CL:0002351: Difference between revisions
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{{CL | {{CL | ||
| | |alt_id= | ||
|comment= | |comment= | ||
|created_by=tmeehan | |created_by=tmeehan | ||
| | |def="A multi-fate stem cell that is able to differentiate into the pancreas alpha, beta and delta endocrine cells. This cell type expresses neurogenin-3 and��Isl-1." [GOC:tfm, PMID:20025937, PMID:20217494] | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
|disjoint_from= | |||
|has_quality= | |has_quality= | ||
|id=CL:0002351 | |||
|is_a=CL:0000048 | |||
|is_obsolete= | |||
|located_in= | |located_in= | ||
|name=progenitor cell of endocrine pancreas | |||
|namespace=FANTOM | |||
|obo_creation_date=2010-09-21T04:41:06Z | |||
|part_of= | |part_of= | ||
|preceded_by= | |preceded_by= | ||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl;;IAO:0000412 http://purl.obolibrary.org/obo/efo.owl | |||
|subset= | |||
|synonym="pancreatic endocrine progenitor" EXACT [];;"pancreatic islet progenitor cell" EXACT [] | |||
|union_of= | |||
|xref= | |||
}} | }} | ||
Latest revision as of 16:42, 12 September 2014
| Name: | progenitor cell of endocrine pancreas |
|---|---|
| Namespace: | FANTOM |
| Definition: | "A multi-fate stem cell that is able to differentiate into the pancreas alpha, beta and delta endocrine cells. This cell type expresses neurogenin-3 and��Isl-1." [GOC:tfm, PMID:20025937, PMID:20217494] |
| Synonyms: |
"pancreatic endocrine progenitor" EXACT [] "pancreatic islet progenitor cell" EXACT [] |
| Created by: | tmeehan |
| Creation date: | 2010-09-21T04:41:06Z |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | CL:0000048(multi fate stem cell) |
|---|
Children
| develops from: | CL:0000169 (type B pancreatic cell),CL:0000173 (pancreatic D cell) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002351 (progenitor cell of endocrine pancreas), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 5.42e-195 | FFCP PHASE1:Hg19::chr10:120200137..120200154,+#_78bd1c6af8ee931eceea75edb8a7713a | p@chr10:120200137..120200154, + |
| 5.42e-195 | FFCP PHASE2:Hg19::chr9:96678236..96678246,-#_78bd1c6af8ee931eceea75edb8a7713a | p@chr9:96678236..96678246, - |
| 5.42e-195 | FFCP PHASE2:Hg19::chr20:20173664..20173680,+#_78bd1c6af8ee931eceea75edb8a7713a | p@chr20:20173664..20173680, + |
| 5.42e-195 | FFCP PHASE2:Hg19::chr9:77257468..77257474,-#_78bd1c6af8ee931eceea75edb8a7713a | p@chr9:77257468..77257474, - |
| 5.42e-195 | FFCP PHASE1:Hg19::chr6:50692244..50692251,+#_78bd1c6af8ee931eceea75edb8a7713a | p@chr6:50692244..50692251, + |
| 5.42e-195 | FFCP PHASE1:Hg19::chr1:193232144..193232147,+#_78bd1c6af8ee931eceea75edb8a7713a | p@chr1:193232144..193232147, + |
| 5.42e-195 | FFCP PHASE1:Hg19::chr20:20173664..20173680,+#_78bd1c6af8ee931eceea75edb8a7713a | p@chr20:20173664..20173680, + |
| 5.42e-195 | FFCP PHASE1:Hg19::chr9:96678236..96678246,-#_78bd1c6af8ee931eceea75edb8a7713a | p@chr9:96678236..96678246, - |
