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{{CL
{{CL
|id=CL:0002580
|alt_id=
|name=preadipocyte of the breast
|namespace=cell
|def="A preadipocyte that is part of the breast." [GOC:tfm]
|xref=
|is_a=CL:0002334
|synonym=
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=tmeehan
|created_by=tmeehan
|obo_creation_date=2011-03-03T04:19:46Z
|def="A preadipocyte that is part of the breast." [GOC:tfm]
|subset=
|adjacent_to=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=CL:0002580
|is_a=CL:0002334
|is_obsolete=
|located_in=
|located_in=
|name=preadipocyte of the breast
|namespace=FANTOM
|obo_creation_date=2011-03-03T04:19:46Z
|part_of=UBERON:0000310
|part_of=UBERON:0000310
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.obo.owl;;IAO:0000412 http://purl.obolibrary.org/obo/cl.owl
|is_obsolete=
|preceded_by=
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.owl;;IAO:0000412 http://purl.obolibrary.org/obo/cl.owl
|subset=
|synonym=
|union_of=
|xref=
}}
}}

Latest revision as of 16:44, 12 September 2014

Name:preadipocyte of the breast
Namespace:FANTOM
Definition:"A preadipocyte that is part of the breast." [GOC:tfm]
Created by:tmeehan
Creation date:2011-03-03T04:19:46Z


Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:CL:0002334(preadipocyte)
part_of:UBERON:0000310(breast)



Children


derives from:FF:0000139 (human preadipocyte of the breast sample)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.

Human (Homo sapiens)

Mouse (Mus musculus)


