Personal tools

CL:0002559: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(3 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{CL
{{CL
|id=CL:0002559
|alt_id=
|name=hair follicle cell
|namespace=cell
|def="An animal cell that is part of a hair follicle." [GOC:tfm]
|xref=
|is_a=CL:0002371
|synonym=
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=tmeehan
|created_by=tmeehan
|obo_creation_date=2011-03-01T04:11:01Z
|def="An animal cell that is part of a hair follicle." [GOC:tfm]
|subset=
|adjacent_to=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=CL:0002559
|is_a=CL:0002371
|is_obsolete=
|located_in=
|located_in=
|name=hair follicle cell
|namespace=FANTOM
|obo_creation_date=2011-03-01T04:11:01Z
|part_of=UBERON:0002073
|part_of=UBERON:0002073
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.obo.owl;;IAO:0000412 http://purl.obolibrary.org/obo/cl.owl
|is_obsolete=
|preceded_by=
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.owl;;IAO:0000412 http://purl.obolibrary.org/obo/cl.owl
|subset=
|synonym=
|union_of=
|xref=
}}
}}

Latest revision as of 16:44, 12 September 2014

Name:hair follicle cell
Namespace:FANTOM
Definition:"An animal cell that is part of a hair follicle." [GOC:tfm]
Created by:tmeehan
Creation date:2011-03-01T04:11:01Z


Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:CL:0002371(somatic cell)
part_of:UBERON:0002073(hair follicle)



Children


is a:CL:0002560 (inner root sheath cell),CL:0002561 (outer root sheath cell),CL:0002562 (hair germinal matrix cell)
derives from:FF:0000072 (human hair follicle cell sample)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.

Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002559 (hair follicle cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
1.48e-40FFCP PHASE1:Hg19::chr7:127963997..127964004,-#_bb45e999e0798b1cde0b4f72ee4cefdep@chr7:127963997..127964004, -
1.48e-40FFCP PHASE2:Hg19::chr7:127963997..127964004,-#_bb45e999e0798b1cde0b4f72ee4cefdep@chr7:127963997..127964004, -
3.31e-40FFCP PHASE2:Hg19::chr16:85617034..85617043,-#_57c12d1186822a22e1ccf91d0536dcadp@chr16:85617034..85617043, -
3.31e-40FFCP PHASE1:Hg19::chr16:85617034..85617043,-#_57c12d1186822a22e1ccf91d0536dcadp@chr16:85617034..85617043, -
4.05e-40FFCP PHASE2:Hg19::chr3:4723000..4723006,+#_d71ebdd1c99b09066c1f49e9700b067dp@chr3:4723000..4723006, +
4.05e-40FFCP PHASE1:Hg19::chr5:174252850..174252859,+#_d71ebdd1c99b09066c1f49e9700b067dp@chr5:174252850..174252859, +
4.05e-40FFCP PHASE2:Hg19::chr5:174252850..174252859,+#_d71ebdd1c99b09066c1f49e9700b067dp@chr5:174252850..174252859, +
