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{{UBERON
{{UBERON
|id=UBERON:0008949
|alt_id=
|name=lower lobe of lung
|namespace=
|def=
|xref=FMA:7335;;ncithesaurus:Lung_Lower_Lobe;;SCTID:303549000
|is_a=UBERON:0000101
|synonym="inferior lobe of lung" EXACT [UBERON:cjm];;"lobus inferior" EXACT [UBERON:cjm];;"lobus inferior pulmonis" EXACT [UBERON:cjm]
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def=
|subset=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=UBERON:0008949
|is_a=UBERON:0000101
|is_obsolete=
|located_in=
|located_in=
|name=lower lobe of lung
|namespace=FANTOM
|obo_creation_date=
|part_of=
|part_of=
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym="inferior lobe of lung" EXACT [UBERON:cjm];;"lobus inferior" EXACT [UBERON:cjm];;"lobus inferior pulmonis" EXACT [UBERON:cjm]
|union_of=
|xref=FMA:7335;;ncithesaurus:Lung_Lower_Lobe;;SCTID:303549000
}}
}}

Latest revision as of 18:04, 12 September 2014

Name:lower lobe of lung
Namespace:FANTOM
Xrefs:
links:

FMA:7335
ncithesaurus:Lung_Lower_Lobe

SCTID:303549000
Synonyms: "inferior lobe of lung" EXACT [UBERON:cjm]
"lobus inferior" EXACT [UBERON:cjm]
"lobus inferior pulmonis" EXACT [UBERON:cjm]

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0000101(lobe of lung)



Children

is a:UBERON:0002171 (lower lobe of right lung)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

