UBERON:0005754: Difference between revisions
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{{UBERON | {{UBERON | ||
| | |alt_id= | ||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
| | |def="The initial renal anlage that develops from the most rostral part of the nephrogenic cord is termed the pronephros." [http://www.gudmap.org/About/Tutorial/DevMUS.html#DMK_Nephron] | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
|disjoint_from= | |||
|has_quality= | |has_quality= | ||
|id=UBERON:0005754 | |||
|is_a=UBERON:0005423 | |||
|is_obsolete= | |||
|located_in= | |located_in= | ||
|part_of= | |name=rostral part of nephrogenic cord | ||
|namespace=FANTOM | |||
|obo_creation_date= | |||
|part_of=UBERON:0000922;;UBERON:0004875 | |||
|preceded_by= | |||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
| | |subset= | ||
| | |synonym= | ||
|union_of= | |||
|xref= | |||
}} | }} | ||
Latest revision as of 17:54, 12 September 2014
| Name: | rostral part of nephrogenic cord |
|---|---|
| Namespace: | FANTOM |
| Definition: | "The initial renal anlage that develops from the most rostral part of the nephrogenic cord is termed the pronephros." [1] |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0005423(developing anatomical structure) |
|---|---|
| part_of: | UBERON:0000922(embryo),UBERON:0004875(nephrogenic cord) |
Children
| develops from: | UBERON:0002120 (pronephros) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0005754 (rostral part of nephrogenic cord), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 2.83e-65 | FFCP PHASE1:Mm9::chr10:127470655..127470664,+#_8387abd104907a3e793a7090c34f834a | p@chr10:127470655..127470664, + |
| 2.83e-65 | FFCP PHASE2:Mm9::chr18:44264202..44264213,+#_8387abd104907a3e793a7090c34f834a | p4@Spink12 |
| 2.83e-65 | FFCP PHASE1:Mm9::chr14:63585028..63585037,-#_8387abd104907a3e793a7090c34f834a | p@chr14:63585028..63585037, - |
| 2.83e-65 | FFCP PHASE1:Mm9::chr14:63665679..63665688,+#_8387abd104907a3e793a7090c34f834a | p4@Defb42 |
| 2.83e-65 | FFCP PHASE2:Mm9::chr14:63665679..63665688,+#_8387abd104907a3e793a7090c34f834a | p4@Defb42 |
| 2.83e-65 | FFCP PHASE2:Mm9::chr14:63585028..63585037,-#_8387abd104907a3e793a7090c34f834a | p@chr14:63585028..63585037, - |
| 2.83e-65 | FFCP PHASE2:Mm9::chr10:127470655..127470664,+#_8387abd104907a3e793a7090c34f834a | p@chr10:127470655..127470664, + |
| 2.83e-65 | FFCP PHASE1:Mm9::chr18:44264202..44264213,+#_8387abd104907a3e793a7090c34f834a | p4@Spink12 |
| 3.99e-50 | FFCP PHASE2:Mm9::chr2:152388713..152388729,+#_9b0a7b95236761723dd2f1f2bed0bf3d | p@chr2:152388713..152388729, + |
| 3.99e-50 | FFCP PHASE1:Mm9::chr2:152388713..152388729,+#_9b0a7b95236761723dd2f1f2bed0bf3d | p@chr2:152388713..152388729, + |
| 5.6e-50 | FFCP PHASE2:Hg19::chr2:120409486..120409492,+#_dbcd61420db770d09dd5c8dcc9eaacae | p@chr2:120409486..120409492, + |
| 5.6e-50 | FFCP PHASE1:Hg19::chr2:120409486..120409492,+#_dbcd61420db770d09dd5c8dcc9eaacae | p@chr2:120409486..120409492, + |
| 1.6e-49 | FFCP PHASE2:Mm9::chr11:105797641..105797656,-#_4ed5b7ac10c2c9b44311dd68843ebaad | p4@Cyb561 |
| 1.6e-49 | FFCP PHASE2:Mm9::chr14:63585020..63585025,-#_4ed5b7ac10c2c9b44311dd68843ebaad | p@chr14:63585020..63585025, - |
| 1.6e-49 | FFCP PHASE1:Mm9::chr11:105797641..105797656,-#_4ed5b7ac10c2c9b44311dd68843ebaad | p4@Cyb561 |
| 1.6e-49 | FFCP PHASE1:Mm9::chr9:35597686..35597691,-#_4ed5b7ac10c2c9b44311dd68843ebaad | p2@D730048I06Rik, p2@Gm17727 |
| 1.6e-49 | FFCP PHASE1:Mm9::chr14:63585048..63585062,-#_4ed5b7ac10c2c9b44311dd68843ebaad | p@chr14:63585048..63585062, - |
