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{{CL
{{CL
|id=CL:0002334
|alt_id=
|name=preadipocyte
|namespace=efo
|def="An undifferentiatedﾂ�fibroblastﾂ�that can be stimulated to form a fat cell." [GOC:tfm, PMID:18793119]
|xref=BTO:0001107
|is_a=CL:0000057;;EFO:0000324
|synonym=
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=tmeehan
|created_by=tmeehan
|obo_creation_date=2010-09-20T02:31:53Z
|def="An undifferentiated��fibroblast��that can be stimulated to form a fat cell." [GOC:tfm, PMID:18793119]
|subset=
|adjacent_to=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=CL:0002334
|is_a=CL:0000057
|is_obsolete=
|located_in=
|located_in=
|name=preadipocyte
|namespace=FANTOM
|obo_creation_date=2010-09-20T02:31:53Z
|part_of=
|part_of=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl;;IAO:0000412 http://purl.obolibrary.org/obo/efo.obo.owl
|is_obsolete=
|preceded_by=
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl;;IAO:0000412 http://purl.obolibrary.org/obo/efo.owl
|subset=
|synonym=
|union_of=
|xref=BTO:0001107
}}
}}

Latest revision as of 16:42, 12 September 2014

Name:preadipocyte
Namespace:FANTOM
Definition:"An undifferentiated��fibroblast��that can be stimulated to form a fat cell." [GOC:tfm, PMID:18793119]
Xrefs:
links:
BTO:0001107
Created by:tmeehan
Creation date:2010-09-20T02:31:53Z


Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:CL:0000057(fibroblast)



Children


is a:CL:0002578 (mesenteric preadipocyte),CL:0002579 (omentum preadipocyte),CL:0002580 (preadipocyte of the breast),CL:0002581 (perirenal preadipocyte),CL:0002582 (visceral preadipocyte),CL:0002583 (subcutaneous preadipocyte)
derives from:FF:0000137 (human preadipocyte sample)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.

Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002334 (preadipocyte), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
2.69e-73FFCP PHASE1:Hg19::chr4:112437251..112437278,+#_18fe73f75db059bcb94e906742398ea0p@chr4:112437251..112437278, +
2.69e-73FFCP PHASE2:Hg19::chr4:112437251..112437278,+#_18fe73f75db059bcb94e906742398ea0p@chr4:112437251..112437278, +
5.94e-66FFCP PHASE2:Hg19::chr4:112437339..112437350,+#_e6965deb2db08f1ed168f1ae5a74b21fp@chr4:112437339..112437350, +
5.94e-66FFCP PHASE1:Hg19::chr4:112437339..112437350,+#_e6965deb2db08f1ed168f1ae5a74b21fp@chr4:112437339..112437350, +
7.49e-62FFCP PHASE2:Hg19::chr6:35216360..35216374,+#_1ea16a47585d50797488a1d64efaf120p10@SCUBE3
7.49e-62FFCP PHASE1:Hg19::chr6:35216360..35216374,+#_1ea16a47585d50797488a1d64efaf120p10@SCUBE3
