UBERON:0004637: Difference between revisions
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|subset= | |subset= | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from=UBERON:0010351 | ||
|has_quality= | |has_quality= | ||
|located_in= | |located_in= | ||
|part_of= | |part_of=UBERON:0001694;;UBERON:0001703;;UBERON:0001846 | ||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl;;UBPROP:0000001 "Skeletal elements surrounding the membranous labyrinth of the inner ear. Sensory capsules anterolateral to and confluent with occipital arch.[AAO]" xsd:string;;UBPROP:0000002 "relationship loss: part_of occipito-petrosal (AAO:0010831)[AAO]" xsd:string;;UBPROP:0000002 "relationship loss: part_of otic and occipital (AAO:0000993)[AAO]" xsd:string | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl;;UBPROP:0000001 "Skeletal elements surrounding the membranous labyrinth of the inner ear. Sensory capsules anterolateral to and confluent with occipital arch.[AAO]" xsd:string;;UBPROP:0000002 "relationship loss: part_of occipito-petrosal (AAO:0010831)[AAO]" xsd:string;;UBPROP:0000002 "relationship loss: part_of otic and occipital (AAO:0000993)[AAO]" xsd:string | ||
|is_obsolete= | |is_obsolete= | ||
|preceded_by= | |preceded_by= | ||
}} | }} | ||
Latest revision as of 13:36, 27 June 2012
| Name: | otic capsule | ||
|---|---|---|---|
| Definition: | "The capsule surrounding the inner ear mechanism; in elasmobranchs, it remains cartilaginous in the adult; in the embryos of higher vertebrates, it is cartilaginous at first but later becomes bony (at approximately 23 weeks in humans)[Biology-Online]. Bilaterally paired cartilage encasing the semicircular canals of the inner ear[ZFA]." http://www.biology-online.org/dictionary/Otic_capsule, ZFA:0001500 | ||
| Xrefs: |
| ||
| Synonyms: |
"auditory capsule" RELATED [VHOG:0000854] "otic capsule" EXACT [ZFA:0001500] "periotic" RELATED [] "periotic capsule" RELATED [VHOG:0000854] | ||
| Comments: | Taxon notes: developmental relationships need to be checked |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0000020(sense organ),UBERON:0004120(mesoderm-derived structure),UBERON:0004121(ectoderm-derived structure),UBERON:0004765(skeletal element),UBERON:0010314(structure with developmental contribution from neural crest) |
|---|---|
| develops_from: | UBERON:0010351(otic capsule cartilage condensation) |
| part_of: | UBERON:0001694(petrous part of temporal bone),UBERON:0001703(neurocranium),UBERON:0001846(internal ear) |
Children
| part of: | UBERON:0010113 (future membranous labyrinth) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0004637 (otic capsule), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 1.87e-86 | FFCP PHASE2:Mm9::chr13:58283583..58283607,-#_ef0848008da7a18a37873e78b0320066 | p@chr13:58283583..58283607, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr9:42207375..42207384,-#_ef0848008da7a18a37873e78b0320066 | p@chr9:42207375..42207384, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr2:67011956..67011967,+#_ef0848008da7a18a37873e78b0320066 | p1@Gm1322 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr1:93235253..93235264,+#_ef0848008da7a18a37873e78b0320066 | p@chr1:93235253..93235264, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr11:4689837..4689845,-#_ef0848008da7a18a37873e78b0320066 | p@chr11:4689837..4689845, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr8:94180607..94180619,-#_ef0848008da7a18a37873e78b0320066 | p@chr8:94180607..94180619, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr17:31335953..31335957,-#_ef0848008da7a18a37873e78b0320066 | p3@Tmprss3 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr3:154459231..154459240,+#_ef0848008da7a18a37873e78b0320066 | p@chr3:154459231..154459240, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr10:107156949..107156956,-#_ef0848008da7a18a37873e78b0320066 | p3@Ptprq |
