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{{DOID
{{DOID
|id=DOID:171
|alt_id=
|name=neuroectodermal tumor
|namespace=disease_ontology
|def=
|xref=MSH:D017599;;NCI:C3716;;SNOMEDCT_2010_1_31:253096008;;SNOMEDCT_2010_1_31:73676002;;UMLS_CUI:C0206093
|is_a=DOID:3095
|synonym="Neuroectodermal tumour" EXACT [SNOMEDCT_2005_07_31:253096008];;"Neuroectodermal tumour" EXACT [SNOMEDCT_2005_07_31:73676002];;"primitive Neuroectodermal neoplasm" EXACT [NCI2004_11_17:C3716]
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def=
|subset=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=DOID:171
|is_a=DOID:3095
|is_obsolete=
|located_in=
|located_in=
|name=neuroectodermal tumor
|namespace=FANTOM
|obo_creation_date=
|part_of=
|part_of=
|preceded_by=
|property_value=IAO:0000412 file:/Users/cjm/Dropbox/fantom5/HumanDO.obo
|property_value=IAO:0000412 file:/Users/cjm/Dropbox/fantom5/HumanDO.obo
|is_obsolete=
|subset=
|preceded_by=
|synonym="Neuroectodermal tumour" EXACT [SNOMEDCT_2005_07_31:253096008];;"Neuroectodermal tumour" EXACT [SNOMEDCT_2005_07_31:73676002];;"primitive Neuroectodermal neoplasm" EXACT [NCI2004_11_17:C3716]
|union_of=
|xref=MSH:D017599;;NCI:C3716;;SNOMEDCT_2010_1_31:253096008;;SNOMEDCT_2010_1_31:73676002;;UMLS_CUI:C0206093
}}
}}

Latest revision as of 16:49, 12 September 2014

Name:neuroectodermal tumor
Namespace:FANTOM
Xrefs:
links:

MSH:D017599
NCI:C3716
SNOMEDCT_2010_1_31:253096008
SNOMEDCT_2010_1_31:73676002

UMLS_CUI:C0206093
Synonyms: "Neuroectodermal tumour" EXACT [SNOMEDCT_2005_07_31:253096008]
"Neuroectodermal tumour" EXACT [SNOMEDCT_2005_07_31:73676002]
"primitive Neuroectodermal neoplasm" EXACT [NCI2004_11_17:C3716]

Ontology association<br>Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:DOID:3095(germ cell and embryonal cancer)



Children


is a:FF:10637-108I7 (neuroectodermal tumor cell line:FU-RPNT-1),FF:10663-109C6 (neuroectodermal tumor cell line:FU-RPNT-2),FF:10697-109G4 (peripheral neuroectodermal tumor cell line:KU-SN),FF:10774-110F9 (neuroectodermal tumor cell line:TASK1),DOID:169 (neuroendocrine tumor)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples

Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results

Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:171 (neuroectodermal tumor), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
2.05e-156FFCP PHASE2:Hg19::chr2:218875465..218875482,-#_5900da959f1bf09a7b5ac40467223f54p@chr2:218875465..218875482, -
2.05e-156FFCP PHASE1:Hg19::chr2:218875465..218875482,-#_5900da959f1bf09a7b5ac40467223f54p@chr2:218875465..218875482, -
3.56e-120FFCP PHASE1:Hg19::chr2:218875447..218875463,-#_d1266b32993bac906a7dbe641da18af8p@chr2:218875447..218875463, -
3.56e-120FFCP PHASE2:Hg19::chr2:218875447..218875463,-#_d1266b32993bac906a7dbe641da18af8p@chr2:218875447..218875463, -
1.29e-117FFCP PHASE2:Hg19::chr13:31590717..31590730,-#_0b6a654a655c1e7282b4cd05f448b1fcp@chr13:31590717..31590730, -
1.29e-117FFCP PHASE2:Hg19::chr8:12808720..12808732,+#_0b6a654a655c1e7282b4cd05f448b1fcp19@KIAA1456
1.29e-117FFCP PHASE1:Hg19::chr13:31590717..31590730,-#_0b6a654a655c1e7282b4cd05f448b1fcp@chr13:31590717..31590730, -
1.29e-117FFCP PHASE1:Hg19::chr8:12808720..12808732,+#_0b6a654a655c1e7282b4cd05f448b1fcp19@KIAA1456
6.02e-101FFCP PHASE2:Hg19::chrX:51361761..51361770,-#_21bbb193c2d492fe50b638fe5ef1d049p2@ENST00000417339
6.02e-101FFCP PHASE1:Hg19::chr3:5932149..5932178,+#_21bbb193c2d492fe50b638fe5ef1d049p@chr3:5932149..5932178, +
6.02e-101FFCP PHASE2:Hg19::chr3:5932149..5932178,+#_21bbb193c2d492fe50b638fe5ef1d049p@chr3:5932149..5932178, +
6.02e-101FFCP PHASE1:Hg19::chrX:51361761..51361770,-#_21bbb193c2d492fe50b638fe5ef1d049p2@ENST00000417339
7.16e-101FFCP PHASE1:Hg19::chr20:4228201..4228214,+#_f312bafc6f67f49aaa35a3be9b9fcc6bp@chr20:4228201..4228214, +
7.16e-101FFCP PHASE2:Hg19::chr20:4228201..4228214,+#_f312bafc6f67f49aaa35a3be9b9fcc6bp@chr20:4228201..4228214, +
8.51e-101FFCP PHASE1:Hg19::chr20:4228155..4228166,+#_8389776b62a82dbe4201bf374cdedc10p@chr20:4228155..4228166, +
8.51e-101FFCP PHASE2:Hg19::chr20:4228155..4228166,+#_8389776b62a82dbe4201bf374cdedc10p@chr20:4228155..4228166, +
8.51e-101FFCP PHASE1:Hg19::chr9:15883095..15883109,+#_8389776b62a82dbe4201bf374cdedc10p@chr9:15883095..15883109, +
8.51e-101FFCP PHASE2:Hg19::chr9:15883095..15883109,+#_8389776b62a82dbe4201bf374cdedc10p@chr9:15883095..15883109, +
1.01e-100FFCP PHASE1:Hg19::chr9:15883050..15883085,+#_7da1c0852f16d9af9a554c4df8571801p@chr9:15883050..15883085, +
1.01e-100FFCP PHASE2:Hg19::chr9:15883050..15883085,+#_7da1c0852f16d9af9a554c4df8571801p@chr9:15883050..15883085, +
2.85e-98FFCP PHASE1:Hg19::chr3:8407443..8407453,-#_011e7ecb0202ce937db12a53a10e6677p@chr3:8407443..8407453, -
2.85e-98FFCP PHASE1:Hg19::chr2:218876066..218876078,-#_011e7ecb0202ce937db12a53a10e6677p@chr2:218876066..218876078, -
2.85e-98FFCP PHASE1:Hg19::chr19:50016671..50016675,+#_011e7ecb0202ce937db12a53a10e6677p22@FCGRT
