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{{UBERON
{{UBERON
|id=UBERON:0000079
|alt_id=
|name=male reproductive system
|anatomical_img_id=FMA:45664
|namespace=
|def="the organs associated with producing offspring in the gender that produces spermatozoa." [MP:0001145]
|xref=BTO:0000082;;EFO:0000970;;EHDAA2:0001054;;EHDAA:8136;;EMAPA:17968;;EV:0100101;;FBbt:00004927;;FMA:45664;;GAID:386;;HAO:0000505;;MA:0000396;;MESH:A.05.360.444;;ncithesaurus:Male_Genitalia;;ncithesaurus:Male_Reproductive_System;;OpenCyc:Mx4rvViCepwpEbGdrcN5Y29ycA;;SCTID:361340001;;TGMA:0000634;;VHOG:0000725;;WBbt:0008423;;XAO:0000155
|is_a=UBERON:0000990
|synonym="genitalia of male organism" EXACT [OBOL:automatic];;"male genital organ" RELATED [BTO:0000082];;"male genital system" EXACT [FMA:45664];;"male genitalia" EXACT [];;"male genitals" EXACT [];;"male organism genitalia" EXACT [OBOL:automatic];;"male organism reproductive system" EXACT [OBOL:automatic];;"male reproductive tract" RELATED [MA:0000396];;"reproductive system of male organism" EXACT [OBOL:automatic];;"systema genitale masculinum" RELATED [BTO:0000082]
|comment=
|comment=
|alt_id=
|disjoint_from=UBERON:0000474
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="the organs associated with producing offspring in the gender that produces spermatozoa." [MP:0001145]
|subset=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=UBERON:0000474
|has_quality=
|has_quality=
|id=UBERON:0000079
|is_a=UBERON:0000990 ;;UBERON:0014403
|is_obsolete=
|located_in=
|located_in=
|part_of=
|name=male reproductive system
|namespace=FANTOM
|obo_creation_date=
|part_of=UBERON:0003101
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym="genitalia of male organism" EXACT [OBOL:automatic];;"male genital organ" RELATED [BTO:0000082];;"male genital system" EXACT [FMA:45664];;"male genitalia" EXACT [];;"male genitals" EXACT [];;"male organism genitalia" EXACT [OBOL:automatic];;"male organism reproductive system" EXACT [OBOL:automatic];;"male reproductive tract" RELATED [MA:0000396];;"reproductive system of male organism" EXACT [OBOL:automatic];;"systema genitale masculinum" RELATED [BTO:0000082]
|union_of=
|xref=BTO:0000082;;EFO:0000970;;EHDAA2:0001054;;EHDAA:8136;;EMAPA:17968;;EV:0100101;;FBbt:00004927;;FMA:45664;;GAID:386;;HAO:0000505;;MA:0000396;;MESH:A.05.360.444;;ncithesaurus:Male_Genitalia;;ncithesaurus:Male_Reproductive_System;;OpenCyc:Mx4rvViCepwpEbGdrcN5Y29ycA;;SCTID:361340001;;TGMA:0000634;;VHOG:0000725;;WBbt:0008423;;XAO:0000155
}}
}}

Latest revision as of 17:06, 12 September 2014

Name:male reproductive system
Namespace:FANTOM
Definition:"the organs associated with producing offspring in the gender that produces spermatozoa." [MP:0001145]
Xrefs:
links:

BTO:0000082
EFO:0000970
EHDAA2:0001054
EHDAA:8136
EMAPA:17968
EV:0100101
FBbt:00004927
FMA:45664
GAID:386
HAO:0000505
MA:0000396
MESH:A.05.360.444
