Personal tools

UBERON:0003022: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
Line 1: Line 1:
{{UBERON
{{UBERON
|id=UBERON:0003022
|alt_id=UBERON:NIF_GrossAnatomy_birnlex_922-FMA_68603
|name=lobe parts of cerebral cortex
|anatomical_img_id=FMA:68603
|namespace=
|def=
|xref=FMA:68603;;NIF_GrossAnatomy:birnlex_922
|is_a=UBERON:0002619
|synonym="cerebral cortical segment" RELATED [FMA:68603];;"regional organ part of cerebral cortex" RELATED [FMA:68603];;"segment of cerebral cortex" RELATED [NIF_GrossAnatomy:birnlex_922]
|comment=check w.r.t regional part of cerebreal cortex
|comment=check w.r.t regional part of cerebreal cortex
|alt_id=UBERON:NIF_GrossAnatomy_birnlex_922-FMA_68603
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def=
|subset=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=UBERON:0003022
|is_a=UBERON:0002619
|is_obsolete=
|located_in=
|located_in=
|name=lobe parts of cerebral cortex
|namespace=
|obo_creation_date=
|part_of=
|part_of=
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym="cerebral cortical segment" RELATED [FMA:68603];;"regional organ part of cerebral cortex" RELATED [FMA:68603];;"segment of cerebral cortex" RELATED [NIF_GrossAnatomy:birnlex_922]
|union_of=
|xref=FMA:68603;;NIF_GrossAnatomy:birnlex_922
}}
}}

Latest revision as of 18:43, 29 November 2012

Name:lobe parts of cerebral cortex
Xrefs:
links:

FMA:68603

NIF_GrossAnatomy:birnlex_922
Synonyms: "cerebral cortical segment" RELATED [FMA:68603]
"regional organ part of cerebral cortex" RELATED [FMA:68603]
"segment of cerebral cortex" RELATED [NIF_GrossAnatomy:birnlex_922]
Comments:check w.r.t regional part of cerebreal cortex
Alt_id: UBERON:NIF_GrossAnatomy_birnlex_922-FMA_68603

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0002619(regional part of cerebral cortex)



