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{{UBERON
{{UBERON
|id=UBERON:0011137
|alt_id=
|name=axial skeletal system
|namespace=
|def="Subdivision of the skeletal system which consists of the axial skeleton plus associated joints." [UBERON:cjm]
|xref=FMA:7483
|is_a=UBERON:0000075
|synonym=
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="Subdivision of the skeletal system which consists of the axial skeleton plus associated joints." [UBERON:cjm]
|subset=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=UBERON:0011137
|is_a=UBERON:0000075
|is_obsolete=
|located_in=
|located_in=
|name=axial skeletal system
|namespace=FANTOM
|obo_creation_date=
|part_of=
|part_of=
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym=
|union_of=
|xref=FMA:7483
}}
}}

Latest revision as of 18:10, 12 September 2014

Name:axial skeletal system
Namespace:FANTOM
Definition:"Subdivision of the skeletal system which consists of the axial skeleton plus associated joints." [UBERON:cjm]
Xrefs:
links:
FMA:7483

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0000075(subdivision of skeletal system)



Children

part of:UBERON:0002328 (notochord),UBERON:0010323 (cranial skeletal system)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0011137 (axial skeletal system), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
1.87e-86FFCP PHASE2:Mm9::chr9:42207777..42207789,-#_88219e40f6759d4b740fc1dfc61e6e3ap7@Tecta
1.87e-86FFCP PHASE2:Mm9::chr10:80806020..80806031,-#_88219e40f6759d4b740fc1dfc61e6e3ap3@Gipc3
1.87e-86FFCP PHASE2:Mm9::chr17:31335869..31335899,-#_88219e40f6759d4b740fc1dfc61e6e3ap1@Tmprss3
1.87e-86FFCP PHASE1:Mm9::chr15:85334335..85334353,+#_88219e40f6759d4b740fc1dfc61e6e3ap@chr15:85334335..85334353, +
1.87e-86FFCP PHASE1:Mm9::chr10:107349418..107349423,-#_88219e40f6759d4b740fc1dfc61e6e3ap5@Otogl
1.87e-86FFCP PHASE2:Mm9::chr13:78257518..78257522,+#_88219e40f6759d4b740fc1dfc61e6e3ap@chr13:78257518..78257522, +
1.87e-86FFCP PHASE2:Mm9::chr10:67371994..67372010,+#_88219e40f6759d4b740fc1dfc61e6e3ap@chr10:67371994..67372010, +
1.87e-86FFCP PHASE1:Mm9::chr12:109905399..109905416,+#_88219e40f6759d4b740fc1dfc61e6e3ap@chr12:109905399..109905416, +
1.87e-86FFCP PHASE1:Mm9::chr10:80806047..80806059,-#_88219e40f6759d4b740fc1dfc61e6e3ap4@Gipc3
1.87e-86FFCP PHASE2:Mm9::chr4:63079735..63079745,-#_88219e40f6759d4b740fc1dfc61e6e3ap@chr4:63079735..63079745, -
