CL:0002550: Difference between revisions
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{{CL | {{CL | ||
| | |alt_id= | ||
|comment= | |comment= | ||
|created_by=tmeehan | |created_by=tmeehan | ||
| | |def="A fibroblast that is part of the conjuctiva of the eye." [GOC:tfm] | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
|disjoint_from= | |||
|has_quality= | |has_quality= | ||
|id=CL:0002550 | |||
|is_a=CL:0000057 | |||
|is_obsolete= | |||
|located_in= | |located_in= | ||
|part_of= | |name=fibroblast of the conjuctiva | ||
|namespace=FANTOM | |||
|obo_creation_date=2011-02-28T05:03:44Z | |||
|part_of=UBERON:0001811 | |||
|preceded_by= | |||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl | ||
| | |subset= | ||
| | |synonym= | ||
|union_of= | |||
|xref= | |||
}} | }} | ||
Latest revision as of 16:44, 12 September 2014
| Name: | fibroblast of the conjuctiva |
|---|---|
| Namespace: | FANTOM |
| Definition: | "A fibroblast that is part of the conjuctiva of the eye." [GOC:tfm] |
| Created by: | tmeehan |
| Creation date: | 2011-02-28T05:03:44Z |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | CL:0000057(fibroblast) |
|---|---|
| part_of: | UBERON:0001811(conjunctiva) |
Children
| derives from: | FF:0000061 (human fibroblast of conjuctivia sample) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 11531-120A1 (Fibroblast - Conjunctival, donor1)
- 11611-120I9
- 11692-122I9 (Fibroblast - Conjunctival, donor3)
Mouse (Mus musculus)
- 11531-120A1 (Fibroblast - Conjunctival, donor1)
- 11611-120I9
- 11692-122I9 (Fibroblast - Conjunctival, donor3)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002550 (fibroblast of the conjuctiva), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 6.62e-41 | FFCP PHASE1:Hg19::chr6:41562324..41562340,+#_11719df41130f8c372d709d519e08478 | p16@FOXP4 |
| 6.62e-41 | FFCP PHASE2:Hg19::chr6:41562324..41562340,+#_11719df41130f8c372d709d519e08478 | p16@FOXP4 |
| 2.21e-40 | FFCP PHASE2:Hg19::chr17:41614135..41614151,-#_954a1094efc4aa60d3bfdcefe7608bc8 | p20@ETV4 |
| 2.21e-40 | FFCP PHASE1:Hg19::chr17:41614135..41614151,-#_954a1094efc4aa60d3bfdcefe7608bc8 | p20@ETV4 |
| 3.61e-34 | FFCP PHASE1:Hg19::chr12:57624059..57624066,+#_9871a11a26182282dc2b92e20069e591 | p34@SHMT2 |
| 3.61e-34 | FFCP PHASE2:Hg19::chr12:57624059..57624066,+#_9871a11a26182282dc2b92e20069e591 | p34@SHMT2 |
| 7.06e-34 | FFCP PHASE2:Hg19::chr5:80813428..80813456,-#_d0538d6714f42d14d414ecee62deb315 | p@chr5:80813428..80813456, - |
| 7.06e-34 | FFCP PHASE1:Hg19::chr5:80813428..80813456,-#_d0538d6714f42d14d414ecee62deb315 | p@chr5:80813428..80813456, - |
| 2.78e-26 | FFCP PHASE2:Hg19::chr15:62919377..62919396,+#_6b6612befea215489e4ffd34b8519a55 | p@chr15:62919377..62919396, + |