2.85e-98FFCP PHASE2:Hg19::chr3:8407443..8407453,-#_011e7ecb0202ce937db12a53a10e6677p@chr3:8407443..8407453, -
2.85e-98FFCP PHASE2:Hg19::chr2:218876066..218876078,-#_011e7ecb0202ce937db12a53a10e6677p@chr2:218876066..218876078, -
2.85e-98FFCP PHASE2:Hg19::chr19:50016671..50016675,+#_011e7ecb0202ce937db12a53a10e6677p22@FCGRT
2.85e-98FFCP PHASE2:Hg19::chr17:31618260..31618271,+#_011e7ecb0202ce937db12a53a10e6677p@chr17:31618260..31618271, +
2.85e-98FFCP PHASE1:Hg19::chr17:31618260..31618271,+#_011e7ecb0202ce937db12a53a10e6677p@chr17:31618260..31618271, +
1.43e-88FFCP PHASE1:Hg19::chr8:12808701..12808712,+#_7281323f9b8d842f0254d7bfcaa16f91p16@KIAA1456
1.43e-88FFCP PHASE1:Hg19::chr1:60314016..60314043,+#_7281323f9b8d842f0254d7bfcaa16f91p@chr1:60314016..60314043, +
1.43e-88FFCP PHASE2:Hg19::chr8:12808701..12808712,+#_7281323f9b8d842f0254d7bfcaa16f91p16@KIAA1456
1.43e-88FFCP PHASE2:Hg19::chr1:60314016..60314043,+#_7281323f9b8d842f0254d7bfcaa16f91p@chr1:60314016..60314043, +
3.6e-82FFCP PHASE1:Hg19::chrX:19141065..19141080,-#_6fac426f4fd9c0d9ee7c27be355e22ffp3@GPR64
3.6e-82FFCP PHASE2:Hg19::chrX:19141065..19141080,-#_6fac426f4fd9c0d9ee7c27be355e22ffp3@GPR64
4.26e-82FFCP PHASE2:Hg19::chr8:27046735..27046767,-#_7a2747f63ac508ab3536eecd92ef724dp@chr8:27046735..27046767, -
4.26e-82FFCP PHASE2:Hg19::chr19:49714057..49714062,+#_7a2747f63ac508ab3536eecd92ef724dp@chr19:49714057..49714062, +
4.26e-82FFCP PHASE2:Hg19::chr6:123318989..123318999,+#_7a2747f63ac508ab3536eecd92ef724dp@chr6:123318989..123318999, +
4.26e-82FFCP PHASE1:Hg19::chr8:27046735..27046767,-#_7a2747f63ac508ab3536eecd92ef724dp@chr8:27046735..27046767, -
4.26e-82FFCP PHASE1:Hg19::chr19:49714057..49714062,+#_7a2747f63ac508ab3536eecd92ef724dp@chr19:49714057..49714062, +
4.26e-82FFCP PHASE1:Hg19::chr6:123318989..123318999,+#_7a2747f63ac508ab3536eecd92ef724dp@chr6:123318989..123318999, +
5.95e-82FFCP PHASE2:Hg19::chr9:15883133..15883144,+#_a7ab904fd192d8507244999c37a8c8aap@chr9:15883133..15883144, +
5.95e-82FFCP PHASE1:Hg19::chr9:15883133..15883144,+#_a7ab904fd192d8507244999c37a8c8aap@chr9:15883133..15883144, +
7.04e-82FFCP PHASE1:Hg19::chr4:8068231..8068247,+#_52445a04ec739dce78ebb73cdc9eb1a0p1@ENST00000510640
7.04e-82FFCP PHASE2:Hg19::chr4:8068231..8068247,+#_52445a04ec739dce78ebb73cdc9eb1a0p1@ENST00000510640
2.14e-80FFCP PHASE2:Hg19::chr8:70744711..70744752,-#_d95e53f645167d51191ed8c55706af8fp6@SLCO5A1
2.14e-80FFCP PHASE1:Hg19::chr8:70744711..70744752,-#_d95e53f645167d51191ed8c55706af8fp6@SLCO5A1
4.88e-80FFCP PHASE2:Hg19::chr6:123318862..123318892,+#_f661ed036d0c707c6d897c3ebffe7060p@chr6:123318862..123318892, +
4.88e-80FFCP PHASE1:Hg19::chr6:123318862..123318892,+#_f661ed036d0c707c6d897c3ebffe7060p@chr6:123318862..123318892, +
5.79e-79FFCP PHASE2:Hg19::chr10:71696103..71696151,-#_52d11a0f85c8f639c7154baf80094f55p@chr10:71696103..71696151, -
