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{{UBERON
{{UBERON
|id=UBERON:0003067
|alt_id=UBERON:XAO_0000187-ZFA_0001310
|name=dorsolateral placode
|namespace=
|def="Lateral neurogenic placodes positioned dorsal of the epibranchial placodes." [ZFIN:curator]
|xref=TAO:0001310;;VHOG:0000103;;XAO:0000187;;ZFA:0001310
|is_a=UBERON:0009955
|synonym="dorsolateral placodes" EXACT PLURAL [ZFA:0001310]
|comment=
|comment=
|alt_id=UBERON:XAO_0000187-ZFA_0001310
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="Lateral neurogenic placodes positioned dorsal of the epibranchial placodes." [ZFIN:curator]
|subset=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=UBERON:0003067
|is_a=UBERON:0009955
|is_obsolete=
|located_in=
|located_in=
|name=dorsolateral placode
|namespace=FANTOM
|obo_creation_date=
|part_of=
|part_of=
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym="dorsolateral placodes" EXACT PLURAL [ZFA:0001310]
|union_of=
|xref=TAO:0001310;;VHOG:0000103;;XAO:0000187;;ZFA:0001310
}}
}}

Latest revision as of 17:36, 12 September 2014

Name:dorsolateral placode
Namespace:FANTOM
Definition:"Lateral neurogenic placodes positioned dorsal of the epibranchial placodes." [ZFIN:curator]
Xrefs:
links:

TAO:0001310
VHOG:0000103
XAO:0000187

ZFA:0001310
Synonyms: "dorsolateral placodes" EXACT PLURAL [ZFA:0001310]
Alt_id: UBERON:XAO_0000187-ZFA_0001310

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0009955(neurogenic placode)



Children

is a:UBERON:0003069 (otic placode)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology



Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0003067 (dorsolateral placode), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
1.87e-86FFCP PHASE2:Mm9::chr7:53496326..53496340,+#_6f69956b8073250c371333dfea6820cep1@Otog
1.87e-86FFCP PHASE2:Mm9::chr5:3909310..3909321,+#_6f69956b8073250c371333dfea6820cep@chr5:3909310..3909321, +
1.87e-86FFCP PHASE1:Mm9::chr11:8405038..8405048,-#_6f69956b8073250c371333dfea6820cep@chr11:8405038..8405048, -
1.87e-86FFCP PHASE1:Mm9::chr15:65641779..65641790,+#_6f69956b8073250c371333dfea6820cep@chr15:65641779..65641790, +
1.87e-86FFCP PHASE1:Mm9::chr5:144115382..144115389,+#_6f69956b8073250c371333dfea6820cep@chr5:144115382..144115389, +
1.87e-86FFCP PHASE1:Mm9::chr7:139597684..139597691,+#_6f69956b8073250c371333dfea6820cep@chr7:139597684..139597691, +
1.87e-86FFCP PHASE2:Mm9::chr8:13435173..13435186,+#_6f69956b8073250c371333dfea6820cep6@Fam70b
1.87e-86FFCP PHASE1:Mm9::chr1:60561636..60561645,-#_6f69956b8073250c371333dfea6820cep@chr1:60561636..60561645, -
1.87e-86FFCP PHASE2:Mm9::chr10:81091447..81091464,+#_6f69956b8073250c371333dfea6820cep9@Ankrd24
1.87e-86FFCP PHASE2:Mm9::chr1:78523144..78523177,+#_6f69956b8073250c371333dfea6820cep@chr1:78523144..78523177, +
1.87e-86FFCP PHASE1:Mm9::chr15:12848147..12848162,+#_6f69956b8073250c371333dfea6820cep@chr15:12848147..12848162, +
1.87e-86FFCP PHASE2:Mm9::chr7:133957514..133957529,+#_6f69956b8073250c371333dfea6820cep@chr7:133957514..133957529, +
1.87e-86FFCP PHASE2:Mm9::chr1:172843847..172843880,-#_6f69956b8073250c371333dfea6820cep@chr1:172843847..172843880, -
1.87e-86FFCP PHASE1:Mm9::chr12:77084875..77084885,+#_6f69956b8073250c371333dfea6820cep@chr12:77084875..77084885, +
1.87e-86FFCP PHASE1:Mm9::chr3:69811590..69811601,+#_6f69956b8073250c371333dfea6820cep1@Otol1
1.87e-86FFCP PHASE2:Mm9::chr10:107349378..107349390,-#_6f69956b8073250c371333dfea6820cep1@Otogl
1.87e-86FFCP PHASE1:Mm9::chr5:72652660..72652667,+#_6f69956b8073250c371333dfea6820cep@chr5:72652660..72652667, +
1.87e-86FFCP PHASE2:Mm9::chr17:13983198..13983203,+#_6f69956b8073250c371333dfea6820cep@chr17:13983198..13983203, +
1.87e-86FFCP PHASE1:Mm9::chr9:42207983..42207995,-#_6f69956b8073250c371333dfea6820cep3@Tecta
1.87e-86FFCP PHASE1:Mm9::chr7:53496326..53496340,+#_6f69956b8073250c371333dfea6820cep1@Otog
1.87e-86FFCP PHASE2:Mm9::chr6:30619443..30619450,-#_6f69956b8073250c371333dfea6820cep13@Tsga14
1.87e-86FFCP PHASE1:Mm9::chr17:13983198..13983203,+#_6f69956b8073250c371333dfea6820cep@chr17:13983198..13983203, +
1.87e-86FFCP PHASE2:Mm9::chr2:67011921..67011934,+#_6f69956b8073250c371333dfea6820cep2@Gm1322
1.87e-86FFCP PHASE2:Mm9::chr9:42207965..42207978,-#_6f69956b8073250c371333dfea6820cep5@Tecta
1.87e-86FFCP PHASE1:Mm9::chr2:121206677..121206683,-#_6f69956b8073250c371333dfea6820cep3@Strc
1.87e-86FFCP PHASE2:Mm9::chr11:102123554..102123566,+#_6f69956b8073250c371333dfea6820cep4@BC030867
1.87e-86FFCP PHASE1:Mm9::chr12:13508046..13508055,+#_6f69956b8073250c371333dfea6820cep@chr12:13508046..13508055, +
1.87e-86FFCP PHASE2:Mm9::chr5:144115382..144115389,+#_6f69956b8073250c371333dfea6820cep@chr5:144115382..144115389, +
1.87e-86FFCP PHASE1:Mm9::chr5:30710455..30710464,-#_6f69956b8073250c371333dfea6820cep9@Otof
1.87e-86FFCP PHASE1:Mm9::chr1:172843847..172843880,-#_6f69956b8073250c371333dfea6820cep@chr1:172843847..172843880, -
1.87e-86FFCP PHASE1:Mm9::chr9:42207375..42207384,-#_6f69956b8073250c371333dfea6820cep@chr9:42207375..42207384, -
1.87e-86FFCP PHASE1:Mm9::chr13:37195838..37195870,-#_6f69956b8073250c371333dfea6820cep@chr13:37195838..37195870, -
1.87e-86FFCP PHASE1:Mm9::chr16:96494788..96494801,+#_6f69956b8073250c371333dfea6820cep12@B3galt5