2.04e-57FFCP PHASE1:Hg19::chr2:191745264..191745275,+#_572e7623edc89cb466bb8061fe421c36p21@GLS
2.04e-57FFCP PHASE2:Hg19::chr2:191745264..191745275,+#_572e7623edc89cb466bb8061fe421c36p21@GLS
1.21e-50FFCP PHASE1:Hg19::chr15:81214436..81214445,+#_64c663cfcebc79a2ae60a74812481bcdp13@KIAA1199
1.21e-50FFCP PHASE2:Hg19::chr15:81214436..81214445,+#_64c663cfcebc79a2ae60a74812481bcdp13@KIAA1199
2.03e-50FFCP PHASE1:Hg19::chr10:105428632..105428639,-#_76a24a4a2934722b69abc9e9b60a2ab1p26@SH3PXD2A
2.03e-50FFCP PHASE2:Hg19::chr10:105428632..105428639,-#_76a24a4a2934722b69abc9e9b60a2ab1p26@SH3PXD2A
2.93e-50FFCP PHASE1:Hg19::chr6:35218350..35218364,+#_81d8d958f055c39a97ebff739f7dbad0p2@AK123742
2.93e-50FFCP PHASE2:Hg19::chr6:35218350..35218364,+#_81d8d958f055c39a97ebff739f7dbad0p2@AK123742
1.69e-49FFCP PHASE1:Hg19::chr15:81242191..81242201,+#_a6b914cb33fd49e78bf34314390cea20p19@KIAA1199
1.69e-49FFCP PHASE2:Hg19::chr15:81242191..81242201,+#_a6b914cb33fd49e78bf34314390cea20p19@KIAA1199
1.87e-48FFCP PHASE2:Hg19::chr6:35217101..35217114,+#_5651902789ca50bfbbf1e5aa54616defp@chr6:35217101..35217114, +
1.87e-48FFCP PHASE1:Hg19::chr6:35217101..35217114,+#_5651902789ca50bfbbf1e5aa54616defp@chr6:35217101..35217114, +
6.44e-45FFCP PHASE1:Hg19::chr7:40251315..40251325,-#_cf728cd88ee770e39676afa7b1919efep@chr7:40251315..40251325, -
6.44e-45FFCP PHASE2:Hg19::chr7:40251315..40251325,-#_cf728cd88ee770e39676afa7b1919efep@chr7:40251315..40251325, -
4.43e-44FFCP PHASE1:Hg19::chr20:61368258..61368275,+#_a80451159ee9d3827f801d28373d7809p@chr20:61368258..61368275, +
4.43e-44FFCP PHASE2:Hg19::chr20:61368258..61368275,+#_a80451159ee9d3827f801d28373d7809p@chr20:61368258..61368275, +
1.15e-42FFCP PHASE2:Hg19::chr15:81173239..81173250,+#_05d843e4d0fb18852016bfcf4ee6d54ap@chr15:81173239..81173250, +
1.15e-42FFCP PHASE1:Hg19::chr15:81173239..81173250,+#_05d843e4d0fb18852016bfcf4ee6d54ap@chr15:81173239..81173250, +
3.74e-42FFCP PHASE1:Hg19::chr6:35214004..35214032,+#_7c8d89a3bcf6abb30f4baeeb4067654ep@chr6:35214004..35214032, +
3.74e-42FFCP PHASE2:Hg19::chr6:35214004..35214032,+#_7c8d89a3bcf6abb30f4baeeb4067654ep@chr6:35214004..35214032, +
2.56e-41FFCP PHASE2:Hg19::chr6:169622388..169622400,-#_c3302daff1cee2f6abedab2df846f934p@chr6:169622388..169622400, -
2.56e-41FFCP PHASE1:Hg19::chr6:169622388..169622400,-#_c3302daff1cee2f6abedab2df846f934p@chr6:169622388..169622400, -
3.5e-40FFCP PHASE1:Hg19::chr12:8814772..8814786,-#_5e32f626e337c4ad070ba8aa43773f70p13@MFAP5
3.5e-40FFCP PHASE2:Hg19::chr12:8814772..8814786,-#_5e32f626e337c4ad070ba8aa43773f70p13@MFAP5
