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{{UBERON
{{UBERON
|id=UBERON:0007383
|alt_id=
|name=enveloping layer of ectoderm
|namespace=
|def="Outermost monolayer of cells surrounding the embryo that become very flattened in the blastula and give rise to the periderm. Originallu this tissue is one cell layer thick but in most vertebrates it soon becomes a two layered structure. The outer layer gives rise to the periderm." [ISBN:9780878932504, ZFIN:ZDB-PUB-961014-576]
|xref=EFO:0003425;;TAO:0000086;;ZFA:0000086
|is_a=UBERON:0005423
|synonym="enveloping layer" EXACT [ZFIN:ZDB-PUB-961014-576];;"EVL" EXACT [ZFA:0000086]
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="Outermost monolayer of cells surrounding the embryo that become very flattened in the blastula and give rise to the periderm. Originallu this tissue is one cell layer thick but in most vertebrates it soon becomes a two layered structure. The outer layer gives rise to the periderm." [ISBN:9780878932504, ZFIN:ZDB-PUB-961014-576]
|subset=
|derives_from=
|derives_from=
|develops_from=
|develops_from=UBERON:0000076
|disjoint_from=
|has_quality=
|has_quality=
|id=UBERON:0007383
|is_a=UBERON:0000490 ;;UBERON:0005291 ;;UBERON:0010371
|is_obsolete=
|located_in=
|located_in=
|part_of=
|name=enveloping layer of ectoderm
|namespace=FANTOM
|obo_creation_date=
|part_of=UBERON:0000922
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl;;UBPROP:0000001 "Outermost monolayer of cells surrounding the embryo that become very flattened in the blastula and give rise to the periderm. Sometimes used synonymously with periderm. Kimmel et al, 1995.[TAO]" xsd:string;;UBPROP:0000002 "relationship loss: develops_from superficial blastomere (TAO:0001484)[TAO]" xsd:string
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl;;UBPROP:0000001 "Outermost monolayer of cells surrounding the embryo that become very flattened in the blastula and give rise to the periderm. Sometimes used synonymously with periderm. Kimmel et al, 1995.[TAO]" xsd:string;;UBPROP:0000002 "relationship loss: develops_from superficial blastomere (TAO:0001484)[TAO]" xsd:string
|is_obsolete=
|subset=
|preceded_by=
|synonym="enveloping layer" EXACT [ZFIN:ZDB-PUB-961014-576];;"EVL" EXACT [ZFA:0000086]
|union_of=
|xref=EFO:0003425;;TAO:0000086;;ZFA:0000086
}}
}}

Latest revision as of 18:01, 12 September 2014

Name:enveloping layer of ectoderm
Namespace:FANTOM
Definition:"Outermost monolayer of cells surrounding the embryo that become very flattened in the blastula and give rise to the periderm. Originallu this tissue is one cell layer thick but in most vertebrates it soon becomes a two layered structure. The outer layer gives rise to the periderm." [ISBN:9780878932504, ZFIN:ZDB-PUB-961014-576]
Xrefs:
links:

EFO:0003425
TAO:0000086

ZFA:0000086
Synonyms: "enveloping layer" EXACT [ZFIN:ZDB-PUB-961014-576]
"EVL" EXACT [ZFA:0000086]

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0000490(unilaminar epithelium),UBERON:0005291(embryonic tissue),UBERON:0010371(ecto-epithelium)
develops_from:UBERON:0000076(external ectoderm)
part_of:UBERON:0000922(embryo)



Children

develops from:UBERON:0001003 (skin epidermis),UBERON:0007376 (outer epithelium)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology



Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0007383 (enveloping layer of ectoderm), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
1.4e-86FFCP PHASE1:Mm9::chr11:99227413..99227429,-#_3f75e410fc6f89e3386b78e49e2c3cc5p@chr11:99227413..99227429, -
1.4e-86FFCP PHASE1:Mm9::chr15:101593988..101593997,-#_3f75e410fc6f89e3386b78e49e2c3cc5p1@Krt74
1.4e-86FFCP PHASE2:Mm9::chr4:113836042..113836053,+#_3f75e410fc6f89e3386b78e49e2c3cc5p2@Skint11
1.4e-86FFCP PHASE2:Mm9::chr15:101593988..101593997,-#_3f75e410fc6f89e3386b78e49e2c3cc5p1@Krt74
1.4e-86FFCP PHASE2:Mm9::chr4:138313406..138313411,-#_3f75e410fc6f89e3386b78e49e2c3cc5p2@Pla2g2f
1.4e-86FFCP PHASE2:Mm9::chr11:99227413..99227429,-#_3f75e410fc6f89e3386b78e49e2c3cc5p@chr11:99227413..99227429, -
1.4e-86FFCP PHASE2:Mm9::chr4:113836063..113836075,+#_3f75e410fc6f89e3386b78e49e2c3cc5p1@Skint11
1.4e-86FFCP PHASE2:Mm9::chr5:137057540..137057550,-#_3f75e410fc6f89e3386b78e49e2c3cc5p@chr5:137057540..137057550, -
1.4e-86FFCP PHASE1:Mm9::chr4:113836042..113836053,+#_3f75e410fc6f89e3386b78e49e2c3cc5p2@Skint11
1.4e-86FFCP PHASE1:Mm9::chr4:138313406..138313411,-#_3f75e410fc6f89e3386b78e49e2c3cc5p2@Pla2g2f
1.4e-86FFCP PHASE1:Mm9::chr13:113381448..113381495,-#_3f75e410fc6f89e3386b78e49e2c3cc5p@chr13:113381448..113381495, -
1.4e-86FFCP PHASE1:Mm9::chr5:137057540..137057550,-#_3f75e410fc6f89e3386b78e49e2c3cc5p@chr5:137057540..137057550, -
1.4e-86FFCP PHASE1:Mm9::chr4:113836063..113836075,+#_3f75e410fc6f89e3386b78e49e2c3cc5p1@Skint11
1.4e-86FFCP PHASE1:Mm9::chr1:191609138..191609151,+#_3f75e410fc6f89e3386b78e49e2c3cc5p@chr1:191609138..191609151, +
1.4e-86FFCP PHASE1:Mm9::chr11:36246521..36246530,-#_3f75e410fc6f89e3386b78e49e2c3cc5p@chr11:36246521..36246530, -
1.4e-86FFCP PHASE2:Mm9::chr13:113381448..113381495,-#_3f75e410fc6f89e3386b78e49e2c3cc5p@chr13:113381448..113381495, -
1.4e-86FFCP PHASE2:Mm9::chr1:191609138..191609151,+#_3f75e410fc6f89e3386b78e49e2c3cc5p@chr1:191609138..191609151, +
1.4e-86FFCP PHASE2:Mm9::chr11:36246521..36246530,-#_3f75e410fc6f89e3386b78e49e2c3cc5p@chr11:36246521..36246530, -
1.4e-86FFCP PHASE1:Mm9::chr11:94981134..94981147,+#_3f75e410fc6f89e3386b78e49e2c3cc5p2@Dlx3
1.4e-86FFCP PHASE2:Mm9::chr11:94981134..94981147,+#_3f75e410fc6f89e3386b78e49e2c3cc5p2@Dlx3
1.07e-72FFCP PHASE2:Mm9::chr7:97432305..97432311,+#_e97a7c2b948fffed301fa1d87bec85c2p@chr7:97432305..97432311, +
1.07e-72FFCP PHASE1:Mm9::chr5:137057441..137057450,-#_e97a7c2b948fffed301fa1d87bec85c2p@chr5:137057441..137057450, -
1.07e-72FFCP PHASE2:Mm9::chr1:133938531..133938534,-#_e97a7c2b948fffed301fa1d87bec85c2p6@Mfsd4
1.07e-72FFCP PHASE1:Mm9::chr11:99207849..99207853,-#_e97a7c2b948fffed301fa1d87bec85c2p@chr11:99207849..99207853, -
1.07e-72FFCP PHASE1:Mm9::chr5:137057490..137057506,-#_e97a7c2b948fffed301fa1d87bec85c2p@chr5:137057490..137057506, -
1.07e-72FFCP PHASE1:Mm9::chr1:133938531..133938534,-#_e97a7c2b948fffed301fa1d87bec85c2p6@Mfsd4