1.87e-86FFCP PHASE2:Mm9::chr9:42206784..42206793,-#_6f69956b8073250c371333dfea6820cep@chr9:42206784..42206793, -
1.87e-86FFCP PHASE2:Mm9::chr19:55255289..55255299,+#_6f69956b8073250c371333dfea6820cep2@Tectb
1.87e-86FFCP PHASE1:Mm9::chr1:94627290..94627299,-#_6f69956b8073250c371333dfea6820cep@chr1:94627290..94627299, -
1.87e-86FFCP PHASE2:Mm9::chr11:120222470..120222516,+#_6f69956b8073250c371333dfea6820cep2@Fscn2
1.87e-86FFCP PHASE2:Mm9::chr13:78257518..78257522,+#_6f69956b8073250c371333dfea6820cep@chr13:78257518..78257522, +
1.87e-86FFCP PHASE2:Mm9::chr1:16651649..16651655,+#_6f69956b8073250c371333dfea6820cep@chr1:16651649..16651655, +
1.87e-86FFCP PHASE1:Mm9::chr3:154459246..154459253,+#_6f69956b8073250c371333dfea6820cep@chr3:154459246..154459253, +
1.87e-86FFCP PHASE2:Mm9::chr2:29935952..29935993,+#_6f69956b8073250c371333dfea6820cep7@Pkn3
1.87e-86FFCP PHASE1:Mm9::chr7:141605556..141605563,-#_6f69956b8073250c371333dfea6820cep@chr7:141605556..141605563, -
1.87e-86FFCP PHASE2:Mm9::chr1:93235228..93235249,+#_6f69956b8073250c371333dfea6820cep@chr1:93235228..93235249, +
1.87e-86FFCP PHASE2:Mm9::chr15:12848147..12848162,+#_6f69956b8073250c371333dfea6820cep@chr15:12848147..12848162, +
1.87e-86FFCP PHASE1:Mm9::chr11:11599532..11599539,-#_6f69956b8073250c371333dfea6820cep@chr11:11599532..11599539, -
1.87e-86FFCP PHASE1:Mm9::chr1:78523144..78523177,+#_6f69956b8073250c371333dfea6820cep@chr1:78523144..78523177, +
1.87e-86FFCP PHASE2:Mm9::chr14:102297747..102297765,+#_6f69956b8073250c371333dfea6820cep@chr14:102297747..102297765, +
1.87e-86FFCP PHASE1:Mm9::chr10:107349309..107349318,-#_6f69956b8073250c371333dfea6820cep4@Otogl
1.87e-86FFCP PHASE2:Mm9::chr2:14685072..14685084,+#_6f69956b8073250c371333dfea6820cep41@Cacnb2
1.87e-86FFCP PHASE2:Mm9::chr7:109052297..109052300,-#_6f69956b8073250c371333dfea6820cep2@Tomt
1.87e-86FFCP PHASE1:Mm9::chr15:58022966..58022995,-#_6f69956b8073250c371333dfea6820cep@chr15:58022966..58022995, -
1.87e-86FFCP PHASE2:Mm9::chr5:30710416..30710440,-#_6f69956b8073250c371333dfea6820cep2@Otof
1.87e-86FFCP PHASE2:Mm9::chr19:21028739..21028785,-#_6f69956b8073250c371333dfea6820cep1@Tmc1
1.87e-86FFCP PHASE1:Mm9::chr18:42158627..42158630,-#_6f69956b8073250c371333dfea6820cep@chr18:42158627..42158630, -
1.87e-86FFCP PHASE1:Mm9::chr6:113251570..113251578,+#_6f69956b8073250c371333dfea6820cep@chr6:113251570..113251578, +
1.87e-86FFCP PHASE2:Mm9::chr2:9811162..9811171,-#_6f69956b8073250c371333dfea6820cep2@9230102O04Rik
1.87e-86FFCP PHASE1:Mm9::chr2:53464168..53464175,+#_6f69956b8073250c371333dfea6820cep@chr2:53464168..53464175, +
1.87e-86FFCP PHASE1:Mm9::chr8:13414289..13414295,+#_6f69956b8073250c371333dfea6820cep@chr8:13414289..13414295, +
1.87e-86FFCP PHASE2:Mm9::chr15:89215306..89215315,+#_6f69956b8073250c371333dfea6820cep@chr15:89215306..89215315, +
1.87e-86FFCP PHASE1:Mm9::chr19:55255289..55255299,+#_6f69956b8073250c371333dfea6820cep2@Tectb
1.87e-86FFCP PHASE1:Mm9::chr13:78257518..78257522,+#_6f69956b8073250c371333dfea6820cep@chr13:78257518..78257522, +
1.87e-86FFCP PHASE2:Mm9::chr16:93971367..93971379,-#_6f69956b8073250c371333dfea6820cep@chr16:93971367..93971379, -
1.87e-86FFCP PHASE1:Mm9::chr15:97806034..97806061,+#_6f69956b8073250c371333dfea6820cep@chr15:97806034..97806061, +
1.87e-86FFCP PHASE2:Mm9::chr10:107156949..107156956,-#_6f69956b8073250c371333dfea6820cep3@Ptprq
1.87e-86FFCP PHASE1:Mm9::chr14:31283072..31283081,-#_6f69956b8073250c371333dfea6820cep@chr14:31283072..31283081, -
1.87e-86FFCP PHASE2:Mm9::chr17:13983095..13983100,+#_6f69956b8073250c371333dfea6820cep@chr17:13983095..13983100, +