Human (Homo sapiens)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0008949 (lower lobe of lung), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
5.42e-195FFCP PHASE2:Hg19::chr2:85894638..85894644,+#_bef33ec200cd410d7b94069b813ecb61p@chr2:85894638..85894644, +
5.42e-195FFCP PHASE1:Hg19::chr10:81374723..81374726,-#_bef33ec200cd410d7b94069b813ecb61p@chr10:81374723..81374726, -
5.42e-195FFCP PHASE2:Hg19::chr2:96331830..96331836,+#_bef33ec200cd410d7b94069b813ecb61p1@ENST00000425887, p1@uc002suw.1
5.42e-195FFCP PHASE1:Hg19::chrX:93772866..93772868,-#_bef33ec200cd410d7b94069b813ecb61p@chrX:93772866..93772868, -
5.42e-195FFCP PHASE1:Hg19::chr10:81316085..81316090,-#_bef33ec200cd410d7b94069b813ecb61p@chr10:81316085..81316090, -
5.42e-195FFCP PHASE2:Hg19::chr6:32148852..32148862,-#_bef33ec200cd410d7b94069b813ecb61p@chr6:32148852..32148862, -
5.42e-195FFCP PHASE2:Hg19::chr2:85893058..85893063,-#_bef33ec200cd410d7b94069b813ecb61p35@SFTPB
5.42e-195FFCP PHASE2:Hg19::chr2:85884987..85884992,-#_bef33ec200cd410d7b94069b813ecb61p@chr2:85884987..85884992, -
5.42e-195FFCP PHASE1:Hg19::chr8:22021803..22021813,-#_bef33ec200cd410d7b94069b813ecb61p@chr8:22021803..22021813, -
5.42e-195FFCP PHASE2:Hg19::chr2:85894675..85894679,+#_bef33ec200cd410d7b94069b813ecb61p@chr2:85894675..85894679, +
5.42e-195FFCP PHASE2:Hg19::chr2:211117597..211117606,+#_bef33ec200cd410d7b94069b813ecb61p@chr2:211117597..211117606, +
5.42e-195FFCP PHASE1:Hg19::chr2:85894638..85894644,+#_bef33ec200cd410d7b94069b813ecb61p@chr2:85894638..85894644, +
5.42e-195FFCP PHASE1:Hg19::chr2:96331830..96331836,+#_bef33ec200cd410d7b94069b813ecb61p1@ENST00000425887, p1@uc002suw.1
5.42e-195FFCP PHASE2:Hg19::chr10:81316872..81316887,+#_bef33ec200cd410d7b94069b813ecb61p@chr10:81316872..81316887, +
5.42e-195FFCP PHASE1:Hg19::chr6:32148852..32148862,-#_bef33ec200cd410d7b94069b813ecb61p@chr6:32148852..32148862, -
5.42e-195FFCP PHASE1:Hg19::chr2:85893058..85893063,-#_bef33ec200cd410d7b94069b813ecb61p35@SFTPB
5.42e-195FFCP PHASE1:Hg19::chr2:85884987..85884992,-#_bef33ec200cd410d7b94069b813ecb61p@chr2:85884987..85884992, -
5.42e-195FFCP PHASE2:Hg19::chr10:81374723..81374726,-#_bef33ec200cd410d7b94069b813ecb61p@chr10:81374723..81374726, -
5.42e-195FFCP PHASE2:Hg19::chrX:93772866..93772868,-#_bef33ec200cd410d7b94069b813ecb61p@chrX:93772866..93772868, -
5.42e-195FFCP PHASE2:Hg19::chr8:22021803..22021813,-#_bef33ec200cd410d7b94069b813ecb61p@chr8:22021803..22021813, -
5.42e-195FFCP PHASE2:Hg19::chr10:81316085..81316090,-#_bef33ec200cd410d7b94069b813ecb61p@chr10:81316085..81316090, -
5.42e-195FFCP PHASE1:Hg19::chr10:81316872..81316887,+#_bef33ec200cd410d7b94069b813ecb61p@chr10:81316872..81316887, +
5.42e-195FFCP PHASE1:Hg19::chr2:211117597..211117606,+#_bef33ec200cd410d7b94069b813ecb61p@chr2:211117597..211117606, +
5.42e-195FFCP PHASE1:Hg19::chr2:85894675..85894679,+#_bef33ec200cd410d7b94069b813ecb61p@chr2:85894675..85894679, +