| 1.87e-86 | FFCP PHASE2:Mm9::chr13:78322370..78322376,-#_ef0848008da7a18a37873e78b0320066 | p4@uc007rhb.1 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr1:182528371..182528385,+#_ef0848008da7a18a37873e78b0320066 | p@chr1:182528371..182528385, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr7:141605556..141605563,-#_ef0848008da7a18a37873e78b0320066 | p@chr7:141605556..141605563, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr1:154246932..154246939,+#_ef0848008da7a18a37873e78b0320066 | p7@Glt25d2 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr14:102297747..102297765,+#_ef0848008da7a18a37873e78b0320066 | p@chr14:102297747..102297765, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr5:144115382..144115389,+#_ef0848008da7a18a37873e78b0320066 | p@chr5:144115382..144115389, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr5:30710455..30710464,-#_ef0848008da7a18a37873e78b0320066 | p9@Otof |
| 1.87e-86 | FFCP PHASE2:Mm9::chr12:13572961..13572974,+#_ef0848008da7a18a37873e78b0320066 | p@chr12:13572961..13572974, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr19:22767090..22767099,+#_ef0848008da7a18a37873e78b0320066 | p18@Trpm3 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr14:102297747..102297765,+#_ef0848008da7a18a37873e78b0320066 | p@chr14:102297747..102297765, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr15:65641741..65641748,+#_ef0848008da7a18a37873e78b0320066 | p@chr15:65641741..65641748, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr7:139597684..139597691,+#_ef0848008da7a18a37873e78b0320066 | p@chr7:139597684..139597691, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr2:14685072..14685084,+#_ef0848008da7a18a37873e78b0320066 | p41@Cacnb2 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr2:136942131..136942142,-#_ef0848008da7a18a37873e78b0320066 | p6@Jag1 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr18:38104702..38104718,-#_ef0848008da7a18a37873e78b0320066 | p@chr18:38104702..38104718, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr17:27252925..27252939,+#_ef0848008da7a18a37873e78b0320066 | p@chr17:27252925..27252939, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr7:141605556..141605563,-#_ef0848008da7a18a37873e78b0320066 | p@chr7:141605556..141605563, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr1:194818647..194818660,-#_ef0848008da7a18a37873e78b0320066 | p@chr1:194818647..194818660, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr6:113251570..113251578,+#_ef0848008da7a18a37873e78b0320066 | p@chr6:113251570..113251578, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr7:27964761..27964768,+#_ef0848008da7a18a37873e78b0320066 | p@chr7:27964761..27964768, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr2:9811162..9811171,-#_ef0848008da7a18a37873e78b0320066 | p2@9230102O04Rik |
| 1.87e-86 | FFCP PHASE1:Mm9::chr13:43699188..43699216,+#_ef0848008da7a18a37873e78b0320066 | p@chr13:43699188..43699216, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr11:94371127..94371139,-#_ef0848008da7a18a37873e78b0320066 | p@chr11:94371127..94371139, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr8:13414289..13414295,+#_ef0848008da7a18a37873e78b0320066 | p@chr8:13414289..13414295, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr19:55255206..55255223,+#_ef0848008da7a18a37873e78b0320066 | p1@Tectb |
| 1.87e-86 | FFCP PHASE1:Mm9::chr13:78257491..78257498,+#_ef0848008da7a18a37873e78b0320066 | p@chr13:78257491..78257498, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr15:89215319..89215330,+#_ef0848008da7a18a37873e78b0320066 | p@chr15:89215319..89215330, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr7:109052297..109052300,-#_ef0848008da7a18a37873e78b0320066 | p2@Tomt |
| 1.87e-86 | FFCP PHASE2:Mm9::chr5:30710416..30710440,-#_ef0848008da7a18a37873e78b0320066 | p2@Otof |
| 1.87e-86 | FFCP PHASE2:Mm9::chr13:37195838..37195870,-#_ef0848008da7a18a37873e78b0320066 | p@chr13:37195838..37195870, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr15:103146966..103146971,-#_ef0848008da7a18a37873e78b0320066 | p@chr15:103146966..103146971, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr6:29428397..29428407,-#_ef0848008da7a18a37873e78b0320066 | p@chr6:29428397..29428407, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr4:115556939..115556945,+#_ef0848008da7a18a37873e78b0320066 | p4@Kncn |
