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{{UBERON
{{UBERON
|id=UBERON:0007204
|alt_id=
|name=brachiocephalic vasculature
|namespace=
|def=
|xref=
|is_a=UBERON:0002049
|synonym=
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def=
|subset=
|adjacent_to=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=UBERON:0007204
|is_a=UBERON:0002049
|is_obsolete=
|located_in=
|located_in=
|name=brachiocephalic vasculature
|namespace=FANTOM
|obo_creation_date=
|part_of=
|part_of=
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym=
|union_of=
|xref=
}}
}}

Latest revision as of 18:00, 12 September 2014

Name:brachiocephalic vasculature
Namespace:FANTOM

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0002049(vasculature)



Children

part of:UBERON:0001529 (brachiocephalic artery)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

Human (Homo sapiens)

  • 11284-116I6 (Smooth Muscle Cells - Brachiocephalic, donor1)
  • 11361-117I2 (Smooth Muscle Cells - Brachiocephalic, donor2)
  • 11433-118H2 (Smooth Muscle Cells - Brachiocephalic, donor3)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0007204 (brachiocephalic vasculature), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
4.52e-50FFCP PHASE1:Hg19::chr7:46213564..46213575,+#_c835c4f97bbfced5b397b21fa504711bp@chr7:46213564..46213575, +
4.52e-50FFCP PHASE2:Hg19::chr7:46213564..46213575,+#_c835c4f97bbfced5b397b21fa504711bp@chr7:46213564..46213575, +
4.52e-50FFCP PHASE1:Hg19::chr7:46213607..46213616,+#_c835c4f97bbfced5b397b21fa504711bp@chr7:46213607..46213616, +
4.52e-50FFCP PHASE2:Hg19::chr7:46213607..46213616,+#_c835c4f97bbfced5b397b21fa504711bp@chr7:46213607..46213616, +
5.04e-34FFCP PHASE2:Hg19::chr7:46213930..46213940,+#_eaa380537ca1b0328ab1a565ecbc803fp@chr7:46213930..46213940, +
5.04e-34FFCP PHASE1:Hg19::chr12:76175239..76175250,-#_eaa380537ca1b0328ab1a565ecbc803fp@chr12:76175239..76175250, -
5.04e-34FFCP PHASE1:Hg19::chr8:69834272..69834299,-#_eaa380537ca1b0328ab1a565ecbc803fp@chr8:69834272..69834299, -
5.04e-34FFCP PHASE2:Hg19::chr12:76175239..76175250,-#_eaa380537ca1b0328ab1a565ecbc803fp@chr12:76175239..76175250, -
5.04e-34FFCP PHASE2:Hg19::chr8:69834272..69834299,-#_eaa380537ca1b0328ab1a565ecbc803fp@chr8:69834272..69834299, -
5.04e-34FFCP PHASE1:Hg19::chr7:46213930..46213940,+#_eaa380537ca1b0328ab1a565ecbc803fp@chr7:46213930..46213940, +
4.55e-29FFCP PHASE1:Hg19::chr1:162954730..162954735,+#_73571d8900f99f15499db9ae45041154p@chr1:162954730..162954735, +
4.55e-29FFCP PHASE2:Hg19::chr1:162954730..162954735,+#_73571d8900f99f15499db9ae45041154p@chr1:162954730..162954735, +
5.56e-26FFCP PHASE2:Hg19::chr6:121837348..121837351,+#_7a76f6c368cdd0ba8544b4134e3f55dap@chr6:121837348..121837351, +
5.56e-26FFCP PHASE1:Hg19::chr7:46214057..46214073,+#_7a76f6c368cdd0ba8544b4134e3f55dap@chr7:46214057..46214073, +
5.56e-26FFCP PHASE2:Hg19::chr5:102847532..102847538,+#_7a76f6c368cdd0ba8544b4134e3f55dap@chr5:102847532..102847538, +
5.56e-26FFCP PHASE2:Hg19::chr7:46214057..46214073,+#_7a76f6c368cdd0ba8544b4134e3f55dap@chr7:46214057..46214073, +