ncithesaurus:Male_Genitalia
ncithesaurus:Male_Reproductive_System
OpenCyc:Mx4rvViCepwpEbGdrcN5Y29ycA
SCTID:361340001
TGMA:0000634
VHOG:0000725
WBbt:0008423

XAO:0000155
Synonyms: "genitalia of male organism" EXACT [OBOL:automatic]
"male genital organ" RELATED [BTO:0000082]
"male genital system" EXACT [FMA:45664]
"male genitalia" EXACT []
"male genitals" EXACT []
"male organism genitalia" EXACT [OBOL:automatic]
"male organism reproductive system" EXACT [OBOL:automatic]
"male reproductive tract" RELATED [MA:0000396]
"reproductive system of male organism" EXACT [OBOL:automatic]
"systema genitale masculinum" RELATED [BTO:0000082]

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0000990(reproductive system),UBERON:0014403(male anatomical structure)
disjoint_from:UBERON:0000474(female reproductive system)
part_of:UBERON:0003101(male organism)



Children

part of:UBERON:0000473 (testis),UBERON:0003135 (male reproductive organ),UBERON:0004054 (internal male genitalia),UBERON:0005399 (male reproductive gland),UBERON:0005904 (duct of male reproductive system),UBERON:0008811 (intromittent organ),UBERON:0010147 (male accessory sex gland)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0000079 (male reproductive system), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
1.88e-59FFCP PHASE1:Mm9::chr11:69431224..69431241,-#_56fd02e149853e73957cfd961923ac3ap@chr11:69431224..69431241, -
1.88e-59FFCP PHASE1:Mm9::chr16:37843615..37843636,-#_56fd02e149853e73957cfd961923ac3ap@chr16:37843615..37843636, -
1.88e-59FFCP PHASE1:Mm9::chrX:93160409..93160432,-#_56fd02e149853e73957cfd961923ac3ap@chrX:93160409..93160432, -
1.88e-59FFCP PHASE2:Mm9::chr11:69431224..69431241,-#_56fd02e149853e73957cfd961923ac3ap@chr11:69431224..69431241, -
1.88e-59FFCP PHASE2:Mm9::chr8:26314366..26314395,-#_56fd02e149853e73957cfd961923ac3ap@chr8:26314366..26314395, -
1.88e-59FFCP PHASE2:Mm9::chr16:37843615..37843636,-#_56fd02e149853e73957cfd961923ac3ap@chr16:37843615..37843636, -
1.88e-59FFCP PHASE1:Mm9::chr8:26314366..26314395,-#_56fd02e149853e73957cfd961923ac3ap@chr8:26314366..26314395, -
1.88e-59FFCP PHASE2:Mm9::chrX:93160409..93160432,-#_56fd02e149853e73957cfd961923ac3ap@chrX:93160409..93160432, -
6.54e-57FFCP PHASE1:Mm9::chr2:152430094..152430135,+#_3f11696cf7487bafe60237160fb059dbp1@Defb36
6.54e-57FFCP PHASE2:Mm9::chr2:152430094..152430135,+#_3f11696cf7487bafe60237160fb059dbp1@Defb36
1.11e-54FFCP PHASE2:Mm9::chr2:148660852..148660861,+#_1bc1587d42b396bf2c7754c951884f39p3@Cst9
1.11e-54FFCP PHASE1:Mm9::chr8:26314291..26314315,-#_1bc1587d42b396bf2c7754c951884f39p@chr8:26314291..26314315, -
1.11e-54FFCP PHASE1:Mm9::chr19:25580226..25580261,+#_1bc1587d42b396bf2c7754c951884f39p2@Dmrt1
1.11e-54FFCP PHASE2:Mm9::chr8:26314291..26314315,-#_1bc1587d42b396bf2c7754c951884f39p@chr8:26314291..26314315, -
1.11e-54FFCP PHASE1:Mm9::chr2:148660852..148660861,+#_1bc1587d42b396bf2c7754c951884f39p3@Cst9