| 1.6e-49 | FFCP PHASE1:Mm9::chr11:76361451..76361499,+#_4ed5b7ac10c2c9b44311dd68843ebaad | p@chr11:76361451..76361499, + |
| 1.6e-49 | FFCP PHASE2:Mm9::chr14:63585048..63585062,-#_4ed5b7ac10c2c9b44311dd68843ebaad | p@chr14:63585048..63585062, - |
| 1.6e-49 | FFCP PHASE2:Mm9::chr11:76361451..76361499,+#_4ed5b7ac10c2c9b44311dd68843ebaad | p@chr11:76361451..76361499, + |
| 1.6e-49 | FFCP PHASE2:Mm9::chr9:35597686..35597691,-#_4ed5b7ac10c2c9b44311dd68843ebaad | p2@D730048I06Rik, p2@Gm17727 |
| 1.6e-49 | FFCP PHASE1:Mm9::chr14:63585020..63585025,-#_4ed5b7ac10c2c9b44311dd68843ebaad | p@chr14:63585020..63585025, - |
| 2.33e-49 | FFCP PHASE1:Mm9::chr9:26611246..26611253,-#_a88798a7309ca7df32594a8ec633ff72 | p@chr9:26611246..26611253, - |
| 2.33e-49 | FFCP PHASE2:Mm9::chr14:63627556..63627564,-#_a88798a7309ca7df32594a8ec633ff72 | p@chr14:63627556..63627564, - |
| 2.33e-49 | FFCP PHASE1:Mm9::chr14:63627556..63627564,-#_a88798a7309ca7df32594a8ec633ff72 | p@chr14:63627556..63627564, - |
| 2.33e-49 | FFCP PHASE1:Mm9::chr9:26732045..26732085,+#_a88798a7309ca7df32594a8ec633ff72 | p@chr9:26732045..26732085, + |
| 2.33e-49 | FFCP PHASE2:Mm9::chr9:26611246..26611253,-#_a88798a7309ca7df32594a8ec633ff72 | p@chr9:26611246..26611253, - |
| 2.33e-49 | FFCP PHASE2:Mm9::chr9:26732045..26732085,+#_a88798a7309ca7df32594a8ec633ff72 | p@chr9:26732045..26732085, + |
| 2.33e-49 | FFCP PHASE1:Mm9::chr14:51734043..51734054,+#_a88798a7309ca7df32594a8ec633ff72 | p2@Eddm3b |
| 2.33e-49 | FFCP PHASE2:Mm9::chr14:51734043..51734054,+#_a88798a7309ca7df32594a8ec633ff72 | p2@Eddm3b |
| 3.4e-49 | FFCP PHASE1:Mm9::chr2:69981027..69981032,+#_af3efb78ec23da5e2381aba3aea98c4c | p@chr2:69981027..69981032, + |
| 3.4e-49 | FFCP PHASE2:Mm9::chr2:69981027..69981032,+#_af3efb78ec23da5e2381aba3aea98c4c | p@chr2:69981027..69981032, + |
| 9.75e-45 | FFCP PHASE1:Hg19::chr14:68644730..68644737,+#_22f0f370ba8aa7beb0f4db11afca61e0 | p@chr14:68644730..68644737, + |
| 9.75e-45 | FFCP PHASE1:Hg19::chr10:102505655..102505689,+#_22f0f370ba8aa7beb0f4db11afca61e0 | p10@PAX2 |
| 9.75e-45 | FFCP PHASE2:Hg19::chr1:172416185..172416189,-#_22f0f370ba8aa7beb0f4db11afca61e0 | p@chr1:172416185..172416189, - |
| 9.75e-45 | FFCP PHASE1:Hg19::chr1:172416185..172416189,-#_22f0f370ba8aa7beb0f4db11afca61e0 | p@chr1:172416185..172416189, - |
| 9.75e-45 | FFCP PHASE2:Hg19::chr10:102505655..102505689,+#_22f0f370ba8aa7beb0f4db11afca61e0 | p10@PAX2 |
| 9.75e-45 | FFCP PHASE2:Hg19::chr14:68644730..68644737,+#_22f0f370ba8aa7beb0f4db11afca61e0 | p@chr14:68644730..68644737, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chrX:20419453..20419476,+#_7c326baff5045da379d5709bce71ac83 | p@chrX:20419453..20419476, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr10:91753336..91753348,-#_7c326baff5045da379d5709bce71ac83 | p@chr10:91753336..91753348, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr7:25563187..25563205,+#_7c326baff5045da379d5709bce71ac83 | p@chr7:25563187..25563205, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr5:88272459..88272484,-#_7c326baff5045da379d5709bce71ac83 | p@chr5:88272459..88272484, - |
| 4.54e-44 | FFCP PHASE1:Mm9::chr1:155722142..155722175,-#_7c326baff5045da379d5709bce71ac83 | p@chr1:155722142..155722175, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr5:124447371..124447383,+#_7c326baff5045da379d5709bce71ac83 | p@chr5:124447371..124447383, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr11:59845376..59845393,-#_7c326baff5045da379d5709bce71ac83 | p@chr11:59845376..59845393, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr13:21385325..21385329,-#_7c326baff5045da379d5709bce71ac83 | p@chr13:21385325..21385329, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr17:73221062..73221084,+#_7c326baff5045da379d5709bce71ac83 | p@chr17:73221062..73221084, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr2:164499572..164499580,-#_7c326baff5045da379d5709bce71ac83 | p2@Wfdc11 |