1.07e-72FFCP PHASE2:Mm9::chr3:90343597..90343613,+#_e97a7c2b948fffed301fa1d87bec85c2p@chr3:90343597..90343613, +
1.07e-72FFCP PHASE2:Mm9::chr15:83953604..83953633,-#_e97a7c2b948fffed301fa1d87bec85c2p1@Pnpla5
1.07e-72FFCP PHASE2:Mm9::chr11:99207849..99207853,-#_e97a7c2b948fffed301fa1d87bec85c2p@chr11:99207849..99207853, -
1.07e-72FFCP PHASE2:Mm9::chr5:137057441..137057450,-#_e97a7c2b948fffed301fa1d87bec85c2p@chr5:137057441..137057450, -
1.07e-72FFCP PHASE1:Mm9::chr1:46949894..46949911,-#_e97a7c2b948fffed301fa1d87bec85c2p@chr1:46949894..46949911, -
1.07e-72FFCP PHASE1:Mm9::chr15:83953604..83953633,-#_e97a7c2b948fffed301fa1d87bec85c2p1@Pnpla5
1.07e-72FFCP PHASE1:Mm9::chr3:90343597..90343613,+#_e97a7c2b948fffed301fa1d87bec85c2p@chr3:90343597..90343613, +
1.07e-72FFCP PHASE1:Mm9::chr7:97432305..97432311,+#_e97a7c2b948fffed301fa1d87bec85c2p@chr7:97432305..97432311, +
1.07e-72FFCP PHASE2:Mm9::chr1:46949894..46949911,-#_e97a7c2b948fffed301fa1d87bec85c2p@chr1:46949894..46949911, -
1.07e-72FFCP PHASE2:Mm9::chr7:127260268..127260277,+#_e97a7c2b948fffed301fa1d87bec85c2p@chr7:127260268..127260277, +
1.07e-72FFCP PHASE2:Mm9::chr5:137057490..137057506,-#_e97a7c2b948fffed301fa1d87bec85c2p@chr5:137057490..137057506, -
1.07e-72FFCP PHASE1:Mm9::chr7:127260268..127260277,+#_e97a7c2b948fffed301fa1d87bec85c2p@chr7:127260268..127260277, +
1.5e-72FFCP PHASE1:Mm9::chr13:112045218..112045226,+#_e82f64b2c0cf463690842ec43da4445fp1@Actbl2
1.5e-72FFCP PHASE2:Mm9::chr3:138004932..138004945,+#_e82f64b2c0cf463690842ec43da4445fp@chr3:138004932..138004945, +
1.5e-72FFCP PHASE1:Mm9::chr3:138004932..138004945,+#_e82f64b2c0cf463690842ec43da4445fp@chr3:138004932..138004945, +
1.5e-72FFCP PHASE1:Mm9::chr6:134595955..134595965,-#_e82f64b2c0cf463690842ec43da4445fp@chr6:134595955..134595965, -
1.5e-72FFCP PHASE1:Mm9::chr6:97778311..97778326,+#_e82f64b2c0cf463690842ec43da4445fp@chr6:97778311..97778326, +
1.5e-72FFCP PHASE2:Mm9::chr13:112045218..112045226,+#_e82f64b2c0cf463690842ec43da4445fp1@Actbl2
1.5e-72FFCP PHASE1:Mm9::chr15:25672069..25672077,+#_e82f64b2c0cf463690842ec43da4445fp25@Myo10
1.5e-72FFCP PHASE2:Mm9::chr6:97778311..97778326,+#_e82f64b2c0cf463690842ec43da4445fp@chr6:97778311..97778326, +
1.5e-72FFCP PHASE2:Mm9::chr6:134595955..134595965,-#_e82f64b2c0cf463690842ec43da4445fp@chr6:134595955..134595965, -
1.5e-72FFCP PHASE1:Mm9::chr10:43724117..43724131,-#_e82f64b2c0cf463690842ec43da4445fp@chr10:43724117..43724131, -
1.5e-72FFCP PHASE1:Mm9::chr10:66991117..66991146,+#_e82f64b2c0cf463690842ec43da4445fp@chr10:66991117..66991146, +
1.5e-72FFCP PHASE2:Mm9::chr1:37973257..37973271,-#_e82f64b2c0cf463690842ec43da4445fp2@Lyg2
1.5e-72FFCP PHASE2:Mm9::chr10:43724117..43724131,-#_e82f64b2c0cf463690842ec43da4445fp@chr10:43724117..43724131, -
1.5e-72FFCP PHASE2:Mm9::chr15:25672069..25672077,+#_e82f64b2c0cf463690842ec43da4445fp25@Myo10