Children NA

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0003022 (lobe parts of cerebral cortex), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
5.68e-99FFCP PHASE1:Hg19::chr2:149881275..149881284,+#_a746f1df189c7ff6455c4f9d6f0b6d01p@chr2:149881275..149881284, +
5.68e-99FFCP PHASE2:Hg19::chrX:148561320..148561329,-#_a746f1df189c7ff6455c4f9d6f0b6d01p@chrX:148561320..148561329, -
5.68e-99FFCP PHASE1:Hg19::chrX:148561320..148561329,-#_a746f1df189c7ff6455c4f9d6f0b6d01p@chrX:148561320..148561329, -
5.68e-99FFCP PHASE2:Hg19::chr2:149881275..149881284,+#_a746f1df189c7ff6455c4f9d6f0b6d01p@chr2:149881275..149881284, +
1.55e-98FFCP PHASE1:Hg19::chr6:132937900..132937907,-#_e9000b48285c4bcf6c7ba60eb0f04f37p@chr6:132937900..132937907, -
1.55e-98FFCP PHASE2:Hg19::chrX:110464144..110464149,+#_e9000b48285c4bcf6c7ba60eb0f04f37p@chrX:110464144..110464149, +
1.55e-98FFCP PHASE1:Hg19::chrX:110464144..110464149,+#_e9000b48285c4bcf6c7ba60eb0f04f37p@chrX:110464144..110464149, +
1.55e-98FFCP PHASE2:Hg19::chr2:187628574..187628585,+#_e9000b48285c4bcf6c7ba60eb0f04f37p@chr2:187628574..187628585, +
1.55e-98FFCP PHASE1:Hg19::chr2:187628574..187628585,+#_e9000b48285c4bcf6c7ba60eb0f04f37p@chr2:187628574..187628585, +
1.55e-98FFCP PHASE2:Hg19::chr6:132937900..132937907,-#_e9000b48285c4bcf6c7ba60eb0f04f37p@chr6:132937900..132937907, -
4.22e-98FFCP PHASE1:Hg19::chr5:119669127..119669137,-#_a362e69fce3aedac1970ef57a6f2c919p4@ENST00000514240
4.22e-98FFCP PHASE2:Hg19::chr3:172166557..172166598,+#_a362e69fce3aedac1970ef57a6f2c919p@chr3:172166557..172166598, +
4.22e-98FFCP PHASE2:Hg19::chr3:71777824..71777833,-#_a362e69fce3aedac1970ef57a6f2c919p28@EIF4E3
4.22e-98FFCP PHASE1:Hg19::chr3:172166557..172166598,+#_a362e69fce3aedac1970ef57a6f2c919p@chr3:172166557..172166598, +
4.22e-98FFCP PHASE2:Hg19::chr11:79784329..79784335,-#_a362e69fce3aedac1970ef57a6f2c919p@chr11:79784329..79784335, -
4.22e-98FFCP PHASE1:Hg19::chr3:71777824..71777833,-#_a362e69fce3aedac1970ef57a6f2c919p28@EIF4E3
4.22e-98FFCP PHASE1:Hg19::chr11:79784329..79784335,-#_a362e69fce3aedac1970ef57a6f2c919p@chr11:79784329..79784335, -
4.22e-98FFCP PHASE2:Hg19::chr5:119669127..119669137,-#_a362e69fce3aedac1970ef57a6f2c919p4@ENST00000514240
7.79e-79FFCP PHASE2:Hg19::chr18:24435190..24435201,-#_8d3dd156575fead153b2fc0d6d0c2737p@chr18:24435190..24435201, -
7.79e-79FFCP PHASE1:Hg19::chr18:24435190..24435201,-#_8d3dd156575fead153b2fc0d6d0c2737p@chr18:24435190..24435201, -
7.41e-67FFCP PHASE2:Hg19::chr10:125454018..125454027,+#_60a883c40c41b3a247e915c949337ed5p@chr10:125454018..125454027, +
7.41e-67FFCP PHASE1:Hg19::chr10:125454018..125454027,+#_60a883c40c41b3a247e915c949337ed5p@chr10:125454018..125454027, +
1.04e-66FFCP PHASE1:Hg19::chr3:12225071..12225084,+#_85b4f581f72edd700e10470e5d2c08a4p15@SYN2