1.11e-54FFCP PHASE2:Mm9::chr19:25580226..25580261,+#_1bc1587d42b396bf2c7754c951884f39p2@Dmrt1
4.22e-54FFCP PHASE2:Mm9::chr11:69431571..69431587,-#_54832d19ef99cc16b90286739ebca445p3@Shbg
4.22e-54FFCP PHASE2:Mm9::chr11:69431091..69431096,-#_54832d19ef99cc16b90286739ebca445p@chr11:69431091..69431096, -
4.22e-54FFCP PHASE2:Mm9::chr19:25580353..25580364,+#_54832d19ef99cc16b90286739ebca445p4@Dmrt1
4.22e-54FFCP PHASE1:Mm9::chr19:25580353..25580364,+#_54832d19ef99cc16b90286739ebca445p4@Dmrt1
4.22e-54FFCP PHASE1:Mm9::chr2:31332380..31332388,+#_54832d19ef99cc16b90286739ebca445p@chr2:31332380..31332388, +
4.22e-54FFCP PHASE1:Mm9::chr11:69431571..69431587,-#_54832d19ef99cc16b90286739ebca445p3@Shbg
4.22e-54FFCP PHASE1:Mm9::chr11:69431091..69431096,-#_54832d19ef99cc16b90286739ebca445p@chr11:69431091..69431096, -
4.22e-54FFCP PHASE2:Mm9::chr2:31332380..31332388,+#_54832d19ef99cc16b90286739ebca445p@chr2:31332380..31332388, +
4.22e-54FFCP PHASE2:Mm9::chr10:127031444..127031494,-#_54832d19ef99cc16b90286739ebca445p@chr10:127031444..127031494, -
4.22e-54FFCP PHASE1:Mm9::chr6:83138985..83138996,+#_54832d19ef99cc16b90286739ebca445p10@Dctn1
4.22e-54FFCP PHASE2:Mm9::chr6:83138985..83138996,+#_54832d19ef99cc16b90286739ebca445p10@Dctn1
4.22e-54FFCP PHASE1:Mm9::chr10:127031444..127031494,-#_54832d19ef99cc16b90286739ebca445p@chr10:127031444..127031494, -
6.24e-54FFCP PHASE2:Hg19::chr1:44584485..44584512,+#_2cd7e4bd31318c5b515c598d38ad3d3cp2@KLF17
6.24e-54FFCP PHASE1:Hg19::chr1:44584485..44584512,+#_2cd7e4bd31318c5b515c598d38ad3d3cp2@KLF17
2.5e-53FFCP PHASE2:Mm9::chr6:145564529..145564546,+#_9584e974056e9ce5f0d739425b7103d9p1@Tuba3b
2.5e-53FFCP PHASE1:Mm9::chr6:145564529..145564546,+#_9584e974056e9ce5f0d739425b7103d9p1@Tuba3b
2.76e-53FFCP PHASE1:Mm9::chr6:125236033..125236068,-#_113014160776094d5623f205db7a8a01p1@Tuba3a, p2@Tuba3b
2.76e-53FFCP PHASE2:Mm9::chr6:125236033..125236068,-#_113014160776094d5623f205db7a8a01p1@Tuba3a, p2@Tuba3b
1.21e-50FFCP PHASE2:Mm9::chr7:20074432..20074443,+#_51cecf70996e62240a028868490fef8bp2@Exoc3l2
1.21e-50FFCP PHASE1:Mm9::chr13:64190487..64190500,-#_51cecf70996e62240a028868490fef8bp3@Hsd17b3
1.21e-50FFCP PHASE2:Mm9::chr6:83139055..83139074,+#_51cecf70996e62240a028868490fef8bp7@Dctn1
1.21e-50FFCP PHASE2:Mm9::chr13:64190487..64190500,-#_51cecf70996e62240a028868490fef8bp3@Hsd17b3
1.21e-50FFCP PHASE1:Mm9::chr7:20074432..20074443,+#_51cecf70996e62240a028868490fef8bp2@Exoc3l2
1.21e-50FFCP PHASE1:Mm9::chr6:83139055..83139074,+#_51cecf70996e62240a028868490fef8bp7@Dctn1
1.35e-50FFCP PHASE2:Mm9::chr19:25580272..25580305,+#_fd71979bdc66d0556578b01a065ddd0ep3@Dmrt1
1.35e-50FFCP PHASE2:Mm9::chrX:50788129..50788149,+#_fd71979bdc66d0556578b01a065ddd0ep2@Etd
1.35e-50FFCP PHASE2:Mm9::chr14:27258741..27258755,-#_fd71979bdc66d0556578b01a065ddd0ep12@Slmap
1.35e-50FFCP PHASE1:Mm9::chr14:27258741..27258755,-#_fd71979bdc66d0556578b01a065ddd0ep12@Slmap