1.87e-86FFCP PHASE1:Mm9::chr9:42207852..42207876,-#_88219e40f6759d4b740fc1dfc61e6e3ap2@Tecta
1.87e-86FFCP PHASE1:Mm9::chr17:13983198..13983203,+#_88219e40f6759d4b740fc1dfc61e6e3ap@chr17:13983198..13983203, +
1.87e-86FFCP PHASE2:Mm9::chr1:93235228..93235249,+#_88219e40f6759d4b740fc1dfc61e6e3ap@chr1:93235228..93235249, +
1.87e-86FFCP PHASE1:Mm9::chr13:48087761..48087775,-#_88219e40f6759d4b740fc1dfc61e6e3ap@chr13:48087761..48087775, -
1.87e-86FFCP PHASE1:Mm9::chr7:109052262..109052291,-#_88219e40f6759d4b740fc1dfc61e6e3ap1@Tomt
1.87e-86FFCP PHASE1:Mm9::chr2:152453066..152453075,-#_88219e40f6759d4b740fc1dfc61e6e3ap@chr2:152453066..152453075, -
1.87e-86FFCP PHASE1:Mm9::chr5:28035962..28035983,+#_88219e40f6759d4b740fc1dfc61e6e3ap@chr5:28035962..28035983, +
1.87e-86FFCP PHASE1:Mm9::chr4:101908153..101908163,+#_88219e40f6759d4b740fc1dfc61e6e3ap@chr4:101908153..101908163, +
1.87e-86FFCP PHASE2:Mm9::chr19:21028739..21028785,-#_88219e40f6759d4b740fc1dfc61e6e3ap1@Tmc1
1.87e-86FFCP PHASE1:Mm9::chr9:42206730..42206739,-#_88219e40f6759d4b740fc1dfc61e6e3ap@chr9:42206730..42206739, -
1.87e-86FFCP PHASE1:Mm9::chr16:96494788..96494801,+#_88219e40f6759d4b740fc1dfc61e6e3ap12@B3galt5
1.87e-86FFCP PHASE2:Mm9::chr8:13414266..13414279,+#_88219e40f6759d4b740fc1dfc61e6e3ap@chr8:13414266..13414279, +
1.87e-86FFCP PHASE2:Mm9::chr2:53464168..53464175,+#_88219e40f6759d4b740fc1dfc61e6e3ap@chr2:53464168..53464175, +
1.87e-86FFCP PHASE2:Mm9::chr5:30710455..30710464,-#_88219e40f6759d4b740fc1dfc61e6e3ap9@Otof
1.87e-86FFCP PHASE1:Mm9::chr1:94627290..94627299,-#_88219e40f6759d4b740fc1dfc61e6e3ap@chr1:94627290..94627299, -
1.87e-86FFCP PHASE2:Mm9::chr5:68423014..68423037,+#_88219e40f6759d4b740fc1dfc61e6e3ap1@Grxcr1
1.87e-86FFCP PHASE2:Mm9::chr10:108316802..108316807,-#_88219e40f6759d4b740fc1dfc61e6e3ap@chr10:108316802..108316807, -
1.87e-86FFCP PHASE2:Mm9::chr17:13983102..13983126,+#_88219e40f6759d4b740fc1dfc61e6e3ap@chr17:13983102..13983126, +
1.87e-86FFCP PHASE1:Mm9::chr6:86746562..86746579,-#_88219e40f6759d4b740fc1dfc61e6e3ap@chr6:86746562..86746579, -
1.87e-86FFCP PHASE2:Mm9::chr1:78523144..78523177,+#_88219e40f6759d4b740fc1dfc61e6e3ap@chr1:78523144..78523177, +
1.87e-86FFCP PHASE2:Mm9::chr15:89215306..89215315,+#_88219e40f6759d4b740fc1dfc61e6e3ap@chr15:89215306..89215315, +
1.87e-86FFCP PHASE2:Mm9::chr3:58626291..58626298,-#_88219e40f6759d4b740fc1dfc61e6e3ap@chr3:58626291..58626298, -
1.87e-86FFCP PHASE1:Mm9::chrX:154140781..154140788,+#_88219e40f6759d4b740fc1dfc61e6e3ap@chrX:154140781..154140788, +