5.79e-79FFCP PHASE1:Hg19::chr16:8626925..8626935,+#_52d11a0f85c8f639c7154baf80094f55p@chr16:8626925..8626935, +
5.79e-79FFCP PHASE1:Hg19::chr10:29717478..29717509,-#_52d11a0f85c8f639c7154baf80094f55p@chr10:29717478..29717509, -
5.79e-79FFCP PHASE1:Hg19::chr7:123674206..123674214,-#_52d11a0f85c8f639c7154baf80094f55p@chr7:123674206..123674214, -
5.79e-79FFCP PHASE2:Hg19::chr8:27046803..27046810,-#_52d11a0f85c8f639c7154baf80094f55p@chr8:27046803..27046810, -
5.79e-79FFCP PHASE1:Hg19::chr10:71696103..71696151,-#_52d11a0f85c8f639c7154baf80094f55p@chr10:71696103..71696151, -
5.79e-79FFCP PHASE1:Hg19::chr9:15883093..15883094,+#_52d11a0f85c8f639c7154baf80094f55p@chr9:15883093..15883094, +
5.79e-79FFCP PHASE2:Hg19::chr16:8627043..8627056,+#_52d11a0f85c8f639c7154baf80094f55p@chr16:8627043..8627056, +
5.79e-79FFCP PHASE2:Hg19::chr7:123674206..123674214,-#_52d11a0f85c8f639c7154baf80094f55p@chr7:123674206..123674214, -
5.79e-79FFCP PHASE2:Hg19::chr10:71812102..71812136,+#_52d11a0f85c8f639c7154baf80094f55p3@H2AFY2
5.79e-79FFCP PHASE1:Hg19::chr2:228754609..228754626,+#_52d11a0f85c8f639c7154baf80094f55p@chr2:228754609..228754626, +
5.79e-79FFCP PHASE1:Hg19::chr8:27041862..27041872,+#_52d11a0f85c8f639c7154baf80094f55p1@ENST00000521408
5.79e-79FFCP PHASE1:Hg19::chr13:100951268..100951280,+#_52d11a0f85c8f639c7154baf80094f55p@chr13:100951268..100951280, +
5.79e-79FFCP PHASE2:Hg19::chr16:8627066..8627076,+#_52d11a0f85c8f639c7154baf80094f55p@chr16:8627066..8627076, +
5.79e-79FFCP PHASE1:Hg19::chr1:236888019..236888038,+#_52d11a0f85c8f639c7154baf80094f55p@chr1:236888019..236888038, +
5.79e-79FFCP PHASE1:Hg19::chr16:8627043..8627056,+#_52d11a0f85c8f639c7154baf80094f55p@chr16:8627043..8627056, +
5.79e-79FFCP PHASE2:Hg19::chr9:15883093..15883094,+#_52d11a0f85c8f639c7154baf80094f55p@chr9:15883093..15883094, +
5.79e-79FFCP PHASE1:Hg19::chr10:71812102..71812136,+#_52d11a0f85c8f639c7154baf80094f55p3@H2AFY2
5.79e-79FFCP PHASE2:Hg19::chr16:8626925..8626935,+#_52d11a0f85c8f639c7154baf80094f55p@chr16:8626925..8626935, +
5.79e-79FFCP PHASE2:Hg19::chr10:29717478..29717509,-#_52d11a0f85c8f639c7154baf80094f55p@chr10:29717478..29717509, -
5.79e-79FFCP PHASE2:Hg19::chr8:27041862..27041872,+#_52d11a0f85c8f639c7154baf80094f55p1@ENST00000521408
5.79e-79FFCP PHASE2:Hg19::chr2:228754609..228754626,+#_52d11a0f85c8f639c7154baf80094f55p@chr2:228754609..228754626, +
5.79e-79FFCP PHASE2:Hg19::chr13:100951268..100951280,+#_52d11a0f85c8f639c7154baf80094f55p@chr13:100951268..100951280, +
5.79e-79FFCP PHASE1:Hg19::chr16:8627066..8627076,+#_52d11a0f85c8f639c7154baf80094f55p@chr16:8627066..8627076, +
5.79e-79FFCP PHASE2:Hg19::chr1:236888019..236888038,+#_52d11a0f85c8f639c7154baf80094f55p@chr1:236888019..236888038, +
5.79e-79FFCP PHASE1:Hg19::chr8:27046803..27046810,-#_52d11a0f85c8f639c7154baf80094f55p@chr8:27046803..27046810, -
3.9e-71FFCP PHASE1:Hg19::chr9:90112117..90112164,+#_c9914cdb4f46faa15108d59cdbd28d86p19@DAPK1