| 2.78e-26 | FFCP PHASE1:Hg19::chr15:62919377..62919396,+#_6b6612befea215489e4ffd34b8519a55 | p@chr15:62919377..62919396, + |
| 5.13e-23 | FFCP PHASE1:Hg19::chr17:71064440..71064445,-#_01b993bce954f8779f735ae599f7be9c | p@chr17:71064440..71064445, - |
| 5.13e-23 | FFCP PHASE2:Hg19::chr17:71064440..71064445,-#_01b993bce954f8779f735ae599f7be9c | p@chr17:71064440..71064445, - |
| 6.4e-23 | FFCP PHASE2:Hg19::chr5:59744585..59744602,-#_75aac42adc78bb0a661809e1008dac54 | p60@PDE4D |
| 6.4e-23 | FFCP PHASE1:Hg19::chr5:59744585..59744602,-#_75aac42adc78bb0a661809e1008dac54 | p60@PDE4D |
| 1.88e-21 | FFCP PHASE2:Hg19::chr6:56013664..56013696,-#_92c4262623b337af61b28bc35b5983b0 | p@chr6:56013664..56013696, - |
| 1.88e-21 | FFCP PHASE1:Hg19::chr6:56013664..56013696,-#_92c4262623b337af61b28bc35b5983b0 | p@chr6:56013664..56013696, - |
| 5.16e-21 | FFCP PHASE2:Hg19::chr18:52969813..52969823,-#_32f96ccdcb2a6a548dcd629680cfc787 | p67@TCF4 |
| 5.16e-21 | FFCP PHASE1:Hg19::chr18:52969813..52969823,-#_32f96ccdcb2a6a548dcd629680cfc787 | p67@TCF4 |
| 1.3e-19 | FFCP PHASE1:Hg19::chr12:57849012..57849017,+#_86e6e7bbc28517f6898367f05a480920 | p8@INHBE |
| 1.3e-19 | FFCP PHASE2:Hg19::chr12:57849012..57849017,+#_86e6e7bbc28517f6898367f05a480920 | p8@INHBE |
| 2.71e-19 | FFCP PHASE2:Hg19::chr3:125635500..125635514,+#_10bab73d6020f3cc0403f5ecc0123292 | p1@ENST00000485843 |
| 2.71e-19 | FFCP PHASE1:Hg19::chr3:125635500..125635514,+#_10bab73d6020f3cc0403f5ecc0123292 | p1@ENST00000485843 |
| 3.25e-19 | FFCP PHASE1:Hg19::chr3:138666029..138666038,-#_300db9685155ad8823396871a8be6d62 | p8@FOXL2 |
| 3.25e-19 | FFCP PHASE2:Hg19::chr3:138666029..138666038,-#_300db9685155ad8823396871a8be6d62 | p8@FOXL2 |
| 6.23e-18 | FFCP PHASE2:Hg19::chr18:47918735..47918738,+#_01027f41f86bc5a73a5ab767ef725329 | p@chr18:47918735..47918738, + |
| 6.23e-18 | FFCP PHASE1:Hg19::chr18:47918735..47918738,+#_01027f41f86bc5a73a5ab767ef725329 | p@chr18:47918735..47918738, + |
| 1.03e-17 | FFCP PHASE2:Hg19::chr2:189387474..189387512,+#_44d3617521540a91a147c13f6594366e | p11@GULP1 |
| 1.03e-17 | FFCP PHASE1:Hg19::chr2:189387474..189387512,+#_44d3617521540a91a147c13f6594366e | p11@GULP1 |
| 1.7e-17 | FFCP PHASE2:Hg19::chr3:138666453..138666470,+#_d4aea6af166d49bd4a68e511e26a04ac | p4@C3orf72 |
| 1.7e-17 | FFCP PHASE1:Hg19::chr3:138666453..138666470,+#_d4aea6af166d49bd4a68e511e26a04ac | p4@C3orf72 |
| 8.86e-17 | FFCP PHASE1:Hg19::chr11:35496175..35496178,-#_171df253f748c504d2c9000d47ec58a9 | p@chr11:35496175..35496178, - |
| 8.86e-17 | FFCP PHASE2:Hg19::chr11:35496175..35496178,-#_171df253f748c504d2c9000d47ec58a9 | p@chr11:35496175..35496178, - |