4.05e-40FFCP PHASE1:Hg19::chr3:4723000..4723006,+#_d71ebdd1c99b09066c1f49e9700b067dp@chr3:4723000..4723006, +
9.7e-37FFCP PHASE2:Hg19::chr20:940152..940156,-#_493c1f052c1fd445befc9bf8698fb774p@chr20:940152..940156, -
9.7e-37FFCP PHASE1:Hg19::chr20:940152..940156,-#_493c1f052c1fd445befc9bf8698fb774p@chr20:940152..940156, -
3.25e-36FFCP PHASE1:Hg19::chr1:119530682..119530692,-#_2785440115bbd06bb485f32915241210p10@TBX15
3.25e-36FFCP PHASE2:Hg19::chr1:119530682..119530692,-#_2785440115bbd06bb485f32915241210p10@TBX15
4.66e-36FFCP PHASE2:Hg19::chr17:73682761..73682766,+#_1bd151f9b962475c9865818b5029a361p@chr17:73682761..73682766, +
4.66e-36FFCP PHASE1:Hg19::chr17:73682761..73682766,+#_1bd151f9b962475c9865818b5029a361p@chr17:73682761..73682766, +
1.44e-32FFCP PHASE2:Hg19::chr9:132337391..132337396,+#_d6fb70c786b995a01be5b88d5fef2680p2@ENST00000443993, p2@uc004bya.1
1.44e-32FFCP PHASE2:Hg19::chr1:8950583..8950588,+#_d6fb70c786b995a01be5b88d5fef2680p@chr1:8950583..8950588, +
1.44e-32FFCP PHASE1:Hg19::chr1:8950583..8950588,+#_d6fb70c786b995a01be5b88d5fef2680p@chr1:8950583..8950588, +
1.44e-32FFCP PHASE1:Hg19::chr9:132337391..132337396,+#_d6fb70c786b995a01be5b88d5fef2680p2@ENST00000443993, p2@uc004bya.1
1.7e-32FFCP PHASE2:Hg19::chr12:5198401..5198415,+#_2d4c79bd7aabdd65ce245d127d65c2f9p@chr12:5198401..5198415, +
1.7e-32FFCP PHASE1:Hg19::chr12:5198401..5198415,+#_2d4c79bd7aabdd65ce245d127d65c2f9p@chr12:5198401..5198415, +
1.7e-32FFCP PHASE2:Hg19::chr12:2163623..2163634,+#_2d4c79bd7aabdd65ce245d127d65c2f9p@chr12:2163623..2163634, +
1.7e-32FFCP PHASE1:Hg19::chr12:2163623..2163634,+#_2d4c79bd7aabdd65ce245d127d65c2f9p@chr12:2163623..2163634, +
2.86e-30FFCP PHASE2:Hg19::chr7:142563953..142563963,+#_409e76e46c1ff4491c7a0a7ffe901421p@chr7:142563953..142563963, +
2.86e-30FFCP PHASE1:Hg19::chr7:142563953..142563963,+#_409e76e46c1ff4491c7a0a7ffe901421p@chr7:142563953..142563963, +
3.66e-28FFCP PHASE2:Hg19::chr15:80842979..80842998,+#_ff3a14371ac12700bb32824a2eb23639p20@ARNT2
3.66e-28FFCP PHASE1:Hg19::chr15:80842979..80842998,+#_ff3a14371ac12700bb32824a2eb23639p20@ARNT2
3.91e-28FFCP PHASE1:Hg19::chr9:89892210..89892234,-#_4f4621679b6a5403c88a8e6dc445f83ap@chr9:89892210..89892234, -
3.91e-28FFCP PHASE2:Hg19::chr9:89892210..89892234,-#_4f4621679b6a5403c88a8e6dc445f83ap@chr9:89892210..89892234, -
7.91e-28FFCP PHASE1:Hg19::chr2:119605374..119605377,-#_dcfe40cabf32b5d8660575687f882052p7@EN1
7.91e-28FFCP PHASE2:Hg19::chr2:119605374..119605377,-#_dcfe40cabf32b5d8660575687f882052p7@EN1