1.35e-50FFCP PHASE1:Mm9::chrX:50788129..50788149,+#_fd71979bdc66d0556578b01a065ddd0ep2@Etd
1.35e-50FFCP PHASE1:Mm9::chr19:25580272..25580305,+#_fd71979bdc66d0556578b01a065ddd0ep3@Dmrt1
1.68e-50FFCP PHASE1:Mm9::chr8:26314330..26314348,-#_27fdbcc1b6eb05559b27c2794c4cde3fp@chr8:26314330..26314348, -
1.68e-50FFCP PHASE2:Mm9::chr8:26314330..26314348,-#_27fdbcc1b6eb05559b27c2794c4cde3fp@chr8:26314330..26314348, -
1.87e-50FFCP PHASE1:Mm9::chr12:77084655..77084667,+#_245010c5c4f9068f29214e030a0adc43p@chr12:77084655..77084667, +
1.87e-50FFCP PHASE2:Mm9::chr12:77084655..77084667,+#_245010c5c4f9068f29214e030a0adc43p@chr12:77084655..77084667, +
2.09e-50FFCP PHASE1:Mm9::chrX:50788166..50788192,+#_1fca440d764c9c9084ad51cde82504c9p1@Etd
2.09e-50FFCP PHASE2:Mm9::chrX:50788166..50788192,+#_1fca440d764c9c9084ad51cde82504c9p1@Etd
3.4e-50FFCP PHASE1:Mm9::chr1:168168856..168168893,-#_46474946bcc2cf3f05564ce569109723p1@Mael
3.4e-50FFCP PHASE2:Mm9::chr1:168168856..168168893,-#_46474946bcc2cf3f05564ce569109723p1@Mael
2.72e-49FFCP PHASE2:Mm9::chr15:81602763..81602776,+#_2ac3daad3358229ce797ea60f4254f5fp@chr15:81602763..81602776, +
2.72e-49FFCP PHASE1:Mm9::chr15:81602763..81602776,+#_2ac3daad3358229ce797ea60f4254f5fp@chr15:81602763..81602776, +
3.05e-49FFCP PHASE2:Mm9::chr2:152430060..152430086,+#_f7312e4108df2388242685f771dc1a48p3@Defb36
3.05e-49FFCP PHASE1:Mm9::chr2:152430060..152430086,+#_f7312e4108df2388242685f771dc1a48p3@Defb36
3.05e-49FFCP PHASE1:Mm9::chr1:13216038..13216051,-#_f7312e4108df2388242685f771dc1a48p@chr1:13216038..13216051, -
3.05e-49FFCP PHASE2:Mm9::chr1:13216038..13216051,-#_f7312e4108df2388242685f771dc1a48p@chr1:13216038..13216051, -
4.33e-49FFCP PHASE2:Mm9::chr11:100940503..100940515,+#_45af311be58972282788c93af3986a5ep@chr11:100940503..100940515, +
4.33e-49FFCP PHASE2:Mm9::chrX:49154255..49154260,-#_45af311be58972282788c93af3986a5ep1@Usp26
4.33e-49FFCP PHASE1:Mm9::chrX:49154255..49154260,-#_45af311be58972282788c93af3986a5ep1@Usp26
4.33e-49FFCP PHASE1:Mm9::chr11:100940503..100940515,+#_45af311be58972282788c93af3986a5ep@chr11:100940503..100940515, +
5.47e-49FFCP PHASE2:Mm9::chr18:12758403..12758434,+#_5a0b46e95194b31c97ae25df37cacdd4p5@Ttc39c
5.47e-49FFCP PHASE1:Mm9::chr18:12758403..12758434,+#_5a0b46e95194b31c97ae25df37cacdd4p5@Ttc39c
8.92e-49FFCP PHASE2:Mm9::chr4:140652853..140652865,+#_72b0eaf1b34c706e048f415db939ae22p@chr4:140652853..140652865, +
8.92e-49FFCP PHASE1:Mm9::chr1:135261724..135261733,+#_72b0eaf1b34c706e048f415db939ae22p11@Etnk2
8.92e-49FFCP PHASE1:Mm9::chr3:89763068..89763078,-#_72b0eaf1b34c706e048f415db939ae22p@chr3:89763068..89763078, -
8.92e-49FFCP PHASE2:Mm9::chr1:121420313..121420329,+#_72b0eaf1b34c706e048f415db939ae22p@chr1:121420313..121420329, +
8.92e-49FFCP PHASE1:Mm9::chrX:71422564..71422575,+#_72b0eaf1b34c706e048f415db939ae22p2@Tktl1
8.92e-49FFCP PHASE2:Mm9::chr7:6615049..6615056,-#_72b0eaf1b34c706e048f415db939ae22p1@Zim2