| 1.87e-86 | FFCP PHASE2:Mm9::chr17:13983095..13983100,+#_ef0848008da7a18a37873e78b0320066 | p@chr17:13983095..13983100, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr2:75320183..75320189,+#_ef0848008da7a18a37873e78b0320066 | p@chr2:75320183..75320189, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr1:93218694..93218705,+#_ef0848008da7a18a37873e78b0320066 | p1@Espnl |
| 1.87e-86 | FFCP PHASE2:Mm9::chr1:94627290..94627299,-#_ef0848008da7a18a37873e78b0320066 | p@chr1:94627290..94627299, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr12:109905468..109905474,+#_ef0848008da7a18a37873e78b0320066 | p@chr12:109905468..109905474, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr10:107349392..107349413,-#_ef0848008da7a18a37873e78b0320066 | p2@Otogl |
| 1.87e-86 | FFCP PHASE2:Mm9::chr16:93971367..93971379,-#_ef0848008da7a18a37873e78b0320066 | p@chr16:93971367..93971379, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr1:16651649..16651655,+#_ef0848008da7a18a37873e78b0320066 | p@chr1:16651649..16651655, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr10:107156949..107156956,-#_ef0848008da7a18a37873e78b0320066 | p3@Ptprq |
| 1.87e-86 | FFCP PHASE1:Mm9::chr10:80806020..80806031,-#_ef0848008da7a18a37873e78b0320066 | p3@Gipc3 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr1:60561636..60561645,-#_ef0848008da7a18a37873e78b0320066 | p@chr1:60561636..60561645, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr2:121206695..121206711,-#_ef0848008da7a18a37873e78b0320066 | p1@Strc |
| 1.87e-86 | FFCP PHASE1:Mm9::chr6:30619443..30619450,-#_ef0848008da7a18a37873e78b0320066 | p13@Tsga14 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr11:102123554..102123566,+#_ef0848008da7a18a37873e78b0320066 | p4@BC030867 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr6:113251606..113251613,+#_ef0848008da7a18a37873e78b0320066 | p@chr6:113251606..113251613, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr2:170417150..170417155,-#_ef0848008da7a18a37873e78b0320066 | p@chr2:170417150..170417155, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr15:65641779..65641790,+#_ef0848008da7a18a37873e78b0320066 | p@chr15:65641779..65641790, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr18:66033526..66033539,-#_ef0848008da7a18a37873e78b0320066 | p@chr18:66033526..66033539, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr14:31283085..31283097,-#_ef0848008da7a18a37873e78b0320066 | p@chr14:31283085..31283097, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr11:75421384..75421397,+#_ef0848008da7a18a37873e78b0320066 | p@chr11:75421384..75421397, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr7:29733825..29733837,-#_ef0848008da7a18a37873e78b0320066 | p@chr7:29733825..29733837, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr3:69811590..69811601,+#_ef0848008da7a18a37873e78b0320066 | p1@Otol1 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr19:22767090..22767099,+#_ef0848008da7a18a37873e78b0320066 | p18@Trpm3 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr18:81314626..81314636,+#_ef0848008da7a18a37873e78b0320066 | p@chr18:81314626..81314636, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr2:75320183..75320189,+#_ef0848008da7a18a37873e78b0320066 | p@chr2:75320183..75320189, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr12:13508015..13508019,+#_ef0848008da7a18a37873e78b0320066 | p@chr12:13508015..13508019, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr16:45693840..45693856,-#_ef0848008da7a18a37873e78b0320066 | p1@Tmprss7 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr17:13983198..13983203,+#_ef0848008da7a18a37873e78b0320066 | p@chr17:13983198..13983203, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr15:12848147..12848162,+#_ef0848008da7a18a37873e78b0320066 | p@chr15:12848147..12848162, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr13:48087761..48087775,-#_ef0848008da7a18a37873e78b0320066 | p@chr13:48087761..48087775, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr3:154459231..154459240,+#_ef0848008da7a18a37873e78b0320066 | p@chr3:154459231..154459240, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr2:67011956..67011967,+#_ef0848008da7a18a37873e78b0320066 | p1@Gm1322 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr9:42207998..42208009,-#_ef0848008da7a18a37873e78b0320066 | p6@Tecta |