2.72e-27FFCP PHASE1:Hg19::chr16:85617044..85617059,-#_4e30a8a8fd5101a3d1529bbcffa4e984p@chr16:85617044..85617059, -
2.72e-27FFCP PHASE2:Hg19::chr16:85617044..85617059,-#_4e30a8a8fd5101a3d1529bbcffa4e984p@chr16:85617044..85617059, -
2.72e-27FFCP PHASE2:Hg19::chr10:15760985..15760992,-#_4e30a8a8fd5101a3d1529bbcffa4e984p@chr10:15760985..15760992, -
2.72e-27FFCP PHASE1:Hg19::chr10:15760985..15760992,-#_4e30a8a8fd5101a3d1529bbcffa4e984p@chr10:15760985..15760992, -
4.63e-27FFCP PHASE2:Hg19::chr12:56224522..56224535,-#_5a03e8eb65f8bfcc3f009807b48da062p7@DNAJC14
4.63e-27FFCP PHASE1:Hg19::chr12:56224522..56224535,-#_5a03e8eb65f8bfcc3f009807b48da062p7@DNAJC14
1.85e-26FFCP PHASE2:Hg19::chr18:8747536..8747542,-#_d34d6fe504918af4ae18e64874116c16p@chr18:8747536..8747542, -
1.85e-26FFCP PHASE1:Hg19::chr18:8747536..8747542,-#_d34d6fe504918af4ae18e64874116c16p@chr18:8747536..8747542, -
1.48e-25FFCP PHASE1:Hg19::chr2:119605253..119605264,-#_5d7abd8c35a74327431b2976e3792620p5@EN1
1.48e-25FFCP PHASE2:Hg19::chr2:119605253..119605264,-#_5d7abd8c35a74327431b2976e3792620p5@EN1
1.2e-24FFCP PHASE2:Hg19::chr11:121896688..121896697,-#_22fbf49d10a4d0f49f2848138a126a71p@chr11:121896688..121896697, -
1.2e-24FFCP PHASE1:Hg19::chr11:121896688..121896697,-#_22fbf49d10a4d0f49f2848138a126a71p@chr11:121896688..121896697, -
1.35e-24FFCP PHASE1:Hg19::chr15:90348431..90348458,-#_58d95149a719ba82ea132c4682c4c5cfp17@ANPEP
1.35e-24FFCP PHASE2:Hg19::chr15:90348431..90348458,-#_58d95149a719ba82ea132c4682c4c5cfp17@ANPEP
1.02e-23FFCP PHASE2:Hg19::chr15:39534820..39534834,+#_c0624ee5f8b5f5e2db98df129ff64c80p@chr15:39534820..39534834, +
1.02e-23FFCP PHASE1:Hg19::chr15:39534820..39534834,+#_c0624ee5f8b5f5e2db98df129ff64c80p@chr15:39534820..39534834, +
1.14e-23FFCP PHASE2:Hg19::chr2:238153616..238153621,-#_bed572e586bac3aea29114830054ef1fp@chr2:238153616..238153621, -
1.14e-23FFCP PHASE1:Hg19::chr2:238153616..238153621,-#_bed572e586bac3aea29114830054ef1fp@chr2:238153616..238153621, -
1.61e-23FFCP PHASE1:Hg19::chr3:147109858..147109861,+#_fc7108fb001dce0ff3a0be2df7dfe30bp@chr3:147109858..147109861, +
1.61e-23FFCP PHASE2:Hg19::chr3:147109858..147109861,+#_fc7108fb001dce0ff3a0be2df7dfe30bp@chr3:147109858..147109861, +
1.81e-23FFCP PHASE2:Hg19::chr3:147128048..147128057,+#_000a8ff4ea319cf900e931e806b5c2d6p4@AB464362
1.81e-23FFCP PHASE1:Hg19::chr3:147128048..147128057,+#_000a8ff4ea319cf900e931e806b5c2d6p4@AB464362
2.77e-23FFCP PHASE1:Hg19::chr3:147112699..147112713,-#_437900e7f7dec5582e9c335487027e9ep@chr3:147112699..147112713, -