1.5e-72FFCP PHASE1:Mm9::chr1:37973257..37973271,-#_e82f64b2c0cf463690842ec43da4445fp2@Lyg2
1.5e-72FFCP PHASE2:Mm9::chr1:37973330..37973344,-#_e82f64b2c0cf463690842ec43da4445fp1@Lyg2
1.5e-72FFCP PHASE2:Mm9::chr10:66991117..66991146,+#_e82f64b2c0cf463690842ec43da4445fp@chr10:66991117..66991146, +
1.5e-72FFCP PHASE1:Mm9::chr1:37973330..37973344,-#_e82f64b2c0cf463690842ec43da4445fp1@Lyg2
2.1e-72FFCP PHASE1:Mm9::chr7:117436977..117436981,-#_0512f9b0f97b724d5c13a9168db6de3fp@chr7:117436977..117436981, -
2.1e-72FFCP PHASE1:Mm9::chr4:82496625..82496637,-#_0512f9b0f97b724d5c13a9168db6de3fp6@Zdhhc21
2.1e-72FFCP PHASE2:Mm9::chr4:82496625..82496637,-#_0512f9b0f97b724d5c13a9168db6de3fp6@Zdhhc21
2.1e-72FFCP PHASE1:Mm9::chr1:89485356..89485361,+#_0512f9b0f97b724d5c13a9168db6de3fp@chr1:89485356..89485361, +
2.1e-72FFCP PHASE2:Mm9::chr4:111707315..111707319,+#_0512f9b0f97b724d5c13a9168db6de3fp@chr4:111707315..111707319, +
2.1e-72FFCP PHASE1:Mm9::chr4:111707315..111707319,+#_0512f9b0f97b724d5c13a9168db6de3fp@chr4:111707315..111707319, +
2.1e-72FFCP PHASE2:Mm9::chr7:117436977..117436981,-#_0512f9b0f97b724d5c13a9168db6de3fp@chr7:117436977..117436981, -
2.1e-72FFCP PHASE2:Mm9::chr1:89485356..89485361,+#_0512f9b0f97b724d5c13a9168db6de3fp@chr1:89485356..89485361, +
4.13e-72FFCP PHASE2:Mm9::chr4:113672105..113672116,-#_bfaf0798e8ba3e37228dd4db837e6c5fp1@Skint5
4.13e-72FFCP PHASE1:Mm9::chr4:113672105..113672116,-#_bfaf0798e8ba3e37228dd4db837e6c5fp1@Skint5
1.65e-69FFCP PHASE1:Mm9::chr4:144155170..144155177,-#_f953e913b3903588ce9bb1a18726b55ap2@Gm13124
1.65e-69FFCP PHASE1:Mm9::chr11:99957587..99957593,-#_f953e913b3903588ce9bb1a18726b55ap2@Krt35
1.65e-69FFCP PHASE2:Mm9::chr4:82496602..82496610,-#_f953e913b3903588ce9bb1a18726b55ap8@Zdhhc21
1.65e-69FFCP PHASE2:Mm9::chr6:142831327..142831375,+#_f953e913b3903588ce9bb1a18726b55ap@chr6:142831327..142831375, +
1.65e-69FFCP PHASE1:Mm9::chr3:93248889..93248897,+#_f953e913b3903588ce9bb1a18726b55ap@chr3:93248889..93248897, +
1.65e-69FFCP PHASE2:Mm9::chr11:95086849..95086855,-#_f953e913b3903588ce9bb1a18726b55ap3@ENSMUST00000150818
1.65e-69FFCP PHASE1:Mm9::chr3:93248697..93248704,+#_f953e913b3903588ce9bb1a18726b55ap@chr3:93248697..93248704, +
1.65e-69FFCP PHASE1:Mm9::chrX:166374681..166374688,+#_f953e913b3903588ce9bb1a18726b55ap@chrX:166374681..166374688, +
1.65e-69FFCP PHASE2:Mm9::chr9:67169769..67169780,-#_f953e913b3903588ce9bb1a18726b55ap@chr9:67169769..67169780, -
1.65e-69FFCP PHASE1:Mm9::chr4:135527809..135527823,-#_f953e913b3903588ce9bb1a18726b55ap4@Lypla2
1.65e-69FFCP PHASE2:Mm9::chr14:57868950..57868959,+#_f953e913b3903588ce9bb1a18726b55ap@chr14:57868950..57868959, +
1.65e-69FFCP PHASE1:Mm9::chr8:63958211..63958219,+#_f953e913b3903588ce9bb1a18726b55ap@chr8:63958211..63958219, +
1.65e-69FFCP PHASE1:Mm9::chr5:75107109..75107125,-#_f953e913b3903588ce9bb1a18726b55ap@chr5:75107109..75107125, -