3.9e-71FFCP PHASE2:Hg19::chr9:90112117..90112164,+#_c9914cdb4f46faa15108d59cdbd28d86p19@DAPK1
3.9e-71FFCP PHASE1:Hg19::chr19:49714044..49714055,+#_c9914cdb4f46faa15108d59cdbd28d86p@chr19:49714044..49714055, +
3.9e-71FFCP PHASE2:Hg19::chr19:49714044..49714055,+#_c9914cdb4f46faa15108d59cdbd28d86p@chr19:49714044..49714055, +
1.54e-70FFCP PHASE1:Hg19::chr20:4228171..4228192,+#_b62c5802c8d31b601e686ebd3fc3fac3p@chr20:4228171..4228192, +
1.54e-70FFCP PHASE2:Hg19::chr11:16629597..16629610,-#_b62c5802c8d31b601e686ebd3fc3fac3p25@SOX6
1.54e-70FFCP PHASE1:Hg19::chr11:16629597..16629610,-#_b62c5802c8d31b601e686ebd3fc3fac3p25@SOX6
1.54e-70FFCP PHASE2:Hg19::chr20:4228171..4228192,+#_b62c5802c8d31b601e686ebd3fc3fac3p@chr20:4228171..4228192, +
2.05e-70FFCP PHASE1:Hg19::chr20:4228567..4228605,-#_f47e810be9bfb068e4c8496f861c6e7ap@chr20:4228567..4228605, -
2.05e-70FFCP PHASE2:Hg19::chr20:4228567..4228605,-#_f47e810be9bfb068e4c8496f861c6e7ap@chr20:4228567..4228605, -
2.74e-70FFCP PHASE1:Hg19::chr19:50021351..50021354,+#_0531ce7bbad97ebf66e89924eea528bap@chr19:50021351..50021354, +
2.74e-70FFCP PHASE2:Hg19::chr19:50021351..50021354,+#_0531ce7bbad97ebf66e89924eea528bap@chr19:50021351..50021354, +
1.84e-63FFCP PHASE1:Hg19::chr6:98716530..98716546,-#_3877640e7b29c4f0a4293dd42765531ep@chr6:98716530..98716546, -
1.84e-63FFCP PHASE1:Hg19::chr3:197839227..197839233,+#_3877640e7b29c4f0a4293dd42765531ep@chr3:197839227..197839233, +
1.84e-63FFCP PHASE1:Hg19::chr10:71695706..71695736,-#_3877640e7b29c4f0a4293dd42765531ep@chr10:71695706..71695736, -
1.84e-63FFCP PHASE2:Hg19::chr8:27050096..27050107,+#_3877640e7b29c4f0a4293dd42765531ep@chr8:27050096..27050107, +
1.84e-63FFCP PHASE2:Hg19::chr16:8626961..8626972,+#_3877640e7b29c4f0a4293dd42765531ep@chr16:8626961..8626972, +
1.84e-63FFCP PHASE2:Hg19::chr11:83436107..83436115,-#_3877640e7b29c4f0a4293dd42765531ep46@DLG2
1.84e-63FFCP PHASE2:Hg19::chr6:98716530..98716546,-#_3877640e7b29c4f0a4293dd42765531ep@chr6:98716530..98716546, -
1.84e-63FFCP PHASE2:Hg19::chr19:15580961..15580969,-#_3877640e7b29c4f0a4293dd42765531ep@chr19:15580961..15580969, -
1.84e-63FFCP PHASE1:Hg19::chr1:209797057..209797070,-#_3877640e7b29c4f0a4293dd42765531ep5@MIR4260
1.84e-63FFCP PHASE2:Hg19::chr3:197839227..197839233,+#_3877640e7b29c4f0a4293dd42765531ep@chr3:197839227..197839233, +
1.84e-63FFCP PHASE1:Hg19::chr16:8626961..8626972,+#_3877640e7b29c4f0a4293dd42765531ep@chr16:8626961..8626972, +
1.84e-63FFCP PHASE2:Hg19::chr1:209797057..209797070,-#_3877640e7b29c4f0a4293dd42765531ep5@MIR4260
1.84e-63FFCP PHASE1:Hg19::chr11:83436107..83436115,-#_3877640e7b29c4f0a4293dd42765531ep46@DLG2
1.84e-63FFCP PHASE2:Hg19::chr10:71695706..71695736,-#_3877640e7b29c4f0a4293dd42765531ep@chr10:71695706..71695736, -

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