1.04e-66FFCP PHASE2:Hg19::chr3:12225071..12225084,+#_85b4f581f72edd700e10470e5d2c08a4p15@SYN2
7.73e-66FFCP PHASE2:Hg19::chrX:72432586..72432597,-#_e07256af20a3e9c7e1bca84bbedf4485p@chrX:72432586..72432597, -
7.73e-66FFCP PHASE1:Hg19::chrX:72432586..72432597,-#_e07256af20a3e9c7e1bca84bbedf4485p@chrX:72432586..72432597, -
2.02e-57FFCP PHASE2:Hg19::chr7:130745294..130745303,-#_8ff7fa9736ba45ae198585c60e266867p@chr7:130745294..130745303, -
2.02e-57FFCP PHASE2:Hg19::chrX:13789306..13789315,-#_8ff7fa9736ba45ae198585c60e266867p@chrX:13789306..13789315, -
2.02e-57FFCP PHASE1:Hg19::chr7:130745294..130745303,-#_8ff7fa9736ba45ae198585c60e266867p@chr7:130745294..130745303, -
2.02e-57FFCP PHASE1:Hg19::chrX:13789306..13789315,-#_8ff7fa9736ba45ae198585c60e266867p@chrX:13789306..13789315, -
2.69e-57FFCP PHASE2:Hg19::chr19:49932793..49932820,-#_f4358a6040f8413ad35fd27c5bdf1730p@chr19:49932793..49932820, -
2.69e-57FFCP PHASE1:Hg19::chr19:49932793..49932820,-#_f4358a6040f8413ad35fd27c5bdf1730p@chr19:49932793..49932820, -
3.58e-57FFCP PHASE2:Hg19::chr5:111964224..111964247,+#_b74bcbd889f5308e0fae9d665866903bp1@ENST00000507565
3.58e-57FFCP PHASE1:Hg19::chr5:111964224..111964247,+#_b74bcbd889f5308e0fae9d665866903bp1@ENST00000507565
3.58e-57FFCP PHASE2:Hg19::chr2:79601075..79601083,+#_b74bcbd889f5308e0fae9d665866903bp@chr2:79601075..79601083, +
3.58e-57FFCP PHASE1:Hg19::chr2:79601075..79601083,+#_b74bcbd889f5308e0fae9d665866903bp@chr2:79601075..79601083, +
4.77e-57FFCP PHASE1:Hg19::chr7:22158177..22158186,-#_039c0598939d52a5eeeb49f8331d5923p@chr7:22158177..22158186, -
4.77e-57FFCP PHASE2:Hg19::chr7:22158177..22158186,-#_039c0598939d52a5eeeb49f8331d5923p@chr7:22158177..22158186, -
6.36e-57FFCP PHASE2:Hg19::chr8:42981738..42981749,+#_8041705ce46635c9f7ae1205f7b08aacp4@AK056481
6.36e-57FFCP PHASE1:Hg19::chr8:42981738..42981749,+#_8041705ce46635c9f7ae1205f7b08aacp4@AK056481
8.82e-51FFCP PHASE1:Hg19::chr5:82155710..82155724,-#_08a6a98a9ed8ca23df070b66f4eda525p@chr5:82155710..82155724, -
8.82e-51FFCP PHASE2:Hg19::chr5:82155710..82155724,-#_08a6a98a9ed8ca23df070b66f4eda525p@chr5:82155710..82155724, -
1.14e-50FFCP PHASE1:Hg19::chr15:43814895..43814906,+#_74ae1188db941072837a6b186d51d84fp35@MAP1A
1.14e-50FFCP PHASE2:Hg19::chr17:27901500..27901511,-#_74ae1188db941072837a6b186d51d84fp25@GIT1
1.14e-50FFCP PHASE2:Hg19::chr15:43814895..43814906,+#_74ae1188db941072837a6b186d51d84fp35@MAP1A
1.14e-50FFCP PHASE1:Hg19::chr17:27901500..27901511,-#_74ae1188db941072837a6b186d51d84fp25@GIT1
2.42e-50FFCP PHASE2:Hg19::chr13:101712292..101712306,-#_7f66526b53d49f7552ed10a8e4133bcbp@chr13:101712292..101712306, -
2.42e-50FFCP PHASE1:Hg19::chr13:101712292..101712306,-#_7f66526b53d49f7552ed10a8e4133bcbp@chr13:101712292..101712306, -
2.74e-50FFCP PHASE2:Hg19::chr3:131756644..131756651,-#_20344be9ad63f53189d277fd21300c93p13@CPNE4