7.02e-40FFCP PHASE2:Hg19::chr6:35218158..35218175,+#_9f88b79e44ed8011959644a94fd7c0c3p@chr6:35218158..35218175, +
7.02e-40FFCP PHASE1:Hg19::chr6:35218158..35218175,+#_9f88b79e44ed8011959644a94fd7c0c3p@chr6:35218158..35218175, +
7.93e-40FFCP PHASE1:Hg19::chr19:18900031..18900054,+#_3482739636506258048d8a14d7c7e15cp@chr19:18900031..18900054, +
7.93e-40FFCP PHASE2:Hg19::chr19:18900031..18900054,+#_3482739636506258048d8a14d7c7e15cp@chr19:18900031..18900054, +
1.79e-39FFCP PHASE1:Hg19::chr19:18896512..18896527,-#_c4dac0ad78c3d7194ce7bcbe8ae8f71ep@chr19:18896512..18896527, -
1.79e-39FFCP PHASE2:Hg19::chr19:18896512..18896527,-#_c4dac0ad78c3d7194ce7bcbe8ae8f71ep@chr19:18896512..18896527, -
3.78e-39FFCP PHASE1:Hg19::chr19:18900893..18900901,-#_269035056cb0b3616a794ca6e8a2cd60p@chr19:18900893..18900901, -
3.78e-39FFCP PHASE2:Hg19::chr19:18900893..18900901,-#_269035056cb0b3616a794ca6e8a2cd60p@chr19:18900893..18900901, -
6.8e-39FFCP PHASE2:Hg19::chr14:74965436..74965448,-#_ca7430d4ea9eaf1c43446bab174df4bbp27@LTBP2
6.8e-39FFCP PHASE1:Hg19::chr14:74965436..74965448,-#_ca7430d4ea9eaf1c43446bab174df4bbp27@LTBP2
1.04e-38FFCP PHASE1:Hg19::chr15:81243109..81243120,+#_db59ddea42a2ecc4d72e56882286f853p@chr15:81243109..81243120, +
1.04e-38FFCP PHASE2:Hg19::chr15:81243109..81243120,+#_db59ddea42a2ecc4d72e56882286f853p@chr15:81243109..81243120, +
1.62e-38FFCP PHASE2:Hg19::chrX:2670141..2670151,+#_5c60337d90a05c9d5eaecc90cf20e3eap5@XG
1.62e-38FFCP PHASE1:Hg19::chrX:2670141..2670151,+#_5c60337d90a05c9d5eaecc90cf20e3eap5@XG
4.7e-38FFCP PHASE1:Hg19::chrX:2670039..2670048,+#_01398399fbd727061d675e85bfff9a77p4@XG
4.7e-38FFCP PHASE2:Hg19::chrX:2670039..2670048,+#_01398399fbd727061d675e85bfff9a77p4@XG
4.91e-38FFCP PHASE1:Hg19::chr9:132460997..132461006,+#_2586e38634ff51129f16bc29347bca53p@chr9:132460997..132461006, +
4.91e-38FFCP PHASE2:Hg19::chr9:132460997..132461006,+#_2586e38634ff51129f16bc29347bca53p@chr9:132460997..132461006, +
4.95e-38FFCP PHASE1:Hg19::chr5:111312488..111312498,-#_cdc73666a0d54fe2fe47eb93b4a547d7p35@C5orf13
4.95e-38FFCP PHASE2:Hg19::chr5:111312488..111312498,-#_cdc73666a0d54fe2fe47eb93b4a547d7p35@C5orf13
9.65e-38FFCP PHASE2:Hg19::chr3:120500144..120500155,+#_2ccdf6faea41d39d121d52c4556e770fp@chr3:120500144..120500155, +
9.65e-38FFCP PHASE1:Hg19::chr3:120500144..120500155,+#_2ccdf6faea41d39d121d52c4556e770fp@chr3:120500144..120500155, +
1.02e-37FFCP PHASE1:Hg19::chr19:18896642..18896656,-#_e7e7cadbbe6d5c66cd40927d6f8409bcp@chr19:18896642..18896656, -