1.87e-86FFCP PHASE2:Mm9::chr17:31335953..31335957,-#_6f69956b8073250c371333dfea6820cep3@Tmprss3
1.87e-86FFCP PHASE1:Mm9::chr4:130461150..130461185,+#_6f69956b8073250c371333dfea6820cep@chr4:130461150..130461185, +
1.87e-86FFCP PHASE1:Mm9::chr17:13983095..13983100,+#_6f69956b8073250c371333dfea6820cep@chr17:13983095..13983100, +
1.87e-86FFCP PHASE2:Mm9::chr9:42207792..42207805,-#_6f69956b8073250c371333dfea6820cep11@Tecta
1.87e-86FFCP PHASE2:Mm9::chr14:31283085..31283097,-#_6f69956b8073250c371333dfea6820cep@chr14:31283085..31283097, -
1.87e-86FFCP PHASE2:Mm9::chr4:101908153..101908163,+#_6f69956b8073250c371333dfea6820cep@chr4:101908153..101908163, +
1.87e-86FFCP PHASE2:Mm9::chr3:69811590..69811601,+#_6f69956b8073250c371333dfea6820cep1@Otol1
1.87e-86FFCP PHASE1:Mm9::chr15:85334335..85334353,+#_6f69956b8073250c371333dfea6820cep@chr15:85334335..85334353, +
1.87e-86FFCP PHASE2:Mm9::chr8:13414289..13414295,+#_6f69956b8073250c371333dfea6820cep@chr8:13414289..13414295, +
1.87e-86FFCP PHASE2:Mm9::chr9:66860888..66860899,+#_6f69956b8073250c371333dfea6820cep@chr9:66860888..66860899, +
1.87e-86FFCP PHASE2:Mm9::chr2:53464178..53464186,+#_6f69956b8073250c371333dfea6820cep@chr2:53464178..53464186, +
1.87e-86FFCP PHASE2:Mm9::chr2:121206695..121206711,-#_6f69956b8073250c371333dfea6820cep1@Strc
1.87e-86FFCP PHASE1:Mm9::chr6:30619443..30619450,-#_6f69956b8073250c371333dfea6820cep13@Tsga14
1.87e-86FFCP PHASE1:Mm9::chr1:93235228..93235249,+#_6f69956b8073250c371333dfea6820cep@chr1:93235228..93235249, +
1.87e-86FFCP PHASE2:Mm9::chr12:109905399..109905416,+#_6f69956b8073250c371333dfea6820cep@chr12:109905399..109905416, +
1.87e-86FFCP PHASE1:Mm9::chr2:152453066..152453075,-#_6f69956b8073250c371333dfea6820cep@chr2:152453066..152453075, -
1.87e-86FFCP PHASE2:Mm9::chr16:96494788..96494801,+#_6f69956b8073250c371333dfea6820cep12@B3galt5
1.87e-86FFCP PHASE1:Mm9::chr4:101908153..101908163,+#_6f69956b8073250c371333dfea6820cep@chr4:101908153..101908163, +
1.87e-86FFCP PHASE2:Mm9::chr16:45693840..45693856,-#_6f69956b8073250c371333dfea6820cep1@Tmprss7
1.87e-86FFCP PHASE2:Mm9::chr10:97109753..97109764,+#_6f69956b8073250c371333dfea6820cep3@Epyc
1.87e-86FFCP PHASE1:Mm9::chr11:114603036..114603048,+#_6f69956b8073250c371333dfea6820cep@chr11:114603036..114603048, +
1.87e-86FFCP PHASE1:Mm9::chr1:63733478..63733491,-#_6f69956b8073250c371333dfea6820cep1@Dytn
1.87e-86FFCP PHASE2:Mm9::chr6:113251570..113251578,+#_6f69956b8073250c371333dfea6820cep@chr6:113251570..113251578, +
1.87e-86FFCP PHASE1:Mm9::chr6:86745686..86745727,-#_6f69956b8073250c371333dfea6820cep@chr6:86745686..86745727, -
1.87e-86FFCP PHASE2:Mm9::chr13:76964459..76964469,+#_6f69956b8073250c371333dfea6820cep15@Mctp1
1.87e-86FFCP PHASE1:Mm9::chr9:92087926..92087938,+#_6f69956b8073250c371333dfea6820cep2@Plscr5
1.87e-86FFCP PHASE2:Mm9::chr2:73232344..73232356,-#_6f69956b8073250c371333dfea6820cep@chr2:73232344..73232356, -
1.87e-86FFCP PHASE2:Mm9::chr1:172843885..172843890,-#_6f69956b8073250c371333dfea6820cep@chr1:172843885..172843890, -
1.87e-86FFCP PHASE1:Mm9::chr3:69811606..69811616,+#_6f69956b8073250c371333dfea6820cep2@Otol1
1.87e-86FFCP PHASE2:Mm9::chr10:107349392..107349413,-#_6f69956b8073250c371333dfea6820cep2@Otogl
1.87e-86FFCP PHASE1:Mm9::chr2:29935952..29935993,+#_6f69956b8073250c371333dfea6820cep7@Pkn3
1.87e-86FFCP PHASE1:Mm9::chr9:42207998..42208009,-#_6f69956b8073250c371333dfea6820cep6@Tecta
1.87e-86FFCP PHASE1:Mm9::chr8:125802236..125802251,-#_6f69956b8073250c371333dfea6820cep3@Fanca
1.87e-86FFCP PHASE2:Mm9::chr3:154459184..154459195,+#_6f69956b8073250c371333dfea6820cep@chr3:154459184..154459195, +

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