1.87e-86FFCP PHASE1:Mm9::chr3:69811606..69811616,+#_88219e40f6759d4b740fc1dfc61e6e3ap2@Otol1
1.87e-86FFCP PHASE2:Mm9::chr5:3909290..3909299,+#_88219e40f6759d4b740fc1dfc61e6e3ap@chr5:3909290..3909299, +
1.87e-86FFCP PHASE1:Mm9::chr2:29935952..29935993,+#_88219e40f6759d4b740fc1dfc61e6e3ap7@Pkn3
1.87e-86FFCP PHASE1:Mm9::chr1:78523144..78523177,+#_88219e40f6759d4b740fc1dfc61e6e3ap@chr1:78523144..78523177, +
1.87e-86FFCP PHASE1:Mm9::chr3:106986057..106986062,+#_88219e40f6759d4b740fc1dfc61e6e3ap1@Kcna10
1.87e-86FFCP PHASE1:Mm9::chr11:120222470..120222516,+#_88219e40f6759d4b740fc1dfc61e6e3ap2@Fscn2
1.87e-86FFCP PHASE2:Mm9::chr9:42207965..42207978,-#_88219e40f6759d4b740fc1dfc61e6e3ap5@Tecta
1.87e-86FFCP PHASE1:Mm9::chr1:172843885..172843890,-#_88219e40f6759d4b740fc1dfc61e6e3ap@chr1:172843885..172843890, -
1.87e-86FFCP PHASE1:Mm9::chr12:13508015..13508019,+#_88219e40f6759d4b740fc1dfc61e6e3ap@chr12:13508015..13508019, +
1.87e-86FFCP PHASE2:Mm9::chr1:172843847..172843880,-#_88219e40f6759d4b740fc1dfc61e6e3ap@chr1:172843847..172843880, -
1.87e-86FFCP PHASE2:Mm9::chr9:66860888..66860899,+#_88219e40f6759d4b740fc1dfc61e6e3ap@chr9:66860888..66860899, +
1.87e-86FFCP PHASE1:Mm9::chr9:42208023..42208043,-#_88219e40f6759d4b740fc1dfc61e6e3ap4@Tecta
1.87e-86FFCP PHASE1:Mm9::chr2:121206695..121206711,-#_88219e40f6759d4b740fc1dfc61e6e3ap1@Strc
1.87e-86FFCP PHASE2:Mm9::chr4:115556989..115556997,+#_88219e40f6759d4b740fc1dfc61e6e3ap1@Kncn
1.87e-86FFCP PHASE1:Mm9::chr3:154693281..154693317,-#_88219e40f6759d4b740fc1dfc61e6e3ap@chr3:154693281..154693317, -
1.87e-86FFCP PHASE2:Mm9::chr13:76964459..76964469,+#_88219e40f6759d4b740fc1dfc61e6e3ap15@Mctp1
1.87e-86FFCP PHASE2:Mm9::chr11:120222470..120222516,+#_88219e40f6759d4b740fc1dfc61e6e3ap2@Fscn2
1.87e-86FFCP PHASE2:Mm9::chr19:55255206..55255223,+#_88219e40f6759d4b740fc1dfc61e6e3ap1@Tectb
1.87e-86FFCP PHASE1:Mm9::chr7:109265277..109265288,-#_88219e40f6759d4b740fc1dfc61e6e3ap4@Chrna10
1.87e-86FFCP PHASE2:Mm9::chr11:102123554..102123566,+#_88219e40f6759d4b740fc1dfc61e6e3ap4@BC030867
1.87e-86FFCP PHASE1:Mm9::chr5:3909290..3909299,+#_88219e40f6759d4b740fc1dfc61e6e3ap@chr5:3909290..3909299, +
1.87e-86FFCP PHASE1:Mm9::chr10:67371994..67372010,+#_88219e40f6759d4b740fc1dfc61e6e3ap@chr10:67371994..67372010, +
1.87e-86FFCP PHASE1:Mm9::chr9:42207697..42207705,-#_88219e40f6759d4b740fc1dfc61e6e3ap@chr9:42207697..42207705, -