2.77e-23FFCP PHASE2:Hg19::chr3:147112699..147112713,-#_437900e7f7dec5582e9c335487027e9ep@chr3:147112699..147112713, -
3.75e-23FFCP PHASE1:Hg19::chr21:47405885..47405896,+#_ce9ded4abdf152033e11aaa97aa8e4d4p@chr21:47405885..47405896, +
3.75e-23FFCP PHASE2:Hg19::chr21:47405885..47405896,+#_ce9ded4abdf152033e11aaa97aa8e4d4p@chr21:47405885..47405896, +
5.46e-23FFCP PHASE2:Hg19::chr15:80800274..80800278,-#_7d4a6f8d4b19c9efdea406919b6f3ebfp@chr15:80800274..80800278, -
5.46e-23FFCP PHASE1:Hg19::chr15:80800274..80800278,-#_7d4a6f8d4b19c9efdea406919b6f3ebfp@chr15:80800274..80800278, -
8.54e-23FFCP PHASE2:Hg19::chr6:5498703..5498727,+#_40233aff23906941b920f3b399781ab5p@chr6:5498703..5498727, +
8.54e-23FFCP PHASE1:Hg19::chr6:5498703..5498727,+#_40233aff23906941b920f3b399781ab5p@chr6:5498703..5498727, +
3.99e-22FFCP PHASE2:Hg19::chr2:119605233..119605245,-#_2e8510729b20cfc9c994c24dc32809c6p8@EN1
3.99e-22FFCP PHASE1:Hg19::chr2:119605233..119605245,-#_2e8510729b20cfc9c994c24dc32809c6p8@EN1
5.15e-21FFCP PHASE2:Hg19::chr12:69754026..69754035,+#_27674fe8310f7e2beab8ec61e79ce11dp@chr12:69754026..69754035, +
5.15e-21FFCP PHASE2:Hg19::chr20:55403726..55403730,+#_27674fe8310f7e2beab8ec61e79ce11dp@chr20:55403726..55403730, +
5.15e-21FFCP PHASE2:Hg19::chr13:114108115..114108122,-#_27674fe8310f7e2beab8ec61e79ce11dp13@ADPRHL1
5.15e-21FFCP PHASE1:Hg19::chr7:93928562..93928567,+#_27674fe8310f7e2beab8ec61e79ce11dp@chr7:93928562..93928567, +
5.15e-21FFCP PHASE1:Hg19::chr13:50654430..50654438,+#_27674fe8310f7e2beab8ec61e79ce11dp@chr13:50654430..50654438, +
5.15e-21FFCP PHASE2:Hg19::chr9:88939319..88939326,-#_27674fe8310f7e2beab8ec61e79ce11dp25@ZCCHC6
5.15e-21FFCP PHASE2:Hg19::chr9:3330877..3330914,-#_27674fe8310f7e2beab8ec61e79ce11dp@chr9:3330877..3330914, -
5.15e-21FFCP PHASE1:Hg19::chr5:53358788..53358795,-#_27674fe8310f7e2beab8ec61e79ce11dp@chr5:53358788..53358795, -
5.15e-21FFCP PHASE2:Hg19::chr13:45914842..45914847,-#_27674fe8310f7e2beab8ec61e79ce11dp14@TPT1
5.15e-21FFCP PHASE2:Hg19::chr8:23210765..23210805,+#_27674fe8310f7e2beab8ec61e79ce11dp@chr8:23210765..23210805, +
5.15e-21FFCP PHASE1:Hg19::chr5:150398982..150399013,-#_27674fe8310f7e2beab8ec61e79ce11dp@chr5:150398982..150399013, -
5.15e-21FFCP PHASE1:Hg19::chr3:124485247..124485272,-#_27674fe8310f7e2beab8ec61e79ce11dp@chr3:124485247..124485272, -
5.15e-21FFCP PHASE1:Hg19::chr4:151246994..151247003,-#_27674fe8310f7e2beab8ec61e79ce11dp@chr4:151246994..151247003, -
5.15e-21FFCP PHASE1:Hg19::chr13:30075330..30075333,+#_27674fe8310f7e2beab8ec61e79ce11dp@chr13:30075330..30075333, +
5.15e-21FFCP PHASE1:Hg19::chr6:26305727..26305730,-#_27674fe8310f7e2beab8ec61e79ce11dp@chr6:26305727..26305730, -