9.37e-99FFCP PHASE2:Hg19::chr10:81374587..81374595,+#_b4364cd1602019de0f43a767d8c3369ap@chr10:81374587..81374595, +
9.37e-99FFCP PHASE2:Hg19::chr8:22021903..22021951,-#_b4364cd1602019de0f43a767d8c3369ap@chr8:22021903..22021951, -
9.37e-99FFCP PHASE2:Hg19::chr10:81316132..81316137,-#_b4364cd1602019de0f43a767d8c3369ap@chr10:81316132..81316137, -
9.37e-99FFCP PHASE1:Hg19::chr10:81374313..81374327,+#_b4364cd1602019de0f43a767d8c3369ap@chr10:81374313..81374327, +
9.37e-99FFCP PHASE1:Hg19::chr8:22020196..22020202,+#_b4364cd1602019de0f43a767d8c3369ap13@SFTPC
9.37e-99FFCP PHASE1:Hg19::chr6:32149013..32149018,-#_b4364cd1602019de0f43a767d8c3369ap@chr6:32149013..32149018, -
9.37e-99FFCP PHASE2:Hg19::chr10:81316753..81316759,-#_b4364cd1602019de0f43a767d8c3369ap@chr10:81316753..81316759, -
9.37e-99FFCP PHASE2:Hg19::chr3:127109563..127109564,-#_b4364cd1602019de0f43a767d8c3369ap2@ENST00000488425, p2@uc003ejj.2
9.37e-99FFCP PHASE1:Hg19::chr10:81316910..81316917,-#_b4364cd1602019de0f43a767d8c3369ap@chr10:81316910..81316917, -
9.37e-99FFCP PHASE1:Hg19::chr10:81316311..81316313,-#_b4364cd1602019de0f43a767d8c3369ap@chr10:81316311..81316313, -
9.37e-99FFCP PHASE2:Hg19::chr10:81374752..81374761,+#_b4364cd1602019de0f43a767d8c3369ap@chr10:81374752..81374761, +
9.37e-99FFCP PHASE2:Hg19::chr6:117746871..117746882,-#_b4364cd1602019de0f43a767d8c3369ap10@ROS1
9.37e-99FFCP PHASE2:Hg19::chr2:85885348..85885355,-#_b4364cd1602019de0f43a767d8c3369ap@chr2:85885348..85885355, -
9.37e-99FFCP PHASE1:Hg19::chr2:85894689..85894696,+#_b4364cd1602019de0f43a767d8c3369ap@chr2:85894689..85894696, +
9.37e-99FFCP PHASE2:Hg19::chr2:85889234..85889238,-#_b4364cd1602019de0f43a767d8c3369ap@chr2:85889234..85889238, -
9.37e-99FFCP PHASE1:Hg19::chr8:22021454..22021463,+#_b4364cd1602019de0f43a767d8c3369ap@chr8:22021454..22021463, +
9.37e-99FFCP PHASE2:Hg19::chr10:23631651..23631656,+#_b4364cd1602019de0f43a767d8c3369ap@chr10:23631651..23631656, +
9.37e-99FFCP PHASE2:Hg19::chr10:81316558..81316565,-#_b4364cd1602019de0f43a767d8c3369ap@chr10:81316558..81316565, -
9.37e-99FFCP PHASE2:Hg19::chr2:85894661..85894668,+#_b4364cd1602019de0f43a767d8c3369ap@chr2:85894661..85894668, +
9.37e-99FFCP PHASE1:Hg19::chr8:22020085..22020093,+#_b4364cd1602019de0f43a767d8c3369ap12@SFTPC
9.37e-99FFCP PHASE1:Hg19::chr10:81315944..81315951,-#_b4364cd1602019de0f43a767d8c3369ap@chr10:81315944..81315951, -
9.37e-99FFCP PHASE1:Hg19::chr10:81374331..81374339,+#_b4364cd1602019de0f43a767d8c3369ap@chr10:81374331..81374339, +
9.37e-99FFCP PHASE2:Hg19::chr6:32150708..32150711,-#_b4364cd1602019de0f43a767d8c3369ap7@AGER
9.37e-99FFCP PHASE2:Hg19::chr10:81316764..81316776,-#_b4364cd1602019de0f43a767d8c3369ap@chr10:81316764..81316776, -
9.37e-99FFCP PHASE2:Hg19::chr2:85886515..85886520,-#_b4364cd1602019de0f43a767d8c3369ap@chr2:85886515..85886520, -
