208425..18208436, +
5.66e-15FFCP PHASE1:Hg19::chr2:233352641..233352675,+#_abb0bab07843143c7ca62ea56694b73ep@chr2:233352641..233352675, +
5.66e-15FFCP PHASE2:Hg19::chr2:233352641..233352675,+#_abb0bab07843143c7ca62ea56694b73ep@chr2:233352641..233352675, +
5.66e-15FFCP PHASE1:Hg19::chr1:156779602..156779619,-#_abb0bab07843143c7ca62ea56694b73ep@chr1:156779602..156779619, -
5.66e-15FFCP PHASE1:Hg19::chr18:71843121..71843138,+#_abb0bab07843143c7ca62ea56694b73ep@chr18:71843121..71843138, +
5.66e-15FFCP PHASE2:Hg19::chr1:156779602..156779619,-#_abb0bab07843143c7ca62ea56694b73ep@chr1:156779602..156779619, -
5.66e-15FFCP PHASE2:Hg19::chr18:71843121..71843138,+#_abb0bab07843143c7ca62ea56694b73ep@chr18:71843121..71843138, +
5.66e-15FFCP PHASE1:Hg19::chr18:71843159..71843180,+#_abb0bab07843143c7ca62ea56694b73ep@chr18:71843159..71843180, +
5.66e-15FFCP PHASE2:Hg19::chr18:71843159..71843180,+#_abb0bab07843143c7ca62ea56694b73ep@chr18:71843159..71843180, +
5.66e-15FFCP PHASE1:Hg19::chr18:72611750..72611755,+#_abb0bab07843143c7ca62ea56694b73ep@chr18:72611750..72611755, +
5.66e-15FFCP PHASE1:Hg19::chr6:18208425..18208436,+#_abb0bab07843143c7ca62ea56694b73ep@chr6:18208425..18208436, +
5.66e-15FFCP PHASE2:Hg19::chr18:72611750..72611755,+#_abb0bab07843143c7ca62ea56694b73ep@chr18:72611750..72611755, +
5.96e-15FFCP PHASE1:Hg19::chr14:36982724..36982767,-#_b00fe5a8d91ad4704c30351da7e1243fp1@SFTA3
5.96e-15FFCP PHASE2:Hg19::chr14:36982724..36982767,-#_b00fe5a8d91ad4704c30351da7e1243fp1@SFTA3
2.37e-14FFCP PHASE2:Hg19::chr11:123325116..123325128,+#_c51aa76ba0c94295734e9fd282a71421p4@ENST00000525757, p4@uc001pyv.1
2.37e-14FFCP PHASE1:Hg19::chr11:123325116..123325128,+#_c51aa76ba0c94295734e9fd282a71421p4@ENST00000525757, p4@uc001pyv.1
2.81e-14FFCP PHASE1:Hg19::chrY:59027988..59028000,+#_8e1968ef7f9191a3bc4b018279d87cd0p@chrY:59027988..59028000, +
2.81e-14FFCP PHASE2:Hg19::chrY:59027988..59028000,+#_8e1968ef7f9191a3bc4b018279d87cd0p@chrY:59027988..59028000, +
3.31e-14FFCP PHASE1:Hg19::chr14:36982935..36982943,-#_552cf2e3a95f54262ea528eb298d2099p9@SFTA3
3.31e-14FFCP PHASE1:Hg19::chr11:17555398..17555410,-#_552cf2e3a95f54262ea528eb298d2099p9@USH1C
3.31e-14FFCP PHASE2:Hg19::chr14:36982935..36982943,-#_552cf2e3a95f54262ea528eb298d2099p9@SFTA3
3.31e-14FFCP PHASE2:Hg19::chr11:17555398..17555410,-#_552cf2e3a95f54262ea528eb298d2099p9@USH1C

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