| 1.93e-16 | FFCP PHASE2:Hg19::chr6:50786479..50786490,+#_228c3bb11906c94471f86b4cd15caf9a | p6@TFAP2B |
| 1.93e-16 | FFCP PHASE1:Hg19::chr6:50786479..50786490,+#_228c3bb11906c94471f86b4cd15caf9a | p6@TFAP2B |
| 1.34e-15 | FFCP PHASE2:Hg19::chr6:50786631..50786635,+#_91449e779d719c9cb5ec5970fef8c48d | p11@TFAP2B |
| 1.34e-15 | FFCP PHASE1:Hg19::chr6:50786631..50786635,+#_91449e779d719c9cb5ec5970fef8c48d | p11@TFAP2B |
| 2.38e-15 | FFCP PHASE2:Hg19::chr1:241576976..241576987,+#_efdce0c92bee21c3d052a3796d412557 | p@chr1:241576976..241576987, + |
| 2.38e-15 | FFCP PHASE1:Hg19::chr1:241576976..241576987,+#_efdce0c92bee21c3d052a3796d412557 | p@chr1:241576976..241576987, + |
| 4.73e-15 | FFCP PHASE2:Hg19::chr6:56013734..56013753,-#_dec69ff86828feda24c2a48caeb2cd71 | p@chr6:56013734..56013753, - |
| 4.73e-15 | FFCP PHASE1:Hg19::chr6:56013734..56013753,-#_dec69ff86828feda24c2a48caeb2cd71 | p@chr6:56013734..56013753, - |
| 7.55e-14 | FFCP PHASE2:Hg19::chr1:110625257..110625270,+#_aeac5f847b71a2c3aff1d40749de7891 | p2@ENST00000554808 |
| 7.55e-14 | FFCP PHASE1:Hg19::chr1:110625257..110625270,+#_aeac5f847b71a2c3aff1d40749de7891 | p2@ENST00000554808 |
| 8.58e-14 | FFCP PHASE2:Hg19::chr6:50789737..50789746,+#_fc7d8a75640f4ac9385a0a3d1b9e6814 | p10@TFAP2B |
| 8.58e-14 | FFCP PHASE1:Hg19::chr6:50789737..50789746,+#_fc7d8a75640f4ac9385a0a3d1b9e6814 | p10@TFAP2B |
| 3.08e-12 | FFCP PHASE2:Hg19::chrX:19688455..19688469,-#_91c9e67d593cc712aaf1b64c97c2463b | p21@SH3KBP1 |
| 3.08e-12 | FFCP PHASE1:Hg19::chrX:19688455..19688469,-#_91c9e67d593cc712aaf1b64c97c2463b | p21@SH3KBP1 |
| 7.76e-12 | FFCP PHASE2:Hg19::chr19:47747535..47747555,-#_1f64ed49b02d53e9c5c6284056db922e | p@chr19:47747535..47747555, - |
| 7.76e-12 | FFCP PHASE1:Hg19::chr19:47747535..47747555,-#_1f64ed49b02d53e9c5c6284056db922e | p@chr19:47747535..47747555, - |
| 1.32e-11 | FFCP PHASE2:Hg19::chr15:71568153..71568160,+#_ce2a1127bc52dbd69909f438c5dd9ddc | p1@BC008840 |
| 1.32e-11 | FFCP PHASE2:Hg19::chr3:138665790..138665809,-#_ce2a1127bc52dbd69909f438c5dd9ddc | p4@FOXL2 |
| 1.32e-11 | FFCP PHASE1:Hg19::chr15:71568153..71568160,+#_ce2a1127bc52dbd69909f438c5dd9ddc | p1@BC008840 |
| 1.32e-11 | FFCP PHASE1:Hg19::chr3:138665790..138665809,-#_ce2a1127bc52dbd69909f438c5dd9ddc | p4@FOXL2 |
| 4.44e-11 | FFCP PHASE2:Hg19::chr16:28841378..28841383,+#_7d702bfbc7afee2132486da9220ebf0b | p@chr16:28841378..28841383, + |
| 4.44e-11 | FFCP PHASE1:Hg19::chr16:28841378..28841383,+#_7d702bfbc7afee2132486da9220ebf0b | p@chr16:28841378..28841383, + |
| 4.58e-11 | FFCP PHASE1:Hg19::chr13:23734436..23734448,+#_f70908af8b74c60b9d7c54e413a2a8e0 | p@chr13:23734436..23734448, + |