8.92e-49FFCP PHASE1:Mm9::chr7:6615049..6615056,-#_72b0eaf1b34c706e048f415db939ae22p1@Zim2
8.92e-49FFCP PHASE2:Mm9::chrX:71422564..71422575,+#_72b0eaf1b34c706e048f415db939ae22p2@Tktl1
8.92e-49FFCP PHASE2:Mm9::chr1:135261724..135261733,+#_72b0eaf1b34c706e048f415db939ae22p11@Etnk2
8.92e-49FFCP PHASE1:Mm9::chr4:140652853..140652865,+#_72b0eaf1b34c706e048f415db939ae22p@chr4:140652853..140652865, +
8.92e-49FFCP PHASE1:Mm9::chr1:121420313..121420329,+#_72b0eaf1b34c706e048f415db939ae22p@chr1:121420313..121420329, +
8.92e-49FFCP PHASE2:Mm9::chr3:89763068..89763078,-#_72b0eaf1b34c706e048f415db939ae22p@chr3:89763068..89763078, -
9.66e-49FFCP PHASE2:Mm9::chr2:148615085..148615142,+#_2ea038718dbc8a4e1d57ccc7ba9e0075p1@Cst12
9.66e-49FFCP PHASE1:Mm9::chr2:148615085..148615142,+#_2ea038718dbc8a4e1d57ccc7ba9e0075p1@Cst12
3.5e-47FFCP PHASE2:Mm9::chr15:81602721..81602750,+#_dafde993d5484858ee92e7219428ebb3p@chr15:81602721..81602750, +
3.5e-47FFCP PHASE2:Mm9::chr2:148607822..148607844,+#_dafde993d5484858ee92e7219428ebb3p2@8030411F24Rik
3.5e-47FFCP PHASE2:Mm9::chr2:148660933..148660963,+#_dafde993d5484858ee92e7219428ebb3p2@Cst9
3.5e-47FFCP PHASE1:Mm9::chr19:25580110..25580163,+#_dafde993d5484858ee92e7219428ebb3p1@Dmrt1
3.5e-47FFCP PHASE2:Mm9::chr1:135261737..135261767,+#_dafde993d5484858ee92e7219428ebb3p6@Etnk2
3.5e-47FFCP PHASE1:Mm9::chr2:148660933..148660963,+#_dafde993d5484858ee92e7219428ebb3p2@Cst9
3.5e-47FFCP PHASE1:Mm9::chr15:81602721..81602750,+#_dafde993d5484858ee92e7219428ebb3p@chr15:81602721..81602750, +
3.5e-47FFCP PHASE1:Mm9::chr1:135261737..135261767,+#_dafde993d5484858ee92e7219428ebb3p6@Etnk2
3.5e-47FFCP PHASE1:Mm9::chr2:148607822..148607844,+#_dafde993d5484858ee92e7219428ebb3p2@8030411F24Rik
3.5e-47FFCP PHASE2:Mm9::chr19:25580110..25580163,+#_dafde993d5484858ee92e7219428ebb3p1@Dmrt1
3.88e-47FFCP PHASE2:Mm9::chr2:148607786..148607808,+#_05a0e3dd473b024b53b17b388e6f7410p1@8030411F24Rik
3.88e-47FFCP PHASE1:Mm9::chr2:148607786..148607808,+#_05a0e3dd473b024b53b17b388e6f7410p1@8030411F24Rik
4.29e-47FFCP PHASE1:Mm9::chr15:76701495..76701535,-#_3c6083b0072c81fe2d2ad248cf960624p3@Zfp251
4.29e-47FFCP PHASE2:Mm9::chr15:76701495..76701535,-#_3c6083b0072c81fe2d2ad248cf960624p3@Zfp251
5.26e-47FFCP PHASE2:Mm9::chr12:105339370..105339379,+#_89109c9bf24f816cfe39565171906000p2@Serpina5
5.26e-47FFCP PHASE1:Mm9::chr12:105339370..105339379,+#_89109c9bf24f816cfe39565171906000p2@Serpina5
6.44e-47FFCP PHASE2:Mm9::chr1:13216009..13216028,-#_7f27c5145df4c6a65ae3806436862636p@chr1:13216009..13216028, -
6.44e-47FFCP PHASE1:Mm9::chr1:13216009..13216028,-#_7f27c5145df4c6a65ae3806436862636p@chr1:13216009..13216028, -
7.89e-47FFCP PHASE2:Mm9::chr17:49649179..49649202,-#_a956f75ad3165501e9ba2a3d78d9e7f4p@chr17:49649179..49649202, -
7.89e-47FFCP PHASE1:Mm9::chr17:49649179..49649202,-#_a956f75ad3165501e9ba2a3d78d9e7f4p@chr17:49649179..49649202, -

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