| 5.42e-195 | FFCP PHASE1:Hg19::chr1:193186161..193186169,-#_78bd1c6af8ee931eceea75edb8a7713a | p@chr1:193186161..193186169, - |
| 5.42e-195 | FFCP PHASE2:Hg19::chr1:193232079..193232084,+#_78bd1c6af8ee931eceea75edb8a7713a | p@chr1:193232079..193232084, + |
| 5.42e-195 | FFCP PHASE1:Hg19::chr9:77257468..77257474,-#_78bd1c6af8ee931eceea75edb8a7713a | p@chr9:77257468..77257474, - |
| 5.42e-195 | FFCP PHASE1:Hg19::chr12:70464665..70464668,+#_78bd1c6af8ee931eceea75edb8a7713a | p@chr12:70464665..70464668, + |
| 5.42e-195 | FFCP PHASE2:Hg19::chr12:70464665..70464668,+#_78bd1c6af8ee931eceea75edb8a7713a | p@chr12:70464665..70464668, + |
| 5.42e-195 | FFCP PHASE1:Hg19::chr18:56815879..56815901,+#_78bd1c6af8ee931eceea75edb8a7713a | p@chr18:56815879..56815901, + |
| 5.42e-195 | FFCP PHASE2:Hg19::chr18:56815879..56815901,+#_78bd1c6af8ee931eceea75edb8a7713a | p@chr18:56815879..56815901, + |
| 5.42e-195 | FFCP PHASE1:Hg19::chr1:193232079..193232084,+#_78bd1c6af8ee931eceea75edb8a7713a | p@chr1:193232079..193232084, + |
| 5.42e-195 | FFCP PHASE2:Hg19::chr6:50692244..50692251,+#_78bd1c6af8ee931eceea75edb8a7713a | p@chr6:50692244..50692251, + |
| 5.42e-195 | FFCP PHASE2:Hg19::chr1:193232144..193232147,+#_78bd1c6af8ee931eceea75edb8a7713a | p@chr1:193232144..193232147, + |
| 5.42e-195 | FFCP PHASE2:Hg19::chr10:120200137..120200154,+#_78bd1c6af8ee931eceea75edb8a7713a | p@chr10:120200137..120200154, + |
| 5.42e-195 | FFCP PHASE2:Hg19::chr1:193186161..193186169,-#_78bd1c6af8ee931eceea75edb8a7713a | p@chr1:193186161..193186169, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr6:161970049..161970057,-#_c07c2b762403a71a84dd7174e0436d24 | p3@GU361471 |
| 9.37e-99 | FFCP PHASE1:Hg19::chr1:193232096..193232117,+#_c07c2b762403a71a84dd7174e0436d24 | p@chr1:193232096..193232117, + |
| 9.37e-99 | FFCP PHASE2:Hg19::chr12:70464593..70464598,+#_c07c2b762403a71a84dd7174e0436d24 | p@chr12:70464593..70464598, + |
| 9.37e-99 | FFCP PHASE1:Hg19::chr12:70464593..70464598,+#_c07c2b762403a71a84dd7174e0436d24 | p@chr12:70464593..70464598, + |
| 9.37e-99 | FFCP PHASE1:Hg19::chr6:154858221..154858224,-#_c07c2b762403a71a84dd7174e0436d24 | p@chr6:154858221..154858224, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr4:173014804..173014812,+#_c07c2b762403a71a84dd7174e0436d24 | p@chr4:173014804..173014812, + |
| 9.37e-99 | FFCP PHASE2:Hg19::chr6:154858237..154858245,-#_c07c2b762403a71a84dd7174e0436d24 | p@chr6:154858237..154858245, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr1:193186195..193186210,-#_c07c2b762403a71a84dd7174e0436d24 | p@chr1:193186195..193186210, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr9:77257424..77257435,-#_c07c2b762403a71a84dd7174e0436d24 | p@chr9:77257424..77257435, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr6:161970049..161970057,-#_c07c2b762403a71a84dd7174e0436d24 | p3@GU361471 |
| 9.37e-99 | FFCP PHASE2:Hg19::chr4:59982412..59982425,+#_c07c2b762403a71a84dd7174e0436d24 | p@chr4:59982412..59982425, + |