| 4.58e-11 | FFCP PHASE2:Hg19::chr13:23734436..23734448,+#_f70908af8b74c60b9d7c54e413a2a8e0 | p@chr13:23734436..23734448, + |
| 6.14e-11 | FFCP PHASE2:Hg19::chr1:120255269..120255282,-#_4c8f193395de0a29b2d80538160af90d | p@chr1:120255269..120255282, - |
| 6.14e-11 | FFCP PHASE1:Hg19::chr1:120255269..120255282,-#_4c8f193395de0a29b2d80538160af90d | p@chr1:120255269..120255282, - |
| 9.84e-11 | FFCP PHASE2:Hg19::chr19:5212096..5212107,-#_0e35b2020228f4e9e3d0bedf56bf4f18 | p@chr19:5212096..5212107, - |
| 9.84e-11 | FFCP PHASE1:Hg19::chr19:5212096..5212107,-#_0e35b2020228f4e9e3d0bedf56bf4f18 | p@chr19:5212096..5212107, - |
| 5.31e-10 | FFCP PHASE2:Hg19::chr6:50787466..50787500,+#_b4cb27fd7035e032acf951e183fc3fce | p@chr6:50787466..50787500, + |
| 5.31e-10 | FFCP PHASE1:Hg19::chr6:50787466..50787500,+#_b4cb27fd7035e032acf951e183fc3fce | p@chr6:50787466..50787500, + |
| 6.31e-10 | FFCP PHASE2:Hg19::chr20:25176603..25176614,+#_f13cffa8cdb28f56e1029d833056cec0 | p@chr20:25176603..25176614, + |
| 6.31e-10 | FFCP PHASE1:Hg19::chr20:25176603..25176614,+#_f13cffa8cdb28f56e1029d833056cec0 | p@chr20:25176603..25176614, + |
| 6.91e-10 | FFCP PHASE2:Hg19::chr6:78171774..78171792,+#_e0aa6fbe3da5354b7d1f7c8d5b7e549d | p@chr6:78171774..78171792, + |
| 6.91e-10 | FFCP PHASE1:Hg19::chr6:78171774..78171792,+#_e0aa6fbe3da5354b7d1f7c8d5b7e549d | p@chr6:78171774..78171792, + |
| 8.17e-10 | FFCP PHASE2:Hg19::chr4:141188914..141188930,+#_10d77ea1e7f97fe29f6a5e6f76c9488c | p@chr4:141188914..141188930, + |
| 8.17e-10 | FFCP PHASE1:Hg19::chr4:141188914..141188930,+#_10d77ea1e7f97fe29f6a5e6f76c9488c | p@chr4:141188914..141188930, + |
| 1.15e-9 | FFCP PHASE1:Hg19::chr22:50984240..50984250,+#_ee0c7af88a6462a87b9e10f5a40d8ebb | p@chr22:50984240..50984250, + |
| 1.15e-9 | FFCP PHASE2:Hg19::chr17:21454398..21454417,-#_ee0c7af88a6462a87b9e10f5a40d8ebb | p4@C17orf51 |
| 1.15e-9 | FFCP PHASE2:Hg19::chr22:50984240..50984250,+#_ee0c7af88a6462a87b9e10f5a40d8ebb | p@chr22:50984240..50984250, + |
| 1.15e-9 | FFCP PHASE1:Hg19::chr17:21454398..21454417,-#_ee0c7af88a6462a87b9e10f5a40d8ebb | p4@C17orf51 |
| 1.21e-9 | FFCP PHASE2:Hg19::chr1:27269555..27269558,+#_15361175c78505cd949687355b4af978 | p@chr1:27269555..27269558, + |
| 1.21e-9 | FFCP PHASE1:Hg19::chr1:27269555..27269558,+#_15361175c78505cd949687355b4af978 | p@chr1:27269555..27269558, + |
| 1.48e-9 | FFCP PHASE2:Hg19::chr11:122073019..122073034,-#_cefe86ab316b4a1ddc21889b55cc9e8d | p@chr11:122073019..122073034, - |
| 1.48e-9 | FFCP PHASE1:Hg19::chr11:122073019..122073034,-#_cefe86ab316b4a1ddc21889b55cc9e8d | p@chr11:122073019..122073034, - |
| 2.82e-9 | FFCP PHASE2:Hg19::chr1:89150418..89150432,-#_8200b0bb7918b3d2d5b9110ff6008c49 | p@chr1:89150418..89150432, - |