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002580 (preadipocyte of the breast), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
6.24e-88FFCP PHASE1:Hg19::chr6:75474615..75474618,+#_288979292e5120cbb9f15626c73ea844p@chr6:75474615..75474618, +
6.24e-88FFCP PHASE2:Hg19::chr6:75474615..75474618,+#_288979292e5120cbb9f15626c73ea844p@chr6:75474615..75474618, +
5.41e-85FFCP PHASE1:Hg19::chr1:240577171..240577181,-#_b9be1fac1a44db0d7e804c01c9093fc0p@chr1:240577171..240577181, -
5.41e-85FFCP PHASE2:Hg19::chr1:240577171..240577181,-#_b9be1fac1a44db0d7e804c01c9093fc0p@chr1:240577171..240577181, -
1.01e-74FFCP PHASE1:Hg19::chr7:134430175..134430178,+#_6b2baf3ab0a3c40a2a0329af41780d9bp85@CALD1
1.01e-74FFCP PHASE2:Hg19::chr7:134430175..134430178,+#_6b2baf3ab0a3c40a2a0329af41780d9bp85@CALD1
1.54e-66FFCP PHASE1:Hg19::chr4:112437339..112437350,+#_80cb216cc8350b845798233c3c75c20fp@chr4:112437339..112437350, +
1.54e-66FFCP PHASE2:Hg19::chr4:112437339..112437350,+#_80cb216cc8350b845798233c3c75c20fp@chr4:112437339..112437350, +
2.39e-66FFCP PHASE1:Hg19::chr1:3603926..3603929,+#_f9c3719c5f6bc556cbc7baff6fa69aabp@chr1:3603926..3603929, +
2.39e-66FFCP PHASE1:Hg19::chr2:13180474..13180475,-#_f9c3719c5f6bc556cbc7baff6fa69aabp@chr2:13180474..13180475, -
2.39e-66FFCP PHASE1:Hg19::chr5:35771474..35771476,+#_f9c3719c5f6bc556cbc7baff6fa69aabp@chr5:35771474..35771476, +
2.39e-66FFCP PHASE2:Hg19::chr6:75794482..75794491,-#_f9c3719c5f6bc556cbc7baff6fa69aabp19@AL359627
2.39e-66FFCP PHASE1:Hg19::chr22:44140357..44140361,+#_f9c3719c5f6bc556cbc7baff6fa69aabp@chr22:44140357..44140361, +
2.39e-66FFCP PHASE2:Hg19::chr5:35771474..35771476,+#_f9c3719c5f6bc556cbc7baff6fa69aabp@chr5:35771474..35771476, +
2.39e-66FFCP PHASE2:Hg19::chr2:13180474..13180475,-#_f9c3719c5f6bc556cbc7baff6fa69aabp@chr2:13180474..13180475, -
2.39e-66FFCP PHASE2:Hg19::chr1:3603926..3603929,+#_f9c3719c5f6bc556cbc7baff6fa69aabp@chr1:3603926..3603929, +
2.39e-66FFCP PHASE1:Hg19::chr7:150870947..150870948,+#_f9c3719c5f6bc556cbc7baff6fa69aabp@chr7:150870947..150870948, +
2.39e-66FFCP PHASE2:Hg19::chr22:44140357..44140361,+#_f9c3719c5f6bc556cbc7baff6fa69aabp@chr22:44140357..44140361, +
2.39e-66FFCP PHASE1:Hg19::chr6:75794482..75794491,-#_f9c3719c5f6bc556cbc7baff6fa69aabp19@AL359627
2.39e-66FFCP PHASE2:Hg19::chr7:150870947..150870948,+#_f9c3719c5f6bc556cbc7baff6fa69aabp@chr7:150870947..150870948, +
3.01e-66FFCP PHASE2:Hg19::chr15:39486361..39486371,-#_337b703ad4af8ad6f924f9e0e3e86d75p5@ENST00000560743
3.01e-66FFCP PHASE1:Hg19::chr15:39486361..39486371,-#_337b703ad4af8ad6f924f9e0e3e86d75p5@ENST00000560743
3.35e-66FFCP PHASE1:Hg19::chr6:75916067..75916078,-#_d70bd2b569f4d7a7e421a0986958f8a4p30@COL12A1
3.35e-66FFCP PHASE2:Hg19::chr6:75916067..75916078,-#_d70bd2b569f4d7a7e421a0986958f8a4p30@COL12A1