5.56e-26FFCP PHASE1:Hg19::chr7:82172409..82172413,+#_7a76f6c368cdd0ba8544b4134e3f55dap@chr7:82172409..82172413, +
5.56e-26FFCP PHASE2:Hg19::chr7:82172409..82172413,+#_7a76f6c368cdd0ba8544b4134e3f55dap@chr7:82172409..82172413, +
5.56e-26FFCP PHASE1:Hg19::chr5:102847532..102847538,+#_7a76f6c368cdd0ba8544b4134e3f55dap@chr5:102847532..102847538, +
5.56e-26FFCP PHASE1:Hg19::chr6:121837348..121837351,+#_7a76f6c368cdd0ba8544b4134e3f55dap@chr6:121837348..121837351, +
7.14e-26FFCP PHASE1:Hg19::chr7:46214090..46214099,+#_e7ce669031131b9acb3073175641879dp@chr7:46214090..46214099, +
7.14e-26FFCP PHASE2:Hg19::chr7:46214090..46214099,+#_e7ce669031131b9acb3073175641879dp@chr7:46214090..46214099, +
9.18e-26FFCP PHASE1:Hg19::chr11:73000449..73000459,+#_7c32e79faeffbd9f56357567c92fb8b6p13@P2RY6
9.18e-26FFCP PHASE2:Hg19::chr11:73000449..73000459,+#_7c32e79faeffbd9f56357567c92fb8b6p13@P2RY6
1.26e-21FFCP PHASE1:Hg19::chr9:140351903..140351920,-#_5beff85275f9cb522d477778d698b66cp6@NELF
1.26e-21FFCP PHASE2:Hg19::chr9:140351903..140351920,-#_5beff85275f9cb522d477778d698b66cp6@NELF
5.7e-21FFCP PHASE1:Hg19::chr5:95053375..95053385,+#_6b4af856edf23cf0838d8c72b98c265cp30@RHOBTB3
5.7e-21FFCP PHASE2:Hg19::chr5:95053375..95053385,+#_6b4af856edf23cf0838d8c72b98c265cp30@RHOBTB3
5.4e-20FFCP PHASE1:Hg19::chr4:74702707..74702718,+#_94476b07c03e0221c49d8f040c323b1ap7@CXCL6
5.4e-20FFCP PHASE2:Hg19::chr4:74702707..74702718,+#_94476b07c03e0221c49d8f040c323b1ap7@CXCL6
5.88e-19FFCP PHASE1:Hg19::chr17:67875049..67875058,+#_19b569a8bb27c5ed46ab64d678b66f0fp@chr17:67875049..67875058, +
5.88e-19FFCP PHASE2:Hg19::chr17:67875049..67875058,+#_19b569a8bb27c5ed46ab64d678b66f0fp@chr17:67875049..67875058, +
2.9e-18FFCP PHASE1:Hg19::chr1:79219369..79219376,+#_2f0862c35fa0cce75cd35e90278d09cbp@chr1:79219369..79219376, +
2.9e-18FFCP PHASE2:Hg19::chr1:79219369..79219376,+#_2f0862c35fa0cce75cd35e90278d09cbp@chr1:79219369..79219376, +
7.67e-18FFCP PHASE2:Hg19::chr3:30226342..30226387,-#_7fc70a8c8c1282fcecbc5bfe7041f1f9p@chr3:30226342..30226387, -
7.67e-18FFCP PHASE1:Hg19::chr3:30226342..30226387,-#_7fc70a8c8c1282fcecbc5bfe7041f1f9p@chr3:30226342..30226387, -
9.07e-18FFCP PHASE1:Hg19::chr1:183204105..183204116,+#_022f0b078580f9000999deb99bab7dd2p@chr1:183204105..183204116, +
9.07e-18FFCP PHASE2:Hg19::chr1:183204105..183204116,+#_022f0b078580f9000999deb99bab7dd2p@chr1:183204105..183204116, +
9.07e-18FFCP PHASE1:Hg19::chr11:33891541..33891551,-#_022f0b078580f9000999deb99bab7dd2p10@LMO2
9.07e-18FFCP PHASE2:Hg19::chr11:33891541..33891551,-#_022f0b078580f9000999deb99bab7dd2p10@LMO2
1.04e-17FFCP PHASE1:Hg19::chr8:69765189..69765209,-#_cd6b072d784dee3a1832d88b9270e8e3p1@ENST00000522354
1.04e-17FFCP PHASE2:Hg19::chr8:69765189..69765209,-#_cd6b072d784dee3a1832d88b9270e8e3p1@ENST00000522354
1.27e-17FFCP PHASE2:Hg19::chr8:128926504..128926507,-#_6e96a1def2693ca4a3076d748a3599adp@chr8:128926504..128926507, -
1.27e-17FFCP PHASE1:Hg19::chr8:128926504..128926507,-#_6e96a1def2693ca4a3076d748a3599adp@chr8:128926504..128926507, -
3.12e-17FFCP PHASE1:Hg19::chr17:12453278..12453291,+#_0b29274647553e6590e0d350e225c0d8p1@FLJ34690