| 2.82e-9 | FFCP PHASE1:Hg19::chr1:89150418..89150432,-#_8200b0bb7918b3d2d5b9110ff6008c49 | p@chr1:89150418..89150432, - |
| 3.53e-9 | FFCP PHASE1:Hg19::chr10:33624581..33624593,-#_ed8f9330953cf48a8f67c33d0a0a6d51 | p@chr10:33624581..33624593, - |
| 3.53e-9 | FFCP PHASE2:Hg19::chr10:33624581..33624593,-#_ed8f9330953cf48a8f67c33d0a0a6d51 | p@chr10:33624581..33624593, - |
| 3.58e-9 | FFCP PHASE2:Hg19::chr3:65561104..65561130,-#_bc8019525b84e93ef89aee8435e531b2 | p@chr3:65561104..65561130, - |
| 3.58e-9 | FFCP PHASE1:Hg19::chr3:65561104..65561130,-#_bc8019525b84e93ef89aee8435e531b2 | p@chr3:65561104..65561130, - |
| 3.58e-9 | FFCP PHASE2:Hg19::chr19:47747509..47747525,-#_bc8019525b84e93ef89aee8435e531b2 | p@chr19:47747509..47747525, - |
| 3.58e-9 | FFCP PHASE1:Hg19::chr19:47747509..47747525,-#_bc8019525b84e93ef89aee8435e531b2 | p@chr19:47747509..47747525, - |
| 5.28e-9 | FFCP PHASE2:Hg19::chr14:73132255..73132270,+#_f6bba3e001cd2e3b224e2dabb77f8a5c | p@chr14:73132255..73132270, + |
| 5.28e-9 | FFCP PHASE1:Hg19::chr14:73132255..73132270,+#_f6bba3e001cd2e3b224e2dabb77f8a5c | p@chr14:73132255..73132270, + |
| 5.31e-9 | FFCP PHASE2:Hg19::chr17:46993346..46993356,+#_cf6a6b36e4d2bea4ffbf4e4a3925b781 | p9@UBE2Z |
| 5.31e-9 | FFCP PHASE1:Hg19::chr17:46993346..46993356,+#_cf6a6b36e4d2bea4ffbf4e4a3925b781 | p9@UBE2Z |
| 1.22e-8 | FFCP PHASE1:Hg19::chr12:110338376..110338395,+#_094e0cb47d0b42f1b12c4573b37fe7d2 | p2@TCHP |
| 1.22e-8 | FFCP PHASE2:Hg19::chr12:110338376..110338395,+#_094e0cb47d0b42f1b12c4573b37fe7d2 | p2@TCHP |
| 1.42e-8 | FFCP PHASE2:Hg19::chr8:41655816..41655828,-#_12887243a411d4611e85f307abac8ca0 | p@chr8:41655816..41655828, - |
| 1.42e-8 | FFCP PHASE1:Hg19::chr8:41655816..41655828,-#_12887243a411d4611e85f307abac8ca0 | p@chr8:41655816..41655828, - |
| 1.65e-8 | FFCP PHASE1:Hg19::chr12:114299021..114299036,+#_8e6a5a7824cd57ffa4df2e510c42c46e | p@chr12:114299021..114299036, + |
| 1.65e-8 | FFCP PHASE2:Hg19::chr12:114299021..114299036,+#_8e6a5a7824cd57ffa4df2e510c42c46e | p@chr12:114299021..114299036, + |
| 1.71e-8 | FFCP PHASE2:Hg19::chr17:47075023..47075032,+#_3944602ae4b3811f33c0be719361596d | p8@IGF2BP1 |
| 1.71e-8 | FFCP PHASE1:Hg19::chr17:47075023..47075032,+#_3944602ae4b3811f33c0be719361596d | p8@IGF2BP1 |
| 2.69e-8 | FFCP PHASE1:Hg19::chr11:108800197..108800208,+#_f73ce714c196542b6d040d0b4cd48d7c | p6@DDX10 |
| 2.69e-8 | FFCP PHASE2:Hg19::chr11:108800197..108800208,+#_f73ce714c196542b6d040d0b4cd48d7c | p6@DDX10 |
| 2.89e-8 | FFCP PHASE2:Hg19::chr17:43226707..43226725,+#_a628a8f831868f5d1ed6f4810f127b32 | p2@CU675415 |
| 2.89e-8 | FFCP PHASE1:Hg19::chr17:43226707..43226725,+#_a628a8f831868f5d1ed6f4810f127b32 | p2@CU675415 |
