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{{DOID
{{DOID
|id=DOID:1325
|alt_id=
|name=bronchus cancer
|namespace=disease_ontology
|def=
|xref=ICD9CM:162.9;;SNOMEDCT_2010_1_31:187875007;;SNOMEDCT_2010_1_31:190092003;;SNOMEDCT_2010_1_31:269465004;;UMLS_CUI:C0348343
|is_a=DOID:1324
|synonym="malignant neoplasm of bronchus and lung, unspecified" EXACT [ICD9CM_2006:162.9];;"malignant neoplasm of bronchus or lung NOS (disorder)" EXACT [SNOMEDCT_2005_07_31:269465004];;"malignant neoplasm of bronchus or lung, unspecified (disorder)" EXACT [SNOMEDCT_2005_07_31:190092003]
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def=
|subset=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=DOID:1325
|is_a=DOID:1324
|is_obsolete=
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|located_in=
|name=bronchus cancer
|namespace=FANTOM
|obo_creation_date=
|part_of=
|part_of=
|preceded_by=
|property_value=IAO:0000412 file:/Users/cjm/Dropbox/fantom5/HumanDO.obo
|property_value=IAO:0000412 file:/Users/cjm/Dropbox/fantom5/HumanDO.obo
|is_obsolete=
|subset=
|preceded_by=
|synonym="malignant neoplasm of bronchus and lung, unspecified" EXACT [ICD9CM_2006:162.9];;"malignant neoplasm of bronchus or lung NOS (disorder)" EXACT [SNOMEDCT_2005_07_31:269465004];;"malignant neoplasm of bronchus or lung, unspecified (disorder)" EXACT [SNOMEDCT_2005_07_31:190092003]
|union_of=
|xref=ICD9CM:162.9;;SNOMEDCT_2010_1_31:187875007;;SNOMEDCT_2010_1_31:190092003;;SNOMEDCT_2010_1_31:269465004;;UMLS_CUI:C0348343
}}
}}

Latest revision as of 16:48, 12 September 2014

Name:bronchus cancer
Namespace:FANTOM
Xrefs:
links:

ICD9CM:162.9
SNOMEDCT_2010_1_31:187875007
SNOMEDCT_2010_1_31:190092003
SNOMEDCT_2010_1_31:269465004

UMLS_CUI:C0348343
Synonyms: "malignant neoplasm of bronchus and lung, unspecified" EXACT [ICD9CM_2006:162.9]
"malignant neoplasm of bronchus or lung NOS (disorder)" EXACT [SNOMEDCT_2005_07_31:269465004]
"malignant neoplasm of bronchus or lung, unspecified (disorder)" EXACT [SNOMEDCT_2005_07_31:190092003]

Ontology association<br>Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:DOID:1324(lung cancer)



Children


is a:DOID:3904 (bronchogenic carcinoma)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples

Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results

Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:1325 (bronchus cancer), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
4.76e-57FFCP PHASE2:Hg19::chr6:125378873..125378876,+#_ce48738c62d3333ff2f6d2b34f669c50p@chr6:125378873..125378876, +
4.76e-57FFCP PHASE1:Hg19::chr6:45405332..45405343,+#_ce48738c62d3333ff2f6d2b34f669c50p@chr6:45405332..45405343, +
4.76e-57FFCP PHASE1:Hg19::chr6:45399245..45399258,+#_ce48738c62d3333ff2f6d2b34f669c50p@chr6:45399245..45399258, +
4.76e-57FFCP PHASE1:Hg19::chr6:45399533..45399540,+#_ce48738c62d3333ff2f6d2b34f669c50p@chr6:45399533..45399540, +
4.76e-57FFCP PHASE1:Hg19::chr6:45405393..45405412,+#_ce48738c62d3333ff2f6d2b34f669c50p@chr6:45405393..45405412, +
4.76e-57FFCP PHASE2:Hg19::chr6:45399294..45399301,+#_ce48738c62d3333ff2f6d2b34f669c50p@chr6:45399294..45399301, +
4.76e-57FFCP PHASE1:Hg19::chr6:45399263..45399274,+#_ce48738c62d3333ff2f6d2b34f669c50p@chr6:45399263..45399274, +
4.76e-57FFCP PHASE1:Hg19::chr6:125378873..125378876,+#_ce48738c62d3333ff2f6d2b34f669c50p@chr6:125378873..125378876, +
4.76e-57FFCP PHASE2:Hg19::chr6:45405332..45405343,+#_ce48738c62d3333ff2f6d2b34f669c50p@chr6:45405332..45405343, +
4.76e-57FFCP PHASE2:Hg19::chr6:45399245..45399258,+#_ce48738c62d3333ff2f6d2b34f669c50p@chr6:45399245..45399258, +
4.76e-57FFCP PHASE2:Hg19::chr6:45399533..45399540,+#_ce48738c62d3333ff2f6d2b34f669c50p@chr6:45399533..45399540, +
4.76e-57FFCP PHASE1:Hg19::chr6:45399294..45399301,+#_ce48738c62d3333ff2f6d2b34f669c50p@chr6:45399294..45399301, +
4.76e-57FFCP PHASE2:Hg19::chr6:45405393..45405412,+#_ce48738c62d3333ff2f6d2b34f669c50p@chr6:45405393..45405412, +
4.76e-57FFCP PHASE2:Hg19::chr6:45399263..45399274,+#_ce48738c62d3333ff2f6d2b34f669c50p@chr6:45399263..45399274, +
1.49e-38FFCP PHASE1:Hg19::chr6:45399422..45399430,+#_b5aa4a1e098d01cde551406e1db2f153p@chr6:45399422..45399430, +
1.49e-38FFCP PHASE1:Hg19::chr6:73786620..73786627,+#_b5aa4a1e098d01cde551406e1db2f153p@chr6:73786620..73786627, +
1.49e-38FFCP PHASE2:Hg19::chr8:40525350..40525354,-#_b5aa4a1e098d01cde551406e1db2f153p@chr8:40525350..40525354, -
1.49e-38FFCP PHASE2:Hg19::chr6:45399724..45399733,+#_b5aa4a1e098d01cde551406e1db2f153p@chr6:45399724..45399733, +
1.49e-38FFCP PHASE2:Hg19::chr6:73786593..73786601,+#_b5aa4a1e098d01cde551406e1db2f153p@chr6:73786593..73786601, +
1.49e-38FFCP PHASE2:Hg19::chr6:45399422..45399430,+#_b5aa4a1e098d01cde551406e1db2f153p@chr6:45399422..45399430, +
1.49e-38FFCP PHASE1:Hg19::chr8:40525350..40525354,-#_b5aa4a1e098d01cde551406e1db2f153p@chr8:40525350..40525354, -
1.49e-38FFCP PHASE2:Hg19::chr6:73786620..73786627,+#_b5aa4a1e098d01cde551406e1db2f153p@chr6:73786620..73786627, +
1.49e-38FFCP PHASE1:Hg19::chr6:45399724..45399733,+#_b5aa4a1e098d01cde551406e1db2f153p@chr6:45399724..45399733, +
1.49e-38FFCP PHASE1:Hg19::chr6:73786593..73786601,+#_b5aa4a1e098d01cde551406e1db2f153p@chr6:73786593..73786601, +
