UBERON:0002376: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| (3 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{UBERON | {{UBERON | ||
| | |alt_id=UBERON:FMA_9616-MA_0000578-ZFA_0000328 | ||
| | |anatomical_img_id=FMA:9616 | ||
|comment=TODO - check ZFA | |comment=TODO - check ZFA | ||
|created_by= | |created_by= | ||
| | |def="Muscle organ which is a part of the head. Examples: masseter, orbicularis oculi.[FMA]" [FMA:9616] | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from=UBERON:0006904 | ||
|disjoint_from= | |||
|has_quality= | |has_quality= | ||
|id=UBERON:0002376 | |||
|is_a=UBERON:0010959 | |||
|is_obsolete= | |||
|located_in= | |located_in= | ||
|part_of= | |name=cranial muscle | ||
|namespace=FANTOM | |||
|obo_creation_date= | |||
|part_of=UBERON:0000033;;UBERON:0004461 | |||
|preceded_by= | |||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
| | |subset=uberon_slim;;vertebrate_core | ||
| | |synonym="adult head muscle organ" EXACT [OBOL:automatic];;"cephalic muscle" EXACT [ZFA:0001652];;"cephalic musculature" EXACT [];;"cranial muscle " RELATED [ZFA:0001652];;"head muscle" EXACT [];;"head muscle organ" EXACT [OBOL:automatic];;"head muscles" RELATED [];;"muscle organ of adult head" EXACT [OBOL:automatic];;"muscle organ of head" EXACT [OBOL:automatic];;"musculus caput" EXACT [] | ||
|union_of= | |||
|xref=AAO:0000107;;BTO:0000021;;EFO:0003524;;EHDAA2:0000322;;EMAPA:18171;;FMA:9616;;MA:0000578;;TAO:0000328;;ZFA:0000328;;ZFA:0001652 | |||
}} | }} | ||
Latest revision as of 17:30, 12 September 2014
| Name: | cranial muscle | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "Muscle organ which is a part of the head. Examples: masseter, orbicularis oculi.[FMA]" [FMA:9616] | ||
| Xrefs: |
| ||
| Synonyms: |
"adult head muscle organ" EXACT [OBOL:automatic] "cephalic muscle" EXACT [ZFA:0001652] "cephalic musculature" EXACT [] "cranial muscle " RELATED [ZFA:0001652] "head muscle" EXACT [] "head muscle organ" EXACT [OBOL:automatic] "head muscles" RELATED [] "muscle organ of adult head" EXACT [OBOL:automatic] "muscle organ of head" EXACT [OBOL:automatic] "musculus caput" EXACT [] | ||
| Comments: | TODO - check ZFA | ||
| Alt_id: | UBERON:FMA_9616-MA_0000578-ZFA_0000328 | ||
| Subset: |
uberon_slim vertebrate_core |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0010959(craniocervical muscle) |
|---|---|
| develops_from: | UBERON:0006904(head mesenchyme from mesoderm) |
| part_of: | UBERON:0000033(head),UBERON:0004461(musculature of head) |
Children
| is a: | UBERON:0001577 (muscle of face) |
|---|---|
| part of: | UBERON:0001602 (medial rectus extraocular muscle) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10269-104D8
- 10270-104D9
- 10271-104E1
- 10272-104E2 (eye - muscle inferior rectus, donor1)
- 10297-104G9 (eye - muscle superior, donor2)
- 10298-104H1 (eye - muscle lateral, donor2)
- 10299-104H2 (eye - muscle medial, donor2)
- 10300-104H3
- 10325-105B1
- 10326-105B2
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0002376 (cranial muscle), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
No analysis results