| 9.37e-99 | FFCP PHASE1:Hg19::chr6:154858237..154858245,-#_c07c2b762403a71a84dd7174e0436d24 | p@chr6:154858237..154858245, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr4:59982412..59982425,+#_c07c2b762403a71a84dd7174e0436d24 | p@chr4:59982412..59982425, + |
| 9.37e-99 | FFCP PHASE2:Hg19::chr18:56813724..56813731,+#_c07c2b762403a71a84dd7174e0436d24 | p@chr18:56813724..56813731, + |
| 9.37e-99 | FFCP PHASE1:Hg19::chr1:193186195..193186210,-#_c07c2b762403a71a84dd7174e0436d24 | p@chr1:193186195..193186210, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr18:56813724..56813731,+#_c07c2b762403a71a84dd7174e0436d24 | p@chr18:56813724..56813731, + |
| 9.37e-99 | FFCP PHASE2:Hg19::chr4:139208173..139208199,-#_c07c2b762403a71a84dd7174e0436d24 | p@chr4:139208173..139208199, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr1:193232096..193232117,+#_c07c2b762403a71a84dd7174e0436d24 | p@chr1:193232096..193232117, + |
| 9.37e-99 | FFCP PHASE1:Hg19::chr12:70464675..70464680,+#_c07c2b762403a71a84dd7174e0436d24 | p@chr12:70464675..70464680, + |
| 9.37e-99 | FFCP PHASE2:Hg19::chr12:70464675..70464680,+#_c07c2b762403a71a84dd7174e0436d24 | p@chr12:70464675..70464680, + |
| 9.37e-99 | FFCP PHASE1:Hg19::chr4:139208173..139208199,-#_c07c2b762403a71a84dd7174e0436d24 | p@chr4:139208173..139208199, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr18:7955271..7955280,+#_c07c2b762403a71a84dd7174e0436d24 | p@chr18:7955271..7955280, + |
| 9.37e-99 | FFCP PHASE2:Hg19::chr18:7955271..7955280,+#_c07c2b762403a71a84dd7174e0436d24 | p@chr18:7955271..7955280, + |
| 9.37e-99 | FFCP PHASE2:Hg19::chr6:154858221..154858224,-#_c07c2b762403a71a84dd7174e0436d24 | p@chr6:154858221..154858224, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr4:173014804..173014812,+#_c07c2b762403a71a84dd7174e0436d24 | p@chr4:173014804..173014812, + |
| 9.37e-99 | FFCP PHASE2:Hg19::chr9:77257424..77257435,-#_c07c2b762403a71a84dd7174e0436d24 | p@chr9:77257424..77257435, - |
| 2.55e-98 | FFCP PHASE2:Hg19::chr6:154858334..154858342,-#_971806b9d3e4e4540c43782fcad14be8 | p@chr6:154858334..154858342, - |
| 2.55e-98 | FFCP PHASE1:Hg19::chr13:93508642..93508652,-#_971806b9d3e4e4540c43782fcad14be8 | p@chr13:93508642..93508652, - |
| 2.55e-98 | FFCP PHASE2:Hg19::chr13:93508642..93508652,-#_971806b9d3e4e4540c43782fcad14be8 | p@chr13:93508642..93508652, - |
| 2.55e-98 | FFCP PHASE2:Hg19::chr6:132980338..132980346,-#_971806b9d3e4e4540c43782fcad14be8 | p@chr6:132980338..132980346, - |
| 2.55e-98 | FFCP PHASE1:Hg19::chr6:154858334..154858342,-#_971806b9d3e4e4540c43782fcad14be8 | p@chr6:154858334..154858342, - |
| 2.55e-98 | FFCP PHASE2:Hg19::chr1:110661599..110661609,-#_971806b9d3e4e4540c43782fcad14be8 | p@chr1:110661599..110661609, - |
| 2.55e-98 | FFCP PHASE1:Hg19::chr6:132980338..132980346,-#_971806b9d3e4e4540c43782fcad14be8 | p@chr6:132980338..132980346, - |