1.8e-38FFCP PHASE2:Hg19::chr18:10085554..10085562,+#_56a3faba1a472007fb8d88e1c18523d7p@chr18:10085554..10085562, +
1.8e-38FFCP PHASE1:Hg19::chr18:10085554..10085562,+#_56a3faba1a472007fb8d88e1c18523d7p@chr18:10085554..10085562, +
2.18e-38FFCP PHASE2:Hg19::chr2:233352641..233352675,+#_77e220dbff3f2a7369f3b5ad85083a57p@chr2:233352641..233352675, +
2.18e-38FFCP PHASE1:Hg19::chr2:233352641..233352675,+#_77e220dbff3f2a7369f3b5ad85083a57p@chr2:233352641..233352675, +
1.14e-32FFCP PHASE2:Hg19::chr14:106916169..106916203,+#_5e7202742a66b7b462faf1dac721969ep@chr14:106916169..106916203, +
1.14e-32FFCP PHASE1:Hg19::chr14:106916169..106916203,+#_5e7202742a66b7b462faf1dac721969ep@chr14:106916169..106916203, +
1.78e-29FFCP PHASE1:Hg19::chr4:169849979..169849990,-#_1b95cd093abad85ff1daec551ffc50b7p@chr4:169849979..169849990, -
1.78e-29FFCP PHASE2:Hg19::chr5:79097476..79097484,+#_1b95cd093abad85ff1daec551ffc50b7p@chr5:79097476..79097484, +
1.78e-29FFCP PHASE2:Hg19::chr3:150914241..150914244,+#_1b95cd093abad85ff1daec551ffc50b7p@chr3:150914241..150914244, +
1.78e-29FFCP PHASE2:Hg19::chr16:83649482..83649491,+#_1b95cd093abad85ff1daec551ffc50b7p@chr16:83649482..83649491, +
1.78e-29FFCP PHASE1:Hg19::chr14:36536932..36536937,-#_1b95cd093abad85ff1daec551ffc50b7p@chr14:36536932..36536937, -
1.78e-29FFCP PHASE1:Hg19::chr8:97965705..97965721,-#_1b95cd093abad85ff1daec551ffc50b7p@chr8:97965705..97965721, -
1.78e-29FFCP PHASE1:Hg19::chr12:84664700..84664710,+#_1b95cd093abad85ff1daec551ffc50b7p1@ENST00000547882
1.78e-29FFCP PHASE1:Hg19::chr10:129703363..129703373,+#_1b95cd093abad85ff1daec551ffc50b7p@chr10:129703363..129703373, +
1.78e-29FFCP PHASE2:Hg19::chr7:95776211..95776254,-#_1b95cd093abad85ff1daec551ffc50b7p@chr7:95776211..95776254, -
1.78e-29FFCP PHASE2:Hg19::chr19:46531131..46531136,+#_1b95cd093abad85ff1daec551ffc50b7p@chr19:46531131..46531136, +
1.78e-29FFCP PHASE1:Hg19::chr1:168756151..168756165,+#_1b95cd093abad85ff1daec551ffc50b7p2@ENST00000420691
1.78e-29FFCP PHASE1:Hg19::chr4:6324309..6324314,-#_1b95cd093abad85ff1daec551ffc50b7p43@PPP2R2C
1.78e-29FFCP PHASE2:Hg19::chr9:17454025..17454033,+#_1b95cd093abad85ff1daec551ffc50b7p@chr9:17454025..17454033, +
1.78e-29FFCP PHASE2:Hg19::chr7:21209872..21209910,+#_1b95cd093abad85ff1daec551ffc50b7p@chr7:21209872..21209910, +
1.78e-29FFCP PHASE2:Hg19::chr6:44681761..44681769,-#_1b95cd093abad85ff1daec551ffc50b7p@chr6:44681761..44681769, -
1.78e-29FFCP PHASE2:Hg19::chr17:39140411..39140419,-#_1b95cd093abad85ff1daec551ffc50b7p5@KRT40
1.78e-29FFCP PHASE1:Hg19::chr19:46763803..46763808,-#_1b95cd093abad85ff1daec551ffc50b7p@chr19:46763803..46763808, -
1.78e-29FFCP PHASE1:Hg19::chr17:79974020..79974025,+#_1b95cd093abad85ff1daec551ffc50b7p@chr17:79974020..79974025, +
1.78e-29FFCP PHASE1:Hg19::chr9:125306070..125306106,+#_1b95cd093abad85ff1daec551ffc50b7p@chr9:125306070..125306106, +