| 4.54e-44 | FFCP PHASE2:Mm9::chr14:52608712..52608739,+#_7c326baff5045da379d5709bce71ac83 | p11@Arhgef40 |
| 4.54e-44 | FFCP PHASE2:Mm9::chr13:21378296..21378303,+#_7c326baff5045da379d5709bce71ac83 | p@chr13:21378296..21378303, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr1:192816674..192816714,+#_7c326baff5045da379d5709bce71ac83 | p@chr1:192816674..192816714, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr16:43230846..43230884,+#_7c326baff5045da379d5709bce71ac83 | p@chr16:43230846..43230884, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr11:116901540..116901549,-#_7c326baff5045da379d5709bce71ac83 | p4@uc007mmw.1 |
| 4.54e-44 | FFCP PHASE2:Mm9::chr6:49817766..49817772,-#_7c326baff5045da379d5709bce71ac83 | p@chr6:49817766..49817772, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr9:35651807..35651818,-#_7c326baff5045da379d5709bce71ac83 | p3@9230110F15Rik |
| 4.54e-44 | FFCP PHASE1:Mm9::chr8:19141371..19141383,+#_7c326baff5045da379d5709bce71ac83 | p@chr8:19141371..19141383, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr18:44261480..44261486,+#_7c326baff5045da379d5709bce71ac83 | p@chr18:44261480..44261486, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr14:52542661..52542668,-#_7c326baff5045da379d5709bce71ac83 | p3@Rnase13 |
| 4.54e-44 | FFCP PHASE2:Mm9::chr13:21379098..21379104,-#_7c326baff5045da379d5709bce71ac83 | p@chr13:21379098..21379104, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr16:92995710..92995753,+#_7c326baff5045da379d5709bce71ac83 | p@chr16:92995710..92995753, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr13:21383212..21383225,-#_7c326baff5045da379d5709bce71ac83 | p@chr13:21383212..21383225, - |
| 4.54e-44 | FFCP PHASE1:Mm9::chr4:106730107..106730125,-#_7c326baff5045da379d5709bce71ac83 | p@chr4:106730107..106730125, - |
| 4.54e-44 | FFCP PHASE1:Mm9::chr2:160573065..160573077,+#_7c326baff5045da379d5709bce71ac83 | p@chr2:160573065..160573077, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr7:105313229..105313234,-#_7c326baff5045da379d5709bce71ac83 | p17@Capn5 |
| 4.54e-44 | FFCP PHASE2:Mm9::chr9:70779586..70779596,+#_7c326baff5045da379d5709bce71ac83 | p@chr9:70779586..70779596, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chrX:75798097..75798101,-#_7c326baff5045da379d5709bce71ac83 | p@chrX:75798097..75798101, - |
| 4.54e-44 | FFCP PHASE1:Mm9::chr2:172632171..172632178,-#_7c326baff5045da379d5709bce71ac83 | p@chr2:172632171..172632178, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr5:110773580..110773589,+#_7c326baff5045da379d5709bce71ac83 | p@chr5:110773580..110773589, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chrX:130496286..130496293,-#_7c326baff5045da379d5709bce71ac83 | p@chrX:130496286..130496293, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr2:172632171..172632178,-#_7c326baff5045da379d5709bce71ac83 | p@chr2:172632171..172632178, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr1:90155707..90155720,+#_7c326baff5045da379d5709bce71ac83 | p@chr1:90155707..90155720, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr6:83487114..83487124,-#_7c326baff5045da379d5709bce71ac83 | p@chr6:83487114..83487124, - |