| 2.55e-98 | FFCP PHASE1:Hg19::chr1:110661599..110661609,-#_971806b9d3e4e4540c43782fcad14be8 | p@chr1:110661599..110661609, - |
| 2.55e-98 | FFCP PHASE1:Hg19::chr18:56816249..56816258,+#_971806b9d3e4e4540c43782fcad14be8 | p@chr18:56816249..56816258, + |
| 2.55e-98 | FFCP PHASE2:Hg19::chr18:56816249..56816258,+#_971806b9d3e4e4540c43782fcad14be8 | p@chr18:56816249..56816258, + |
| 1.23e-66 | FFCP PHASE1:Hg19::chr18:56815158..56815162,+#_9923fdc9693bb28cfd976c3a064f3322 | p@chr18:56815158..56815162, + |
| 1.23e-66 | FFCP PHASE2:Hg19::chr18:56815158..56815162,+#_9923fdc9693bb28cfd976c3a064f3322 | p@chr18:56815158..56815162, + |
| 1.23e-66 | FFCP PHASE2:Hg19::chr12:128108552..128108561,+#_9923fdc9693bb28cfd976c3a064f3322 | p1@ENST00000537470 |
| 1.23e-66 | FFCP PHASE1:Hg19::chr12:128108552..128108561,+#_9923fdc9693bb28cfd976c3a064f3322 | p1@ENST00000537470 |
| 1.23e-66 | FFCP PHASE1:Hg19::chr1:110678110..110678115,+#_9923fdc9693bb28cfd976c3a064f3322 | p@chr1:110678110..110678115, + |
| 1.23e-66 | FFCP PHASE1:Hg19::chr12:127385138..127385144,-#_9923fdc9693bb28cfd976c3a064f3322 | p@chr12:127385138..127385144, - |
| 1.23e-66 | FFCP PHASE2:Hg19::chr12:127385138..127385144,-#_9923fdc9693bb28cfd976c3a064f3322 | p@chr12:127385138..127385144, - |
| 1.23e-66 | FFCP PHASE1:Hg19::chr18:7955176..7955183,+#_9923fdc9693bb28cfd976c3a064f3322 | p@chr18:7955176..7955183, + |
| 1.23e-66 | FFCP PHASE2:Hg19::chr18:7955176..7955183,+#_9923fdc9693bb28cfd976c3a064f3322 | p@chr18:7955176..7955183, + |
| 1.23e-66 | FFCP PHASE1:Hg19::chr12:70464652..70464662,+#_9923fdc9693bb28cfd976c3a064f3322 | p@chr12:70464652..70464662, + |
| 1.23e-66 | FFCP PHASE2:Hg19::chr12:70464652..70464662,+#_9923fdc9693bb28cfd976c3a064f3322 | p@chr12:70464652..70464662, + |
| 1.23e-66 | FFCP PHASE2:Hg19::chr1:110678228..110678236,+#_9923fdc9693bb28cfd976c3a064f3322 | p@chr1:110678228..110678236, + |
| 1.23e-66 | FFCP PHASE1:Hg19::chr1:110678228..110678236,+#_9923fdc9693bb28cfd976c3a064f3322 | p@chr1:110678228..110678236, + |
| 1.23e-66 | FFCP PHASE2:Hg19::chr19:7570269..7570273,+#_9923fdc9693bb28cfd976c3a064f3322 | p13@C19orf45 |
| 1.23e-66 | FFCP PHASE2:Hg19::chr9:77257683..77257703,+#_9923fdc9693bb28cfd976c3a064f3322 | p@chr9:77257683..77257703, + |
| 1.23e-66 | FFCP PHASE1:Hg19::chr19:7570269..7570273,+#_9923fdc9693bb28cfd976c3a064f3322 | p13@C19orf45 |
| 1.23e-66 | FFCP PHASE2:Hg19::chr1:110678110..110678115,+#_9923fdc9693bb28cfd976c3a064f3322 | p@chr1:110678110..110678115, + |
| 1.23e-66 | FFCP PHASE1:Hg19::chr9:77257683..77257703,+#_9923fdc9693bb28cfd976c3a064f3322 | p@chr9:77257683..77257703, + |
| 2.39e-66 | FFCP PHASE1:Hg19::chr18:56816267..56816276,+#_e114b7254c18eaeec7c52830af89c9df | p@chr18:56816267..56816276, + |
| 2.39e-66 | FFCP PHASE2:Hg19::chr18:56816267..56816276,+#_e114b7254c18eaeec7c52830af89c9df | p@chr18:56816267..56816276, + |
| 2.39e-66 | FFCP PHASE2:Hg19::chr2:159855059..159855068,-#_e114b7254c18eaeec7c52830af89c9df | p@chr2:159855059..159855068, - |