1.65e-69FFCP PHASE2:Mm9::chr3:93249391..93249400,+#_f953e913b3903588ce9bb1a18726b55ap@chr3:93249391..93249400, +
1.65e-69FFCP PHASE2:Mm9::chrX:166374681..166374688,+#_f953e913b3903588ce9bb1a18726b55ap@chrX:166374681..166374688, +
1.65e-69FFCP PHASE1:Mm9::chr14:21082655..21082682,-#_f953e913b3903588ce9bb1a18726b55ap@chr14:21082655..21082682, -
1.65e-69FFCP PHASE2:Mm9::chr3:93248697..93248704,+#_f953e913b3903588ce9bb1a18726b55ap@chr3:93248697..93248704, +
1.65e-69FFCP PHASE2:Mm9::chr5:113617681..113617724,-#_f953e913b3903588ce9bb1a18726b55ap@chr5:113617681..113617724, -
1.65e-69FFCP PHASE1:Mm9::chr4:144311356..144311370,-#_f953e913b3903588ce9bb1a18726b55ap2@Gm13178
1.65e-69FFCP PHASE1:Mm9::chr18:20469239..20469258,+#_f953e913b3903588ce9bb1a18726b55ap2@Dsg1a
1.65e-69FFCP PHASE1:Mm9::chr3:93247552..93247564,+#_f953e913b3903588ce9bb1a18726b55ap@chr3:93247552..93247564, +
1.65e-69FFCP PHASE1:Mm9::chr2:129949046..129949050,+#_f953e913b3903588ce9bb1a18726b55ap2@Tgm6
1.65e-69FFCP PHASE2:Mm9::chr6:97778294..97778306,+#_f953e913b3903588ce9bb1a18726b55ap@chr6:97778294..97778306, +
1.65e-69FFCP PHASE2:Mm9::chr5:137057650..137057655,-#_f953e913b3903588ce9bb1a18726b55ap@chr5:137057650..137057655, -
1.65e-69FFCP PHASE1:Mm9::chr16:56831979..56831988,-#_f953e913b3903588ce9bb1a18726b55ap13@Tmem45a
1.65e-69FFCP PHASE2:Mm9::chr16:56831979..56831988,-#_f953e913b3903588ce9bb1a18726b55ap13@Tmem45a
1.65e-69FFCP PHASE2:Mm9::chr18:25099958..25099967,+#_f953e913b3903588ce9bb1a18726b55ap@chr18:25099958..25099967, +
1.65e-69FFCP PHASE1:Mm9::chr3:93250018..93250027,+#_f953e913b3903588ce9bb1a18726b55ap@chr3:93250018..93250027, +
1.65e-69FFCP PHASE2:Mm9::chr1:192537956..192537958,+#_f953e913b3903588ce9bb1a18726b55ap@chr1:192537956..192537958, +
1.65e-69FFCP PHASE2:Mm9::chr3:93247570..93247579,+#_f953e913b3903588ce9bb1a18726b55ap@chr3:93247570..93247579, +
1.65e-69FFCP PHASE1:Mm9::chr19:59989963..59989986,-#_f953e913b3903588ce9bb1a18726b55ap@chr19:59989963..59989986, -
1.65e-69FFCP PHASE1:Mm9::chr19:25196775..25196781,+#_f953e913b3903588ce9bb1a18726b55ap@chr19:25196775..25196781, +
1.65e-69FFCP PHASE1:Mm9::chr11:115168521..115168541,+#_f953e913b3903588ce9bb1a18726b55ap1@Otop2
1.65e-69FFCP PHASE1:Mm9::chr3:93249140..93249149,+#_f953e913b3903588ce9bb1a18726b55ap@chr3:93249140..93249149, +










Property "Property value" (as page type) with input value "UBPROP:0000001 "Outermost monolayer of cells surrounding the embryo that become very flattened in the blastula and give rise to the periderm. Sometimes used synonymously with periderm. Kimmel et al, 1995.[TAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process., Property "Property value" (as page type) with input value "UBPROP:0000002 "relationship loss: develops_from superficial blastomere (TAO:0001484)[TAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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