| 1.87e-86 | FFCP PHASE1:Mm9::chr6:86745686..86745727,-#_ef0848008da7a18a37873e78b0320066 | p@chr6:86745686..86745727, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr11:4689776..4689785,-#_ef0848008da7a18a37873e78b0320066 | p@chr11:4689776..4689785, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr3:69811590..69811601,+#_ef0848008da7a18a37873e78b0320066 | p1@Otol1 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr16:96494788..96494801,+#_ef0848008da7a18a37873e78b0320066 | p12@B3galt5 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr16:96494788..96494801,+#_ef0848008da7a18a37873e78b0320066 | p12@B3galt5 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr9:42207998..42208009,-#_ef0848008da7a18a37873e78b0320066 | p6@Tecta |
| 1.87e-86 | FFCP PHASE1:Mm9::chr1:94627290..94627299,-#_ef0848008da7a18a37873e78b0320066 | p@chr1:94627290..94627299, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr13:43699228..43699239,+#_ef0848008da7a18a37873e78b0320066 | p@chr13:43699228..43699239, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr15:58022966..58022995,-#_ef0848008da7a18a37873e78b0320066 | p@chr15:58022966..58022995, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr9:42207397..42207408,-#_ef0848008da7a18a37873e78b0320066 | p@chr9:42207397..42207408, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr8:125802236..125802251,-#_ef0848008da7a18a37873e78b0320066 | p3@Fanca |
| 1.87e-86 | FFCP PHASE1:Mm9::chr2:121206677..121206683,-#_ef0848008da7a18a37873e78b0320066 | p3@Strc |
| 1.87e-86 | FFCP PHASE1:Mm9::chr9:92087926..92087938,+#_ef0848008da7a18a37873e78b0320066 | p2@Plscr5 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr10:108316802..108316807,-#_ef0848008da7a18a37873e78b0320066 | p@chr10:108316802..108316807, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chrX:154140781..154140788,+#_ef0848008da7a18a37873e78b0320066 | p@chrX:154140781..154140788, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr1:172843847..172843880,-#_ef0848008da7a18a37873e78b0320066 | p@chr1:172843847..172843880, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr10:107349392..107349413,-#_ef0848008da7a18a37873e78b0320066 | p2@Otogl |
| 1.87e-86 | FFCP PHASE1:Mm9::chr9:42207397..42207408,-#_ef0848008da7a18a37873e78b0320066 | p@chr9:42207397..42207408, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr1:78523144..78523177,+#_ef0848008da7a18a37873e78b0320066 | p@chr1:78523144..78523177, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr9:41495920..41495928,-#_ef0848008da7a18a37873e78b0320066 | p@chr9:41495920..41495928, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr4:133802857..133802884,+#_ef0848008da7a18a37873e78b0320066 | p@chr4:133802857..133802884, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr3:154459246..154459253,+#_ef0848008da7a18a37873e78b0320066 | p@chr3:154459246..154459253, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr13:78322383..78322395,-#_ef0848008da7a18a37873e78b0320066 | p2@uc007rhb.1 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr1:182528388..182528403,+#_ef0848008da7a18a37873e78b0320066 | p@chr1:182528388..182528403, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr11:89702580..89702593,-#_ef0848008da7a18a37873e78b0320066 | p@chr11:89702580..89702593, - |
Property "Property value" (as page type) with input value "UBPROP:0000001 "Skeletal elements surrounding the membranous labyrinth of the inner ear. Sensory capsules anterolateral to and confluent with occipital arch.[AAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process., Property "Property value" (as page type) with input value "UBPROP:0000002 "relationship loss: part_of occipito-petrosal (AAO:0010831)[AAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process., Property "Property value" (as page type) with input value "UBPROP:0000002 "relationship loss: part_of otic and occipital (AAO:0000993)[AAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