4.68e-66FFCP PHASE1:Hg19::chr15:39402510..39402513,-#_b5c52548efa08e25f52a415ff72430f5p@chr15:39402510..39402513, -
4.68e-66FFCP PHASE2:Hg19::chr15:39402510..39402513,-#_b5c52548efa08e25f52a415ff72430f5p@chr15:39402510..39402513, -
4.46e-60FFCP PHASE2:Hg19::chr19:18899082..18899091,+#_53dd4e5f4ec6258e090edab1e82d3378p@chr19:18899082..18899091, +
4.46e-60FFCP PHASE1:Hg19::chr19:18899082..18899091,+#_53dd4e5f4ec6258e090edab1e82d3378p@chr19:18899082..18899091, +
6.68e-60FFCP PHASE2:Hg19::chr1:103471622..103471650,+#_3e1ed62f1c47cbaf4cc18637c9f49439p@chr1:103471622..103471650, +
6.68e-60FFCP PHASE1:Hg19::chr1:103471622..103471650,+#_3e1ed62f1c47cbaf4cc18637c9f49439p@chr1:103471622..103471650, +
1.22e-59FFCP PHASE2:Hg19::chr1:240448546..240448559,+#_0ddde7c72f01d3243f48c5a9e745784ep@chr1:240448546..240448559, +
1.22e-59FFCP PHASE1:Hg19::chr1:240448546..240448559,+#_0ddde7c72f01d3243f48c5a9e745784ep@chr1:240448546..240448559, +
6.02e-55FFCP PHASE1:Hg19::chr4:112437251..112437278,+#_6d2585c9432ca74ba8455621c3ee0a30p@chr4:112437251..112437278, +
6.02e-55FFCP PHASE2:Hg19::chr4:112437251..112437278,+#_6d2585c9432ca74ba8455621c3ee0a30p@chr4:112437251..112437278, +
2.87e-53FFCP PHASE2:Hg19::chr11:66811898..66811900,-#_0c453ba88c404db9c67613b841686af3p@chr11:66811898..66811900, -
2.87e-53FFCP PHASE1:Hg19::chr11:66811898..66811900,-#_0c453ba88c404db9c67613b841686af3p@chr11:66811898..66811900, -
6.39e-53FFCP PHASE1:Hg19::chr7:73462921..73462932,+#_5ea54fc6bd5192309b0b212f58e62219p@chr7:73462921..73462932, +
6.39e-53FFCP PHASE2:Hg19::chr7:73462921..73462932,+#_5ea54fc6bd5192309b0b212f58e62219p@chr7:73462921..73462932, +
2.64e-50FFCP PHASE2:Hg19::chr15:81242191..81242201,+#_6cb86be60c9ea1a6bb588bc26f7652a1p19@KIAA1199
2.64e-50FFCP PHASE1:Hg19::chr15:81242191..81242201,+#_6cb86be60c9ea1a6bb588bc26f7652a1p19@KIAA1199
2.25e-46FFCP PHASE2:Hg19::chr7:73483140..73483149,+#_232605dc970a7deb86373dc3b5445c21p31@ELN
2.25e-46FFCP PHASE1:Hg19::chr7:73483140..73483149,+#_232605dc970a7deb86373dc3b5445c21p31@ELN
4.87e-46FFCP PHASE1:Hg19::chr19:18897380..18897392,+#_6523827df8e247a1c16457dddd05f25fp@chr19:18897380..18897392, +
4.87e-46FFCP PHASE2:Hg19::chr19:18897380..18897392,+#_6523827df8e247a1c16457dddd05f25fp@chr19:18897380..18897392, +
7.81e-45FFCP PHASE2:Hg19::chr6:159660765..159660776,+#_867d8cc5bf517b9dfe41ab7030d4ea7bp@chr6:159660765..159660776, +
7.81e-45FFCP PHASE1:Hg19::chr6:159660765..159660776,+#_867d8cc5bf517b9dfe41ab7030d4ea7bp@chr6:159660765..159660776, +
1.91e-44FFCP PHASE1:Hg19::chr7:22900150..22900172,+#_744c04165d85ee8f4e5fea68fa45bd81p@chr7:22900150..22900172, +
1.91e-44FFCP PHASE2:Hg19::chr7:22900150..22900172,+#_744c04165d85ee8f4e5fea68fa45bd81p@chr7:22900150..22900172, +
3.41e-43FFCP PHASE2:Hg19::chr2:191745264..191745275,+#_358fb0e3f3f416ec56ad059b68a21255p21@GLS