2.74e-50FFCP PHASE1:Hg19::chr3:131756632..131756637,-#_20344be9ad63f53189d277fd21300c93p11@CPNE4
2.74e-50FFCP PHASE2:Hg19::chr19:49932741..49932746,-#_20344be9ad63f53189d277fd21300c93p@chr19:49932741..49932746, -
2.74e-50FFCP PHASE1:Hg19::chr3:131756644..131756651,-#_20344be9ad63f53189d277fd21300c93p13@CPNE4
2.74e-50FFCP PHASE1:Hg19::chr19:49932741..49932746,-#_20344be9ad63f53189d277fd21300c93p@chr19:49932741..49932746, -
2.74e-50FFCP PHASE2:Hg19::chr16:7240507..7240509,+#_20344be9ad63f53189d277fd21300c93p@chr16:7240507..7240509, +
2.74e-50FFCP PHASE2:Hg19::chr3:131756632..131756637,-#_20344be9ad63f53189d277fd21300c93p11@CPNE4
2.74e-50FFCP PHASE1:Hg19::chr16:7240507..7240509,+#_20344be9ad63f53189d277fd21300c93p@chr16:7240507..7240509, +
3.11e-50FFCP PHASE2:Hg19::chr11:123502588..123502633,-#_8dd9cfe84d84ddc95c55b90eeeba0d42p16@SCN3B
3.11e-50FFCP PHASE1:Hg19::chr11:123502588..123502633,-#_8dd9cfe84d84ddc95c55b90eeeba0d42p16@SCN3B
4.0e-50FFCP PHASE2:Hg19::chr3:58552313..58552322,-#_2d9384da9a1032d98f8c9fa0b8f131f7p@chr3:58552313..58552322, -
4.0e-50FFCP PHASE1:Hg19::chr3:58552313..58552322,-#_2d9384da9a1032d98f8c9fa0b8f131f7p@chr3:58552313..58552322, -
4.52e-50FFCP PHASE2:Hg19::chr19:4772190..4772197,+#_fadee4c3621700073231556fa0338938p@chr19:4772190..4772197, +
4.52e-50FFCP PHASE1:Hg19::chr20:44330800..44330802,-#_fadee4c3621700073231556fa0338938p@chr20:44330800..44330802, -
4.52e-50FFCP PHASE1:Hg19::chr7:98460933..98460941,-#_fadee4c3621700073231556fa0338938p19@TMEM130
4.52e-50FFCP PHASE1:Hg19::chr19:4772190..4772197,+#_fadee4c3621700073231556fa0338938p@chr19:4772190..4772197, +
4.52e-50FFCP PHASE2:Hg19::chr1:99772065..99772074,+#_fadee4c3621700073231556fa0338938p13@LPPR4
4.52e-50FFCP PHASE1:Hg19::chr8:26365361..26365372,-#_fadee4c3621700073231556fa0338938p5@PNMA2
4.52e-50FFCP PHASE1:Hg19::chr21:27650939..27650945,-#_fadee4c3621700073231556fa0338938p@chr21:27650939..27650945, -
4.52e-50FFCP PHASE2:Hg19::chr18:24433388..24433397,-#_fadee4c3621700073231556fa0338938p20@AQP4
4.52e-50FFCP PHASE1:Hg19::chr18:24433388..24433397,-#_fadee4c3621700073231556fa0338938p20@AQP4
4.52e-50FFCP PHASE1:Hg19::chr1:99772065..99772074,+#_fadee4c3621700073231556fa0338938p13@LPPR4
4.52e-50FFCP PHASE2:Hg19::chr21:27651095..27651104,+#_fadee4c3621700073231556fa0338938p@chr21:27651095..27651104, +
4.52e-50FFCP PHASE2:Hg19::chr8:81570615..81570619,-#_fadee4c3621700073231556fa0338938p@chr8:81570615..81570619, -
4.52e-50FFCP PHASE2:Hg19::chrX:152095682..152095708,-#_fadee4c3621700073231556fa0338938p@chrX:152095682..152095708, -
4.52e-50FFCP PHASE1:Hg19::chr21:27651095..27651104,+#_fadee4c3621700073231556fa0338938p@chr21:27651095..27651104, +
4.52e-50FFCP PHASE1:Hg19::chrX:152095682..152095708,-#_fadee4c3621700073231556fa0338938p@chrX:152095682..152095708, -