1.87e-86FFCP PHASE1:Mm9::chr4:130461150..130461185,+#_88219e40f6759d4b740fc1dfc61e6e3ap@chr4:130461150..130461185, +
1.87e-86FFCP PHASE1:Mm9::chr17:13983095..13983100,+#_88219e40f6759d4b740fc1dfc61e6e3ap@chr17:13983095..13983100, +
1.87e-86FFCP PHASE1:Mm9::chr13:43699228..43699239,+#_88219e40f6759d4b740fc1dfc61e6e3ap@chr13:43699228..43699239, +
1.87e-86FFCP PHASE2:Mm9::chr9:42206784..42206793,-#_88219e40f6759d4b740fc1dfc61e6e3ap@chr9:42206784..42206793, -
1.87e-86FFCP PHASE2:Mm9::chr3:154459184..154459195,+#_88219e40f6759d4b740fc1dfc61e6e3ap@chr3:154459184..154459195, +
1.87e-86FFCP PHASE2:Mm9::chr2:67011941..67011951,+#_88219e40f6759d4b740fc1dfc61e6e3ap3@Gm1322
1.87e-86FFCP PHASE2:Mm9::chr14:47293487..47293493,-#_88219e40f6759d4b740fc1dfc61e6e3ap@chr14:47293487..47293493, -
1.87e-86FFCP PHASE2:Mm9::chr1:16651649..16651655,+#_88219e40f6759d4b740fc1dfc61e6e3ap@chr1:16651649..16651655, +
1.87e-86FFCP PHASE1:Mm9::chr5:150945209..150945220,+#_88219e40f6759d4b740fc1dfc61e6e3ap@chr5:150945209..150945220, +
1.87e-86FFCP PHASE2:Mm9::chr2:73232344..73232356,-#_88219e40f6759d4b740fc1dfc61e6e3ap@chr2:73232344..73232356, -
1.87e-86FFCP PHASE1:Mm9::chr9:41495920..41495928,-#_88219e40f6759d4b740fc1dfc61e6e3ap@chr9:41495920..41495928, -
1.87e-86FFCP PHASE1:Mm9::chr2:53464178..53464186,+#_88219e40f6759d4b740fc1dfc61e6e3ap@chr2:53464178..53464186, +
1.87e-86FFCP PHASE2:Mm9::chr2:128881546..128881553,-#_88219e40f6759d4b740fc1dfc61e6e3ap@chr2:128881546..128881553, -
1.87e-86FFCP PHASE1:Mm9::chr7:29733825..29733837,-#_88219e40f6759d4b740fc1dfc61e6e3ap@chr7:29733825..29733837, -
1.87e-86FFCP PHASE1:Mm9::chr1:93235228..93235249,+#_88219e40f6759d4b740fc1dfc61e6e3ap@chr1:93235228..93235249, +
1.87e-86FFCP PHASE2:Mm9::chr10:107349418..107349423,-#_88219e40f6759d4b740fc1dfc61e6e3ap5@Otogl
1.87e-86FFCP PHASE1:Mm9::chr9:56208792..56208814,-#_88219e40f6759d4b740fc1dfc61e6e3ap@chr9:56208792..56208814, -
1.87e-86FFCP PHASE1:Mm9::chr15:58480061..58480066,+#_88219e40f6759d4b740fc1dfc61e6e3ap5@Fer1l6
1.87e-86FFCP PHASE2:Mm9::chr5:150945209..150945220,+#_88219e40f6759d4b740fc1dfc61e6e3ap@chr5:150945209..150945220, +
1.87e-86FFCP PHASE1:Mm9::chr19:55256373..55256384,+#_88219e40f6759d4b740fc1dfc61e6e3ap@chr19:55256373..55256384, +
1.87e-86FFCP PHASE1:Mm9::chr13:78322370..78322376,-#_88219e40f6759d4b740fc1dfc61e6e3ap4@uc007rhb.1
1.87e-86FFCP PHASE2:Mm9::chr1:60561636..60561645,-#_88219e40f6759d4b740fc1dfc61e6e3ap@chr1:60561636..60561645, -