3.41e-43FFCP PHASE2:Hg19::chr15:68805210..68805226,+#_358fb0e3f3f416ec56ad059b68a21255p@chr15:68805210..68805226, +
3.41e-43FFCP PHASE1:Hg19::chr2:191745264..191745275,+#_358fb0e3f3f416ec56ad059b68a21255p21@GLS
3.41e-43FFCP PHASE1:Hg19::chr15:68805210..68805226,+#_358fb0e3f3f416ec56ad059b68a21255p@chr15:68805210..68805226, +
1.96e-40FFCP PHASE2:Hg19::chr19:18895742..18895757,-#_f14e34d663e0d36e35c2eedc6d3da652p@chr19:18895742..18895757, -
1.96e-40FFCP PHASE1:Hg19::chr19:18895742..18895757,-#_f14e34d663e0d36e35c2eedc6d3da652p@chr19:18895742..18895757, -
3.83e-40FFCP PHASE2:Hg19::chr19:18900893..18900901,-#_a14cdda6378cd9ac29b616d81a9edba5p@chr19:18900893..18900901, -
3.83e-40FFCP PHASE1:Hg19::chr19:18900893..18900901,-#_a14cdda6378cd9ac29b616d81a9edba5p@chr19:18900893..18900901, -
7.56e-39FFCP PHASE2:Hg19::chr4:154926484..154926525,+#_62a4e06cd9c0c1d9d7a9a7a3aac380f7p@chr4:154926484..154926525, +
7.56e-39FFCP PHASE1:Hg19::chr4:154926484..154926525,+#_62a4e06cd9c0c1d9d7a9a7a3aac380f7p@chr4:154926484..154926525, +
1.23e-38FFCP PHASE2:Hg19::chr5:111312488..111312498,-#_c546c27e787c3f4ff74171e238c66320p35@C5orf13
1.23e-38FFCP PHASE1:Hg19::chr5:111312488..111312498,-#_c546c27e787c3f4ff74171e238c66320p35@C5orf13
2.18e-38FFCP PHASE2:Hg19::chr15:39534820..39534834,+#_c00f45bffbe04d58ba874f7b9d2df2e6p@chr15:39534820..39534834, +
2.18e-38FFCP PHASE1:Hg19::chr7:85399962..85399979,+#_c00f45bffbe04d58ba874f7b9d2df2e6p@chr7:85399962..85399979, +
2.18e-38FFCP PHASE1:Hg19::chr15:39534820..39534834,+#_c00f45bffbe04d58ba874f7b9d2df2e6p@chr15:39534820..39534834, +
2.18e-38FFCP PHASE2:Hg19::chr7:85399962..85399979,+#_c00f45bffbe04d58ba874f7b9d2df2e6p@chr7:85399962..85399979, +
2.38e-38FFCP PHASE2:Hg19::chr19:18899713..18899727,-#_2619f4e37456bc94a3e4827ddb83b59bp@chr19:18899713..18899727, -
2.38e-38FFCP PHASE1:Hg19::chr19:18899713..18899727,-#_2619f4e37456bc94a3e4827ddb83b59bp@chr19:18899713..18899727, -
3.19e-38FFCP PHASE2:Hg19::chr4:169552329..169552340,+#_054f091eec230c70d750b5befa165a11p34@PALLD
3.19e-38FFCP PHASE1:Hg19::chr4:169552329..169552340,+#_054f091eec230c70d750b5befa165a11p34@PALLD
5.08e-38FFCP PHASE2:Hg19::chr19:18897406..18897417,-#_4f5a853ac7f66b1c069aeb6da7fed205p6@COMP
5.08e-38FFCP PHASE1:Hg19::chr19:18897406..18897417,-#_4f5a853ac7f66b1c069aeb6da7fed205p6@COMP
5.76e-38FFCP PHASE1:Hg19::chr10:105428632..105428639,-#_f44f1dec7c7d98d5c1d182ca48b141a2p26@SH3PXD2A
5.76e-38FFCP PHASE2:Hg19::chr10:105428632..105428639,-#_f44f1dec7c7d98d5c1d182ca48b141a2p26@SH3PXD2A
7.42e-38FFCP PHASE1:Hg19::chr19:18899552..18899562,-#_25c5bd411bdfc8952823179525e537aap@chr19:18899552..18899562, -
7.42e-38FFCP PHASE2:Hg19::chr15:81214436..81214445,+#_25c5bd411bdfc8952823179525e537aap13@KIAA1199
7.42e-38FFCP PHASE1:Hg19::chr15:81214436..81214445,+#_25c5bd411bdfc8952823179525e537aap13@KIAA1199