1.02e-37FFCP PHASE2:Hg19::chr19:18896642..18896656,-#_e7e7cadbbe6d5c66cd40927d6f8409bcp@chr19:18896642..18896656, -
1.14e-37FFCP PHASE1:Hg19::chr15:81225699..81225710,+#_351ecdbc95239c19f5aed71e67354300p26@KIAA1199
1.14e-37FFCP PHASE2:Hg19::chr15:81225699..81225710,+#_351ecdbc95239c19f5aed71e67354300p26@KIAA1199
1.66e-37FFCP PHASE2:Hg19::chr8:74464406..74464424,-#_ac6ebcb183b6236a619119f577496d2fp4@STAU2
1.66e-37FFCP PHASE1:Hg19::chr8:74464406..74464424,-#_ac6ebcb183b6236a619119f577496d2fp4@STAU2
5.98e-37FFCP PHASE1:Hg19::chr19:18899713..18899727,-#_a60175334fbe3b1010e6969ac66824e2p@chr19:18899713..18899727, -
5.98e-37FFCP PHASE2:Hg19::chr19:18899713..18899727,-#_a60175334fbe3b1010e6969ac66824e2p@chr19:18899713..18899727, -
6.58e-37FFCP PHASE1:Hg19::chr1:860201..860213,-#_41b5359432a77e399b9097f2c325d043p@chr1:860201..860213, -
6.58e-37FFCP PHASE2:Hg19::chr1:860201..860213,-#_41b5359432a77e399b9097f2c325d043p@chr1:860201..860213, -
1.72e-36FFCP PHASE2:Hg19::chr4:41540152..41540157,+#_d1b060cdf4923613abc9e9231d88a4dap20@LIMCH1
1.72e-36FFCP PHASE1:Hg19::chr4:41540152..41540157,+#_d1b060cdf4923613abc9e9231d88a4dap20@LIMCH1
3.61e-36FFCP PHASE2:Hg19::chr19:18900836..18900848,-#_6f691250750714aec0237144da5840a5p@chr19:18900836..18900848, -
3.61e-36FFCP PHASE1:Hg19::chr19:18900836..18900848,-#_6f691250750714aec0237144da5840a5p@chr19:18900836..18900848, -
1.26e-35FFCP PHASE2:Hg19::chr19:46894342..46894354,+#_2faa72e7f041e0ac123da2552e0e45b8p@chr19:46894342..46894354, +
1.26e-35FFCP PHASE1:Hg19::chr19:46894342..46894354,+#_2faa72e7f041e0ac123da2552e0e45b8p@chr19:46894342..46894354, +
2.73e-35FFCP PHASE2:Hg19::chr10:105428550..105428555,-#_7400dbbd4d4521105366aa1c41c2afb4p25@SH3PXD2A
2.73e-35FFCP PHASE1:Hg19::chr10:105428550..105428555,-#_7400dbbd4d4521105366aa1c41c2afb4p25@SH3PXD2A
5.88e-35FFCP PHASE1:Hg19::chr12:8814756..8814767,-#_8979a2bdf609afbed484ddda11ea234ap19@MFAP5
5.88e-35FFCP PHASE2:Hg19::chr12:8814756..8814767,-#_8979a2bdf609afbed484ddda11ea234ap19@MFAP5
1.06e-34FFCP PHASE2:Hg19::chr15:68631946..68631967,-#_36bbe6444df5213249a790218c293ab9p@chr15:68631946..68631967, -
1.06e-34FFCP PHASE1:Hg19::chr15:68631946..68631967,-#_36bbe6444df5213249a790218c293ab9p@chr15:68631946..68631967, -
1.21e-34FFCP PHASE1:Hg19::chr19:18893717..18893745,+#_2c6e3178a390cb67d47b50f99a607878p@chr19:18893717..18893745, +
1.21e-34FFCP PHASE2:Hg19::chr19:18893717..18893745,+#_2c6e3178a390cb67d47b50f99a607878p@chr19:18893717..18893745, +
1.51e-34FFCP PHASE1:Hg19::chr13:102104738..102104747,+#_76f6dd3d075bdfb770874a451d9d88b2p11@ITGBL1