| 4.54e-44 | FFCP PHASE1:Mm9::chr2:152302768..152302774,+#_7c326baff5045da379d5709bce71ac83 | p4@Defb20 |
| 4.54e-44 | FFCP PHASE1:Mm9::chr12:104945515..104945524,-#_7c326baff5045da379d5709bce71ac83 | p@chr12:104945515..104945524, - |
| 4.54e-44 | FFCP PHASE1:Mm9::chr11:53937918..53937922,+#_7c326baff5045da379d5709bce71ac83 | p7@P4ha2 |
| 4.54e-44 | FFCP PHASE1:Mm9::chr8:25706074..25706082,-#_7c326baff5045da379d5709bce71ac83 | p3@Ido1 |
| 4.54e-44 | FFCP PHASE2:Mm9::chr4:137325863..137325870,-#_7c326baff5045da379d5709bce71ac83 | p15@Alpl |
| 4.54e-44 | FFCP PHASE1:Mm9::chr2:164434346..164434353,-#_7c326baff5045da379d5709bce71ac83 | p@chr2:164434346..164434353, - |
| 4.54e-44 | FFCP PHASE1:Mm9::chr1:90155707..90155720,+#_7c326baff5045da379d5709bce71ac83 | p@chr1:90155707..90155720, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr9:26611214..26611227,-#_7c326baff5045da379d5709bce71ac83 | p@chr9:26611214..26611227, - |
| 4.54e-44 | FFCP PHASE1:Mm9::chr7:109379335..109379338,+#_7c326baff5045da379d5709bce71ac83 | p21@Pgap2 |
| 4.54e-44 | FFCP PHASE2:Mm9::chr2:164434346..164434353,-#_7c326baff5045da379d5709bce71ac83 | p@chr2:164434346..164434353, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chrX:75798132..75798152,-#_7c326baff5045da379d5709bce71ac83 | p@chrX:75798132..75798152, - |
| 4.54e-44 | FFCP PHASE1:Mm9::chr8:96014490..96014496,+#_7c326baff5045da379d5709bce71ac83 | p@chr8:96014490..96014496, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr12:114385720..114385732,-#_7c326baff5045da379d5709bce71ac83 | p@chr12:114385720..114385732, - |
| 4.54e-44 | FFCP PHASE1:Mm9::chr2:75866210..75866235,+#_7c326baff5045da379d5709bce71ac83 | p@chr2:75866210..75866235, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr1:165219453..165219469,-#_7c326baff5045da379d5709bce71ac83 | p11@Prrx1 |
| 4.54e-44 | FFCP PHASE1:Mm9::chr16:25752228..25752237,+#_7c326baff5045da379d5709bce71ac83 | p@chr16:25752228..25752237, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr16:23308115..23308126,+#_7c326baff5045da379d5709bce71ac83 | p@chr16:23308115..23308126, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr4:134893699..134893708,+#_7c326baff5045da379d5709bce71ac83 | p@chr4:134893699..134893708, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr9:100350777..100350782,+#_7c326baff5045da379d5709bce71ac83 | p@chr9:100350777..100350782, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr13:21378774..21378782,-#_7c326baff5045da379d5709bce71ac83 | p@chr13:21378774..21378782, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr5:120078716..120078763,-#_7c326baff5045da379d5709bce71ac83 | p@chr5:120078716..120078763, - |
| 4.54e-44 | FFCP PHASE1:Mm9::chr9:35651764..35651782,-#_7c326baff5045da379d5709bce71ac83 | p2@9230110F15Rik |
| 4.54e-44 | FFCP PHASE1:Mm9::chr15:72756032..72756041,-#_7c326baff5045da379d5709bce71ac83 | p@chr15:72756032..72756041, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr11:116901540..116901549,-#_7c326baff5045da379d5709bce71ac83 | p4@uc007mmw.1 |
| 4.54e-44 | FFCP PHASE1:Mm9::chr8:22061771..22061777,-#_7c326baff5045da379d5709bce71ac83 | p3@Gm6040, p3@LOC100503992 |
| 4.54e-44 | FFCP PHASE1:Mm9::chr1:87936213..87936218,+#_7c326baff5045da379d5709bce71ac83 | p@chr1:87936213..87936218, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr14:63611201..63611210,+#_7c326baff5045da379d5709bce71ac83 | p@chr14:63611201..63611210, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr16:28323634..28323657,-#_7c326baff5045da379d5709bce71ac83 | p@chr16:28323634..28323657, - |