7.42e-38FFCP PHASE2:Hg19::chr19:18899552..18899562,-#_25c5bd411bdfc8952823179525e537aap@chr19:18899552..18899562, -
2.03e-37FFCP PHASE1:Hg19::chr7:137532379..137532400,-#_f6ae9cf896dea5a313e6a7ce397e3a73p@chr7:137532379..137532400, -
2.03e-37FFCP PHASE2:Hg19::chr7:137532379..137532400,-#_f6ae9cf896dea5a313e6a7ce397e3a73p@chr7:137532379..137532400, -
7.74e-36FFCP PHASE2:Hg19::chr19:18893583..18893586,+#_d767473561eb9f75d46bffd23fe8b976p@chr19:18893583..18893586, +
7.74e-36FFCP PHASE1:Hg19::chr19:18893583..18893586,+#_d767473561eb9f75d46bffd23fe8b976p@chr19:18893583..18893586, +
1.11e-35FFCP PHASE1:Hg19::chr12:8814756..8814767,-#_f92f51229c68c0fbd1b3be57fcc37005p19@MFAP5
1.11e-35FFCP PHASE1:Hg19::chr13:102104738..102104747,+#_f92f51229c68c0fbd1b3be57fcc37005p11@ITGBL1
1.11e-35FFCP PHASE2:Hg19::chr12:8814756..8814767,-#_f92f51229c68c0fbd1b3be57fcc37005p19@MFAP5
1.11e-35FFCP PHASE2:Hg19::chr13:102104738..102104747,+#_f92f51229c68c0fbd1b3be57fcc37005p11@ITGBL1
1.4e-35FFCP PHASE1:Hg19::chr6:35216360..35216374,+#_a3711802b27e4c5790ac29b4f4722ccbp10@SCUBE3
1.4e-35FFCP PHASE2:Hg19::chr6:35216360..35216374,+#_a3711802b27e4c5790ac29b4f4722ccbp10@SCUBE3
2.53e-35FFCP PHASE2:Hg19::chr15:68631946..68631967,-#_5550d371fc6028477bfd016b92dcbbf2p@chr15:68631946..68631967, -
2.53e-35FFCP PHASE1:Hg19::chr15:68631946..68631967,-#_5550d371fc6028477bfd016b92dcbbf2p@chr15:68631946..68631967, -
3.33e-34FFCP PHASE2:Hg19::chr15:39486488..39486494,-#_b26e930d0e9373d67f8805aac57f873fp6@ENST00000560743
3.33e-34FFCP PHASE1:Hg19::chr15:39486488..39486494,-#_b26e930d0e9373d67f8805aac57f873fp6@ENST00000560743
5.96e-34FFCP PHASE1:Hg19::chr4:154711058..154711075,+#_7c5197eac83b30fa8ab851e6a9dbb85ep@chr4:154711058..154711075, +
5.96e-34FFCP PHASE2:Hg19::chr4:154711058..154711075,+#_7c5197eac83b30fa8ab851e6a9dbb85ep@chr4:154711058..154711075, +
5.96e-34FFCP PHASE2:Hg19::chr16:4181309..4181310,-#_7c5197eac83b30fa8ab851e6a9dbb85ep@chr16:4181309..4181310, -
5.96e-34FFCP PHASE1:Hg19::chr16:4181309..4181310,-#_7c5197eac83b30fa8ab851e6a9dbb85ep@chr16:4181309..4181310, -
9.1e-34FFCP PHASE1:Hg19::chr9:38437716..38437729,+#_20fc63f4d5361e171d0b6ecd451d902ep@chr9:38437716..38437729, +
9.1e-34FFCP PHASE2:Hg19::chr9:38437716..38437729,+#_20fc63f4d5361e171d0b6ecd451d902ep@chr9:38437716..38437729, +
1.48e-33FFCP PHASE1:Hg19::chr6:101841257..101841271,+#_118417048a700e5052304876f282aef9p3@HM149340
1.48e-33FFCP PHASE2:Hg19::chr6:101841257..101841271,+#_118417048a700e5052304876f282aef9p3@HM149340
1.65e-33FFCP PHASE1:Hg19::chr7:40251315..40251325,-#_72eaed3c9368ef4e8bcb573a4df1f06ap@chr7:40251315..40251325, -
1.65e-33FFCP PHASE2:Hg19::chr7:40251315..40251325,-#_72eaed3c9368ef4e8bcb573a4df1f06ap@chr7:40251315..40251325, -

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