9.37e-99FFCP PHASE1:Hg19::chr10:81316132..81316137,-#_b4364cd1602019de0f43a767d8c3369ap@chr10:81316132..81316137, -
9.37e-99FFCP PHASE2:Hg19::chr10:81374462..81374469,+#_b4364cd1602019de0f43a767d8c3369ap@chr10:81374462..81374469, +
9.37e-99FFCP PHASE2:Hg19::chr8:22021526..22021532,+#_b4364cd1602019de0f43a767d8c3369ap@chr8:22021526..22021532, +
9.37e-99FFCP PHASE1:Hg19::chr10:81374587..81374595,+#_b4364cd1602019de0f43a767d8c3369ap@chr10:81374587..81374595, +
9.37e-99FFCP PHASE2:Hg19::chr10:81316023..81316032,-#_b4364cd1602019de0f43a767d8c3369ap@chr10:81316023..81316032, -
9.37e-99FFCP PHASE1:Hg19::chr8:22021482..22021493,+#_b4364cd1602019de0f43a767d8c3369ap@chr8:22021482..22021493, +
9.37e-99FFCP PHASE2:Hg19::chr6:32148869..32148878,-#_b4364cd1602019de0f43a767d8c3369ap@chr6:32148869..32148878, -
9.37e-99FFCP PHASE1:Hg19::chr10:81316753..81316759,-#_b4364cd1602019de0f43a767d8c3369ap@chr10:81316753..81316759, -
9.37e-99FFCP PHASE1:Hg19::chr2:85892915..85892916,-#_b4364cd1602019de0f43a767d8c3369ap40@SFTPB
9.37e-99FFCP PHASE1:Hg19::chr10:81374752..81374761,+#_b4364cd1602019de0f43a767d8c3369ap@chr10:81374752..81374761, +
9.37e-99FFCP PHASE1:Hg19::chr8:22021903..22021951,-#_b4364cd1602019de0f43a767d8c3369ap@chr8:22021903..22021951, -
9.37e-99FFCP PHASE2:Hg19::chr8:22020994..22020998,+#_b4364cd1602019de0f43a767d8c3369ap@chr8:22020994..22020998, +
9.37e-99FFCP PHASE1:Hg19::chr3:127109563..127109564,-#_b4364cd1602019de0f43a767d8c3369ap2@ENST00000488425, p2@uc003ejj.2
9.37e-99FFCP PHASE1:Hg19::chr10:23631651..23631656,+#_b4364cd1602019de0f43a767d8c3369ap@chr10:23631651..23631656, +
9.37e-99FFCP PHASE1:Hg19::chr2:85885348..85885355,-#_b4364cd1602019de0f43a767d8c3369ap@chr2:85885348..85885355, -
9.37e-99FFCP PHASE2:Hg19::chr2:85892885..85892890,-#_b4364cd1602019de0f43a767d8c3369ap23@SFTPB
9.37e-99FFCP PHASE1:Hg19::chr10:81316558..81316565,-#_b4364cd1602019de0f43a767d8c3369ap@chr10:81316558..81316565, -
9.37e-99FFCP PHASE2:Hg19::chr10:81374819..81374828,+#_b4364cd1602019de0f43a767d8c3369ap@chr10:81374819..81374828, +
9.37e-99FFCP PHASE1:Hg19::chr6:117746871..117746882,-#_b4364cd1602019de0f43a767d8c3369ap10@ROS1
9.37e-99FFCP PHASE1:Hg19::chr2:85889234..85889238,-#_b4364cd1602019de0f43a767d8c3369ap@chr2:85889234..85889238, -
9.37e-99FFCP PHASE2:Hg19::chr10:81316041..81316047,-#_b4364cd1602019de0f43a767d8c3369ap@chr10:81316041..81316047, -
9.37e-99FFCP PHASE2:Hg19::chr8:22020196..22020202,+#_b4364cd1602019de0f43a767d8c3369ap13@SFTPC
9.37e-99FFCP PHASE2:Hg19::chr6:32149013..32149018,-#_b4364cd1602019de0f43a767d8c3369ap@chr6:32149013..32149018, -
9.37e-99FFCP PHASE1:Hg19::chr10:81316764..81316776,-#_b4364cd1602019de0f43a767d8c3369ap@chr10:81316764..81316776, -
9.37e-99FFCP PHASE2:Hg19::chr2:85894689..85894696,+#_b4364cd1602019de0f43a767d8c3369ap@chr2:85894689..85894696, +
9.37e-99FFCP PHASE1:Hg19::chr2:85894661..85894668,+#_b4364cd1602019de0f43a767d8c3369ap@chr2:85894661..85894668, +