| 2.39e-66 | FFCP PHASE2:Hg19::chr4:3310694..3310716,-#_e114b7254c18eaeec7c52830af89c9df | p@chr4:3310694..3310716, - |
| 2.39e-66 | FFCP PHASE2:Hg19::chr5:77683792..77683799,+#_e114b7254c18eaeec7c52830af89c9df | p@chr5:77683792..77683799, + |
| 2.39e-66 | FFCP PHASE2:Hg19::chr5:104246731..104246738,-#_e114b7254c18eaeec7c52830af89c9df | p3@ENST00000524336 |
| 2.39e-66 | FFCP PHASE1:Hg19::chr2:159855059..159855068,-#_e114b7254c18eaeec7c52830af89c9df | p@chr2:159855059..159855068, - |
| 2.39e-66 | FFCP PHASE2:Hg19::chr1:165198157..165198181,-#_e114b7254c18eaeec7c52830af89c9df | p@chr1:165198157..165198181, - |
| 2.39e-66 | FFCP PHASE1:Hg19::chr4:3310694..3310716,-#_e114b7254c18eaeec7c52830af89c9df | p@chr4:3310694..3310716, - |
| 2.39e-66 | FFCP PHASE1:Hg19::chr5:77683792..77683799,+#_e114b7254c18eaeec7c52830af89c9df | p@chr5:77683792..77683799, + |
| 2.39e-66 | FFCP PHASE2:Hg19::chr7:120381641..120381650,+#_e114b7254c18eaeec7c52830af89c9df | p@chr7:120381641..120381650, + |
| 2.39e-66 | FFCP PHASE1:Hg19::chr5:104246731..104246738,-#_e114b7254c18eaeec7c52830af89c9df | p3@ENST00000524336 |
| 2.39e-66 | FFCP PHASE1:Hg19::chr13:93587956..93587973,+#_e114b7254c18eaeec7c52830af89c9df | p@chr13:93587956..93587973, + |
| 2.39e-66 | FFCP PHASE2:Hg19::chr13:93587956..93587973,+#_e114b7254c18eaeec7c52830af89c9df | p@chr13:93587956..93587973, + |
| 2.39e-66 | FFCP PHASE2:Hg19::chr15:92459318..92459327,+#_e114b7254c18eaeec7c52830af89c9df | p@chr15:92459318..92459327, + |
| 2.39e-66 | FFCP PHASE2:Hg19::chr12:128077388..128077416,+#_e114b7254c18eaeec7c52830af89c9df | p@chr12:128077388..128077416, + |
| 2.39e-66 | FFCP PHASE1:Hg19::chr12:128077388..128077416,+#_e114b7254c18eaeec7c52830af89c9df | p@chr12:128077388..128077416, + |
| 2.39e-66 | FFCP PHASE1:Hg19::chr1:165198157..165198181,-#_e114b7254c18eaeec7c52830af89c9df | p@chr1:165198157..165198181, - |
| 2.39e-66 | FFCP PHASE1:Hg19::chr15:92459318..92459327,+#_e114b7254c18eaeec7c52830af89c9df | p@chr15:92459318..92459327, + |
| 2.39e-66 | FFCP PHASE1:Hg19::chr7:120381641..120381650,+#_e114b7254c18eaeec7c52830af89c9df | p@chr7:120381641..120381650, + |
| 4.66e-66 | FFCP PHASE1:Hg19::chr20:11077086..11077098,+#_d2e3e0fcc26c294a706dbe0c05a0b5e8 | p@chr20:11077086..11077098, + |
| 4.66e-66 | FFCP PHASE1:Hg19::chr14:101165430..101165451,-#_d2e3e0fcc26c294a706dbe0c05a0b5e8 | p@chr14:101165430..101165451, - |
| 4.66e-66 | FFCP PHASE2:Hg19::chr14:101165430..101165451,-#_d2e3e0fcc26c294a706dbe0c05a0b5e8 | p@chr14:101165430..101165451, - |
| 4.66e-66 | FFCP PHASE1:Hg19::chr7:100807523..100807543,+#_d2e3e0fcc26c294a706dbe0c05a0b5e8 | p@chr7:100807523..100807543, + |
| 4.66e-66 | FFCP PHASE2:Hg19::chr7:120778453..120778458,-#_d2e3e0fcc26c294a706dbe0c05a0b5e8 | p@chr7:120778453..120778458, - |
| 4.66e-66 | FFCP PHASE2:Hg19::chr7:100808087..100808104,-#_d2e3e0fcc26c294a706dbe0c05a0b5e8 | p@chr7:100808087..100808104, - |