1.87e-86FFCP PHASE1:Mm9::chr1:182528371..182528385,+#_88219e40f6759d4b740fc1dfc61e6e3ap@chr1:182528371..182528385, +
1.87e-86FFCP PHASE1:Mm9::chr14:31283085..31283097,-#_88219e40f6759d4b740fc1dfc61e6e3ap@chr14:31283085..31283097, -
1.87e-86FFCP PHASE1:Mm9::chr6:113251614..113251623,+#_88219e40f6759d4b740fc1dfc61e6e3ap@chr6:113251614..113251623, +
1.87e-86FFCP PHASE1:Mm9::chr1:63733478..63733491,-#_88219e40f6759d4b740fc1dfc61e6e3ap1@Dytn
1.87e-86FFCP PHASE1:Mm9::chr19:10536767..10536777,-#_88219e40f6759d4b740fc1dfc61e6e3ap@chr19:10536767..10536777, -
1.87e-86FFCP PHASE2:Mm9::chr2:9811162..9811171,-#_88219e40f6759d4b740fc1dfc61e6e3ap2@9230102O04Rik
1.87e-86FFCP PHASE1:Mm9::chr15:103146966..103146971,-#_88219e40f6759d4b740fc1dfc61e6e3ap@chr15:103146966..103146971, -
1.87e-86FFCP PHASE2:Mm9::chr9:42207792..42207805,-#_88219e40f6759d4b740fc1dfc61e6e3ap11@Tecta
1.87e-86FFCP PHASE2:Mm9::chr10:80806047..80806059,-#_88219e40f6759d4b740fc1dfc61e6e3ap4@Gipc3
1.87e-86FFCP PHASE2:Mm9::chr17:31335903..31335921,-#_88219e40f6759d4b740fc1dfc61e6e3ap2@Tmprss3
1.87e-86FFCP PHASE1:Mm9::chr3:35012397..35012405,+#_88219e40f6759d4b740fc1dfc61e6e3ap@chr3:35012397..35012405, +
1.87e-86FFCP PHASE1:Mm9::chr15:89215306..89215315,+#_88219e40f6759d4b740fc1dfc61e6e3ap@chr15:89215306..89215315, +
1.87e-86FFCP PHASE1:Mm9::chr10:107349430..107349440,-#_88219e40f6759d4b740fc1dfc61e6e3ap3@Otogl
1.87e-86FFCP PHASE2:Mm9::chr13:78322370..78322376,-#_88219e40f6759d4b740fc1dfc61e6e3ap4@uc007rhb.1
1.87e-86FFCP PHASE2:Mm9::chr1:182528371..182528385,+#_88219e40f6759d4b740fc1dfc61e6e3ap@chr1:182528371..182528385, +
1.87e-86FFCP PHASE1:Mm9::chr12:109905468..109905474,+#_88219e40f6759d4b740fc1dfc61e6e3ap@chr12:109905468..109905474, +
1.87e-86FFCP PHASE1:Mm9::chr9:42207887..42207960,-#_88219e40f6759d4b740fc1dfc61e6e3ap1@Tecta
1.87e-86FFCP PHASE2:Mm9::chr1:93235253..93235264,+#_88219e40f6759d4b740fc1dfc61e6e3ap@chr1:93235253..93235264, +
1.87e-86FFCP PHASE2:Mm9::chr11:4689837..4689845,-#_88219e40f6759d4b740fc1dfc61e6e3ap@chr11:4689837..4689845, -
1.87e-86FFCP PHASE2:Mm9::chr5:147854240..147854249,-#_88219e40f6759d4b740fc1dfc61e6e3ap@chr5:147854240..147854249, -
1.87e-86FFCP PHASE1:Mm9::chr13:58283583..58283607,-#_88219e40f6759d4b740fc1dfc61e6e3ap@chr13:58283583..58283607, -
1.87e-86FFCP PHASE1:Mm9::chr9:66860888..66860899,+#_88219e40f6759d4b740fc1dfc61e6e3ap@chr9:66860888..66860899, +

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