1.51e-34FFCP PHASE2:Hg19::chr13:102104738..102104747,+#_76f6dd3d075bdfb770874a451d9d88b2p11@ITGBL1
1.54e-34FFCP PHASE1:Hg19::chr18:74817666..74817686,-#_fed3b76f234b1b6feac8fe34269dcf9cp2@AB463902, p2@CU688026
1.54e-34FFCP PHASE2:Hg19::chr18:74817666..74817686,-#_fed3b76f234b1b6feac8fe34269dcf9cp2@AB463902, p2@CU688026
1.56e-34FFCP PHASE1:Hg19::chr19:18897375..18897390,-#_d425ef904c49bf5b6af4cdfcbc93009fp4@COMP
1.56e-34FFCP PHASE2:Hg19::chr19:18897375..18897390,-#_d425ef904c49bf5b6af4cdfcbc93009fp4@COMP
2.03e-34FFCP PHASE2:Hg19::chr15:26342114..26342124,+#_249cc215af326bd3853f8684a8ad6ed9p@chr15:26342114..26342124, +
2.03e-34FFCP PHASE1:Hg19::chr15:26342114..26342124,+#_249cc215af326bd3853f8684a8ad6ed9p@chr15:26342114..26342124, +
2.33e-34FFCP PHASE1:Hg19::chr19:18896862..18896874,-#_c9ed4f1813548796c6478f16af0b3302p@chr19:18896862..18896874, -
2.33e-34FFCP PHASE2:Hg19::chr19:18896862..18896874,-#_c9ed4f1813548796c6478f16af0b3302p@chr19:18896862..18896874, -
3.13e-34FFCP PHASE2:Hg19::chr7:155005898..155005912,+#_013aea887152e65ddf666ad03d021445p@chr7:155005898..155005912, +
3.13e-34FFCP PHASE1:Hg19::chr7:155005898..155005912,+#_013aea887152e65ddf666ad03d021445p@chr7:155005898..155005912, +
5.98e-34FFCP PHASE2:Hg19::chr5:150159331..150159340,-#_47421bf98f17619e1fa9f49136d894f7p@chr5:150159331..150159340, -
5.98e-34FFCP PHASE1:Hg19::chr5:150159331..150159340,-#_47421bf98f17619e1fa9f49136d894f7p@chr5:150159331..150159340, -
1.45e-33FFCP PHASE2:Hg19::chr7:134430175..134430178,+#_f98fe9afc975976bbf26495e9e4174adp85@CALD1
1.45e-33FFCP PHASE1:Hg19::chr7:134430175..134430178,+#_f98fe9afc975976bbf26495e9e4174adp85@CALD1
2.03e-33FFCP PHASE2:Hg19::chr6:35219318..35219336,+#_4791dd0dab2524895f84c949154602dep3@AK123742
2.03e-33FFCP PHASE1:Hg19::chr6:35219318..35219336,+#_4791dd0dab2524895f84c949154602dep3@AK123742
2.83e-33FFCP PHASE1:Hg19::chr15:39087815..39087824,-#_4bbdd4585aeaf436ec487ec8786d1203p@chr15:39087815..39087824, -
2.83e-33FFCP PHASE2:Hg19::chr15:39087815..39087824,-#_4bbdd4585aeaf436ec487ec8786d1203p@chr15:39087815..39087824, -
2.89e-33FFCP PHASE2:Hg19::chr1:200452510..200452521,-#_d51b0ac960d84d424c2bab36a52c56a7p@chr1:200452510..200452521, -
2.89e-33FFCP PHASE1:Hg19::chr1:200452510..200452521,-#_d51b0ac960d84d424c2bab36a52c56a7p@chr1:200452510..200452521, -
3.34e-33FFCP PHASE1:Hg19::chr19:18899276..18899289,-#_5ce32bde1906a322e0577006ca72a4f5p@chr19:18899276..18899289, -
3.34e-33FFCP PHASE2:Hg19::chr19:18899276..18899289,-#_5ce32bde1906a322e0577006ca72a4f5p@chr19:18899276..18899289, -

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