5.15e-21FFCP PHASE2:Hg19::chr11:118789349..118789355,+#_27674fe8310f7e2beab8ec61e79ce11dp@chr11:118789349..118789355, +
5.15e-21FFCP PHASE1:Hg19::chr12:69754026..69754035,+#_27674fe8310f7e2beab8ec61e79ce11dp@chr12:69754026..69754035, +
5.15e-21FFCP PHASE1:Hg19::chr9:35748867..35748868,-#_27674fe8310f7e2beab8ec61e79ce11dp13@GBA2
5.15e-21FFCP PHASE1:Hg19::chr20:55403726..55403730,+#_27674fe8310f7e2beab8ec61e79ce11dp@chr20:55403726..55403730, +
5.15e-21FFCP PHASE2:Hg19::chr15:40773537..40773544,-#_27674fe8310f7e2beab8ec61e79ce11dp1@ENST00000489027
5.15e-21FFCP PHASE1:Hg19::chr13:114108115..114108122,-#_27674fe8310f7e2beab8ec61e79ce11dp13@ADPRHL1
5.15e-21FFCP PHASE1:Hg19::chr6:168333065..168333071,+#_27674fe8310f7e2beab8ec61e79ce11dp33@MLLT4
5.15e-21FFCP PHASE2:Hg19::chr2:30864461..30864472,+#_27674fe8310f7e2beab8ec61e79ce11dp11@LCLAT1
5.15e-21FFCP PHASE2:Hg19::chr11:6341147..6341156,-#_27674fe8310f7e2beab8ec61e79ce11dp14@PRKCDBP
5.15e-21FFCP PHASE1:Hg19::chr11:118789349..118789355,+#_27674fe8310f7e2beab8ec61e79ce11dp@chr11:118789349..118789355, +
5.15e-21FFCP PHASE2:Hg19::chr7:93928562..93928567,+#_27674fe8310f7e2beab8ec61e79ce11dp@chr7:93928562..93928567, +
5.15e-21FFCP PHASE2:Hg19::chr10:90750010..90750015,+#_27674fe8310f7e2beab8ec61e79ce11dp15@FAS
5.15e-21FFCP PHASE1:Hg19::chr13:45914842..45914847,-#_27674fe8310f7e2beab8ec61e79ce11dp14@TPT1
5.15e-21FFCP PHASE2:Hg19::chr5:53358788..53358795,-#_27674fe8310f7e2beab8ec61e79ce11dp@chr5:53358788..53358795, -
5.15e-21FFCP PHASE1:Hg19::chr11:6341147..6341156,-#_27674fe8310f7e2beab8ec61e79ce11dp14@PRKCDBP
5.15e-21FFCP PHASE1:Hg19::chr15:40773537..40773544,-#_27674fe8310f7e2beab8ec61e79ce11dp1@ENST00000489027
5.15e-21FFCP PHASE2:Hg19::chr13:50654430..50654438,+#_27674fe8310f7e2beab8ec61e79ce11dp@chr13:50654430..50654438, +
5.15e-21FFCP PHASE1:Hg19::chr9:88939319..88939326,-#_27674fe8310f7e2beab8ec61e79ce11dp25@ZCCHC6
5.15e-21FFCP PHASE2:Hg19::chr3:124485247..124485272,-#_27674fe8310f7e2beab8ec61e79ce11dp@chr3:124485247..124485272, -
5.15e-21FFCP PHASE2:Hg19::chr6:26305727..26305730,-#_27674fe8310f7e2beab8ec61e79ce11dp@chr6:26305727..26305730, -
5.15e-21FFCP PHASE1:Hg19::chr9:3330877..3330914,-#_27674fe8310f7e2beab8ec61e79ce11dp@chr9:3330877..3330914, -
5.15e-21FFCP PHASE2:Hg19::chr9:35748867..35748868,-#_27674fe8310f7e2beab8ec61e79ce11dp13@GBA2
5.15e-21FFCP PHASE1:Hg19::chr10:90750010..90750015,+#_27674fe8310f7e2beab8ec61e79ce11dp15@FAS

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=CL:0002559&oldid=3275507"