9.37e-99FFCP PHASE1:Hg19::chr10:81316023..81316032,-#_b4364cd1602019de0f43a767d8c3369ap@chr10:81316023..81316032, -
9.37e-99FFCP PHASE2:Hg19::chr10:81374313..81374327,+#_b4364cd1602019de0f43a767d8c3369ap@chr10:81374313..81374327, +
9.37e-99FFCP PHASE2:Hg19::chr8:22021454..22021463,+#_b4364cd1602019de0f43a767d8c3369ap@chr8:22021454..22021463, +
9.37e-99FFCP PHASE1:Hg19::chr10:81374462..81374469,+#_b4364cd1602019de0f43a767d8c3369ap@chr10:81374462..81374469, +
9.37e-99FFCP PHASE1:Hg19::chr6:32150708..32150711,-#_b4364cd1602019de0f43a767d8c3369ap7@AGER
9.37e-99FFCP PHASE2:Hg19::chr10:81316910..81316917,-#_b4364cd1602019de0f43a767d8c3369ap@chr10:81316910..81316917, -
9.37e-99FFCP PHASE1:Hg19::chr2:85886515..85886520,-#_b4364cd1602019de0f43a767d8c3369ap@chr2:85886515..85886520, -
9.37e-99FFCP PHASE2:Hg19::chr10:81316311..81316313,-#_b4364cd1602019de0f43a767d8c3369ap@chr10:81316311..81316313, -
9.37e-99FFCP PHASE1:Hg19::chr8:22021526..22021532,+#_b4364cd1602019de0f43a767d8c3369ap@chr8:22021526..22021532, +
9.37e-99FFCP PHASE1:Hg19::chr6:32148869..32148878,-#_b4364cd1602019de0f43a767d8c3369ap@chr6:32148869..32148878, -
9.37e-99FFCP PHASE1:Hg19::chr10:81374819..81374828,+#_b4364cd1602019de0f43a767d8c3369ap@chr10:81374819..81374828, +
9.37e-99FFCP PHASE1:Hg19::chr10:81316041..81316047,-#_b4364cd1602019de0f43a767d8c3369ap@chr10:81316041..81316047, -
9.37e-99FFCP PHASE2:Hg19::chr10:81374331..81374339,+#_b4364cd1602019de0f43a767d8c3369ap@chr10:81374331..81374339, +
9.37e-99FFCP PHASE2:Hg19::chr8:22021482..22021493,+#_b4364cd1602019de0f43a767d8c3369ap@chr8:22021482..22021493, +
9.37e-99FFCP PHASE2:Hg19::chr10:81315944..81315951,-#_b4364cd1602019de0f43a767d8c3369ap@chr10:81315944..81315951, -
9.37e-99FFCP PHASE1:Hg19::chr8:22020994..22020998,+#_b4364cd1602019de0f43a767d8c3369ap@chr8:22020994..22020998, +
9.37e-99FFCP PHASE2:Hg19::chr8:22020085..22020093,+#_b4364cd1602019de0f43a767d8c3369ap12@SFTPC
9.37e-99FFCP PHASE2:Hg19::chr2:85892915..85892916,-#_b4364cd1602019de0f43a767d8c3369ap40@SFTPB
9.37e-99FFCP PHASE1:Hg19::chr2:85892885..85892890,-#_b4364cd1602019de0f43a767d8c3369ap23@SFTPB
2.55e-98FFCP PHASE1:Hg19::chr9:77257424..77257435,-#_bd96bd1d505d70f043b9cea613b68d24p@chr9:77257424..77257435, -
2.55e-98FFCP PHASE1:Hg19::chr2:85890569..85890576,-#_bd96bd1d505d70f043b9cea613b68d24p24@SFTPB
2.55e-98FFCP PHASE1:Hg19::chr1:155972294..155972308,-#_bd96bd1d505d70f043b9cea613b68d24p5@ENST00000454974
2.55e-98FFCP PHASE1:Hg19::chr16:23489788..23489792,-#_bd96bd1d505d70f043b9cea613b68d24p@chr16:23489788..23489792, -
2.55e-98FFCP PHASE2:Hg19::chr2:85886778..85886789,-#_bd96bd1d505d70f043b9cea613b68d24p@chr2:85886778..85886789, -
2.55e-98FFCP PHASE2:Hg19::chr2:85893708..85893714,-#_bd96bd1d505d70f043b9cea613b68d24p@chr2:85893708..85893714, -

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