4.52e-50FFCP PHASE2:Hg19::chr7:98460933..98460941,-#_fadee4c3621700073231556fa0338938p19@TMEM130
4.52e-50FFCP PHASE1:Hg19::chr8:81570615..81570619,-#_fadee4c3621700073231556fa0338938p@chr8:81570615..81570619, -
4.52e-50FFCP PHASE2:Hg19::chr20:44330800..44330802,-#_fadee4c3621700073231556fa0338938p@chr20:44330800..44330802, -
4.52e-50FFCP PHASE2:Hg19::chr21:27650939..27650945,-#_fadee4c3621700073231556fa0338938p@chr21:27650939..27650945, -
4.52e-50FFCP PHASE2:Hg19::chr8:26365361..26365372,-#_fadee4c3621700073231556fa0338938p5@PNMA2
5.15e-50FFCP PHASE1:Hg19::chr14:24037817..24037858,-#_df8e900e8e447d48bfbb74f0d3bbc443p@chr14:24037817..24037858, -
5.15e-50FFCP PHASE2:Hg19::chr14:24037817..24037858,-#_df8e900e8e447d48bfbb74f0d3bbc443p@chr14:24037817..24037858, -
6.61e-50FFCP PHASE1:Hg19::chr12:41234328..41234338,+#_9c2a841d465d9cbb824ec5655da09742p@chr12:41234328..41234338, +
6.61e-50FFCP PHASE2:Hg19::chr12:41234328..41234338,+#_9c2a841d465d9cbb824ec5655da09742p@chr12:41234328..41234338, +
3.19e-45FFCP PHASE2:Hg19::chr12:79843202..79843213,+#_233250377290c96e1c701c902a09c2aep@chr12:79843202..79843213, +
3.19e-45FFCP PHASE2:Hg19::chr19:3294647..3294651,+#_233250377290c96e1c701c902a09c2aep@chr19:3294647..3294651, +
3.19e-45FFCP PHASE1:Hg19::chr19:3294647..3294651,+#_233250377290c96e1c701c902a09c2aep@chr19:3294647..3294651, +
3.19e-45FFCP PHASE1:Hg19::chr12:79843202..79843213,+#_233250377290c96e1c701c902a09c2aep@chr12:79843202..79843213, +
6.26e-45FFCP PHASE1:Hg19::chr9:87426979..87426990,+#_4f911fc007a7e6640f8611b6b8cade19p54@NTRK2
6.26e-45FFCP PHASE2:Hg19::chr5:63258078..63258088,-#_4f911fc007a7e6640f8611b6b8cade19p6@HTR1A
6.26e-45FFCP PHASE2:Hg19::chr8:27316567..27316576,+#_4f911fc007a7e6640f8611b6b8cade19p@chr8:27316567..27316576, +
6.26e-45FFCP PHASE1:Hg19::chr5:63258078..63258088,-#_4f911fc007a7e6640f8611b6b8cade19p6@HTR1A
6.26e-45FFCP PHASE1:Hg19::chr8:27316567..27316576,+#_4f911fc007a7e6640f8611b6b8cade19p@chr8:27316567..27316576, +
6.26e-45FFCP PHASE2:Hg19::chr9:87426979..87426990,+#_4f911fc007a7e6640f8611b6b8cade19p54@NTRK2
7.83e-45FFCP PHASE1:Hg19::chr1:160112787..160112798,+#_144f3e6bcc962952391c46e6f1bc9d34p12@ATP1A2
7.83e-45FFCP PHASE1:Hg19::chr5:63258105..63258124,-#_144f3e6bcc962952391c46e6f1bc9d34p2@HTR1A
7.83e-45FFCP PHASE2:Hg19::chr2:101965038..101965076,-#_144f3e6bcc962952391c46e6f1bc9d34p@chr2:101965038..101965076, -
7.83e-45FFCP PHASE1:Hg19::chr2:101965038..101965076,-#_144f3e6bcc962952391c46e6f1bc9d34p@chr2:101965038..101965076, -
7.83e-45FFCP PHASE2:Hg19::chr1:160112787..160112798,+#_144f3e6bcc962952391c46e6f1bc9d34p12@ATP1A2
7.83e-45FFCP PHASE2:Hg19::chr5:63258105..63258124,-#_144f3e6bcc962952391c46e6f1bc9d34p2@HTR1A

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=UBERON:0003022&oldid=2565167"