1.78e-29FFCP PHASE2:Hg19::chr1:100110851..100110860,+#_1b95cd093abad85ff1daec551ffc50b7p@chr1:100110851..100110860, +
1.78e-29FFCP PHASE1:Hg19::chr8:57525544..57525580,+#_1b95cd093abad85ff1daec551ffc50b7p@chr8:57525544..57525580, +
1.78e-29FFCP PHASE1:Hg19::chr2:220594730..220594748,+#_1b95cd093abad85ff1daec551ffc50b7p2@ENST00000442416
1.78e-29FFCP PHASE2:Hg19::chr7:79765099..79765103,+#_1b95cd093abad85ff1daec551ffc50b7p29@GNAI1
1.78e-29FFCP PHASE2:Hg19::chr4:41749788..41749795,-#_1b95cd093abad85ff1daec551ffc50b7p10@PHOX2B
1.78e-29FFCP PHASE2:Hg19::chr3:95401649..95401655,-#_1b95cd093abad85ff1daec551ffc50b7p3@ENST00000463799
1.78e-29FFCP PHASE2:Hg19::chr21:43917055..43917058,-#_1b95cd093abad85ff1daec551ffc50b7p@chr21:43917055..43917058, -
1.78e-29FFCP PHASE2:Hg19::chr17:70939741..70939790,-#_1b95cd093abad85ff1daec551ffc50b7p@chr17:70939741..70939790, -
1.78e-29FFCP PHASE2:Hg19::chr14:25326297..25326305,-#_1b95cd093abad85ff1daec551ffc50b7p@chr14:25326297..25326305, -
1.78e-29FFCP PHASE2:Hg19::chr5:33650078..33650111,-#_1b95cd093abad85ff1daec551ffc50b7p@chr5:33650078..33650111, -
1.78e-29FFCP PHASE1:Hg19::chr14:25326297..25326305,-#_1b95cd093abad85ff1daec551ffc50b7p@chr14:25326297..25326305, -
1.78e-29FFCP PHASE1:Hg19::chr2:234862417..234862434,+#_1b95cd093abad85ff1daec551ffc50b7p6@TRPM8
1.78e-29FFCP PHASE2:Hg19::chr2:194837773..194837784,-#_1b95cd093abad85ff1daec551ffc50b7p@chr2:194837773..194837784, -
1.78e-29FFCP PHASE2:Hg19::chr10:129704562..129704569,+#_1b95cd093abad85ff1daec551ffc50b7p@chr10:129704562..129704569, +
1.78e-29FFCP PHASE1:Hg19::chr12:133040060..133040064,+#_1b95cd093abad85ff1daec551ffc50b7p@chr12:133040060..133040064, +
1.78e-29FFCP PHASE1:Hg19::chr6:998897..998898,-#_1b95cd093abad85ff1daec551ffc50b7p@chr6:998897..998898, -
1.78e-29FFCP PHASE1:Hg19::chr4:3838289..3838308,-#_1b95cd093abad85ff1daec551ffc50b7p@chr4:3838289..3838308, -
1.78e-29FFCP PHASE2:Hg19::chrX:69542573..69542578,+#_1b95cd093abad85ff1daec551ffc50b7p@chrX:69542573..69542578, +
1.78e-29FFCP PHASE2:Hg19::chr12:51116443..51116452,+#_1b95cd093abad85ff1daec551ffc50b7p@chr12:51116443..51116452, +
1.78e-29FFCP PHASE1:Hg19::chr3:150914094..150914095,+#_1b95cd093abad85ff1daec551ffc50b7p@chr3:150914094..150914095, +
1.78e-29FFCP PHASE2:Hg19::chr8:121815999..121816003,-#_1b95cd093abad85ff1daec551ffc50b7p@chr8:121815999..121816003, -
1.78e-29FFCP PHASE2:Hg19::chr2:97626442..97626445,-#_1b95cd093abad85ff1daec551ffc50b7p@chr2:97626442..97626445, -
1.78e-29FFCP PHASE1:Hg19::chrX:48056224..48056233,-#_1b95cd093abad85ff1daec551ffc50b7p1@SSX5
1.78e-29FFCP PHASE1:Hg19::chr7:95766200..95766209,-#_1b95cd093abad85ff1daec551ffc50b7p@chr7:95766200..95766209, -
1.78e-29FFCP PHASE2:Hg19::chr9:95426545..95426559,-#_1b95cd093abad85ff1daec551ffc50b7p@chr9:95426545..95426559, -
1.78e-29FFCP PHASE2:Hg19::chr3:86703134..86703137,-#_1b95cd093abad85ff1daec551ffc50b7p@chr3:86703134..86703137, -
1.78e-29FFCP PHASE2:Hg19::chr18:39798771..39798780,-#_1b95cd093abad85ff1daec551ffc50b7p@chr18:39798771..39798780, -
1.78e-29FFCP PHASE2:Hg19::chr12:76206813..76206837,-#_1b95cd093abad85ff1daec551ffc50b7p@chr12:76206813..76206837, -
1.78e-29FFCP PHASE1:Hg19::chr4:157516018..157516023,+#_1b95cd093abad85ff1daec551ffc50b7p@chr4:157516018..157516023, +
1.78e-29FFCP PHASE2:Hg19::chr8:98108427..98108430,-#_1b95cd093abad85ff1daec551ffc50b7p@chr8:98108427..98108430, -
1.78e-29FFCP PHASE1:Hg19::chr5:134920622..134920655,+#_1b95cd093abad85ff1daec551ffc50b7p@chr5:134920622..134920655, +
1.78e-29FFCP PHASE2:Hg19::chr4:81460545..81460547,-#_1b95cd093abad85ff1daec551ffc50b7p@chr4:81460545..81460547, -
1.78e-29FFCP PHASE2:Hg19::chr10:129703363..129703373,+#_1b95cd093abad85ff1daec551ffc50b7p@chr10:129703363..129703373, +
1.78e-29FFCP PHASE1:Hg19::chr6:64762702..64762707,+#_1b95cd093abad85ff1daec551ffc50b7p@chr6:64762702..64762707, +
1.78e-29FFCP PHASE1:Hg19::chr11:41519057..41519065,-#_1b95cd093abad85ff1daec551ffc50b7p@chr11:41519057..41519065, -
1.78e-29FFCP PHASE1:Hg19::chr3:86701902..86701920,-#_1b95cd093abad85ff1daec551ffc50b7p@chr3:86701902..86701920, -
1.78e-29FFCP PHASE1:Hg19::chr21:26151976..26151979,+#_1b95cd093abad85ff1daec551ffc50b7p@chr21:26151976..26151979, +
1.78e-29FFCP PHASE2:Hg19::chr8:54464033..54464036,-#_1b95cd093abad85ff1daec551ffc50b7p@chr8:54464033..54464036, -
1.78e-29FFCP PHASE2:Hg19::chr3:1991867..1991875,-#_1b95cd093abad85ff1daec551ffc50b7p@chr3:1991867..1991875, -
1.78e-29FFCP PHASE2:Hg19::chr2:68113370..68113379,-#_1b95cd093abad85ff1daec551ffc50b7p@chr2:68113370..68113379, -
1.78e-29FFCP PHASE2:Hg19::chr20:2779313..2779314,-#_1b95cd093abad85ff1daec551ffc50b7p16@CPXM1
1.78e-29FFCP PHASE2:Hg19::chr1:181360920..181360925,+#_1b95cd093abad85ff1daec551ffc50b7p@chr1:181360920..181360925, +
1.78e-29FFCP PHASE2:Hg19::chr12:41186960..41186982,-#_1b95cd093abad85ff1daec551ffc50b7p@chr12:41186960..41186982, -
1.78e-29FFCP PHASE1:Hg19::chr8:98103977..98103981,-#_1b95cd093abad85ff1daec551ffc50b7p@chr8:98103977..98103981, -
1.78e-29FFCP PHASE1:Hg19::chr5:33619040..33619056,-#_1b95cd093abad85ff1daec551ffc50b7p@chr5:33619040..33619056, -
1.78e-29FFCP PHASE1:Hg19::chr2:241625621..241625629,+#_1b95cd093abad85ff1daec551ffc50b7p2@ENST00000407635
1.78e-29FFCP PHASE2:Hg19::chr8:116215298..116215305,+#_1b95cd093abad85ff1daec551ffc50b7p@chr8:116215298..116215305, +
1.78e-29FFCP PHASE2:Hg19::chr2:222127471..222127478,-#_1b95cd093abad85ff1daec551ffc50b7p@chr2:222127471..222127478, -
1.78e-29FFCP PHASE2:Hg19::chr3:78360522..78360543,+#_1b95cd093abad85ff1daec551ffc50b7p@chr3:78360522..78360543, +
1.78e-29FFCP PHASE2:Hg19::chr2:135170047..135170048,+#_1b95cd093abad85ff1daec551ffc50b7p@chr2:135170047..135170048, +
1.78e-29FFCP PHASE2:Hg19::chr13:92571088..92571098,-#_1b95cd093abad85ff1daec551ffc50b7p@chr13:92571088..92571098, -

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