3.12e-17FFCP PHASE2:Hg19::chr17:12453278..12453291,+#_0b29274647553e6590e0d350e225c0d8p1@FLJ34690
1.08e-16FFCP PHASE1:Hg19::chr7:41956273..41956284,-#_92216df3ec62a46b1c1c7245e59d959ap@chr7:41956273..41956284, -
1.08e-16FFCP PHASE2:Hg19::chr7:41956273..41956284,-#_92216df3ec62a46b1c1c7245e59d959ap@chr7:41956273..41956284, -
7.31e-16FFCP PHASE1:Hg19::chr10:33247025..33247030,+#_21ad0655f881d23932a4ee468e5105c6p@chr10:33247025..33247030, +
7.31e-16FFCP PHASE2:Hg19::chr10:33247025..33247030,+#_21ad0655f881d23932a4ee468e5105c6p@chr10:33247025..33247030, +
1.08e-15FFCP PHASE1:Hg19::chr6:53359400..53359406,+#_09e437459c385b06d7a3a351de182a82p@chr6:53359400..53359406, +
1.08e-15FFCP PHASE2:Hg19::chr6:53359400..53359406,+#_09e437459c385b06d7a3a351de182a82p@chr6:53359400..53359406, +
1.23e-15FFCP PHASE1:Hg19::chr7:45952362..45952373,-#_dbbaec3893a69c7ddb8cd52a1b1aa195p25@IGFBP3
1.23e-15FFCP PHASE2:Hg19::chr7:45952362..45952373,-#_dbbaec3893a69c7ddb8cd52a1b1aa195p25@IGFBP3
1.33e-15FFCP PHASE1:Hg19::chr4:99934696..99934700,-#_31f1688cab7f5f8a552436549858e1e3p@chr4:99934696..99934700, -
1.33e-15FFCP PHASE1:Hg19::chr5:63961948..63961959,-#_31f1688cab7f5f8a552436549858e1e3p@chr5:63961948..63961959, -
1.33e-15FFCP PHASE2:Hg19::chr5:63961948..63961959,-#_31f1688cab7f5f8a552436549858e1e3p@chr5:63961948..63961959, -
1.33e-15FFCP PHASE2:Hg19::chr4:99934696..99934700,-#_31f1688cab7f5f8a552436549858e1e3p@chr4:99934696..99934700, -
2.05e-15FFCP PHASE1:Hg19::chr21:26713474..26713508,-#_61c8225c89e7dc589f9e1b03f0b47340p@chr21:26713474..26713508, -
2.05e-15FFCP PHASE2:Hg19::chr21:26713474..26713508,-#_61c8225c89e7dc589f9e1b03f0b47340p@chr21:26713474..26713508, -
2.05e-15FFCP PHASE1:Hg19::chr9:118431048..118431059,+#_61c8225c89e7dc589f9e1b03f0b47340p@chr9:118431048..118431059, +
2.05e-15FFCP PHASE2:Hg19::chr9:118431048..118431059,+#_61c8225c89e7dc589f9e1b03f0b47340p@chr9:118431048..118431059, +
2.24e-15FFCP PHASE1:Hg19::chr3:67141193..67141198,+#_e35d5cc09b197f8144640dd4a99f3291p@chr3:67141193..67141198, +
2.24e-15FFCP PHASE2:Hg19::chr3:67141193..67141198,+#_e35d5cc09b197f8144640dd4a99f3291p@chr3:67141193..67141198, +
2.37e-15FFCP PHASE1:Hg19::chr4:67300735..67300776,-#_acb591f4b031059a78ea1265fe08b206p@chr4:67300735..67300776, -
2.37e-15FFCP PHASE2:Hg19::chr4:67300735..67300776,-#_acb591f4b031059a78ea1265fe08b206p@chr4:67300735..67300776, -
2.74e-15FFCP PHASE2:Hg19::chr12:65959975..65959997,+#_24c3452285a73f51475aac0a1c61c273p@chr12:65959975..65959997, +
2.74e-15FFCP PHASE1:Hg19::chr12:65959975..65959997,+#_24c3452285a73f51475aac0a1c61c273p@chr12:65959975..65959997, +
3.37e-15FFCP PHASE1:Hg19::chr3:106484411..106484418,+#_58857ebe5002640a4081798380c11c68p@chr3:106484411..106484418, +
3.37e-15FFCP PHASE2:Hg19::chr3:106484411..106484418,+#_58857ebe5002640a4081798380c11c68p@chr3:106484411..106484418, +
3.46e-15FFCP PHASE1:Hg19::chr9:118916228..118916241,+#_756d02a2d64013c3e015c218eac81cf8p18@PAPPA
3.46e-15FFCP PHASE2:Hg19::chr9:118916228..118916241,+#_756d02a2d64013c3e015c218eac81cf8p18@PAPPA
4.61e-15FFCP PHASE2:Hg19::chr9:118435168..118435186,+#_e0963179b3ad0a48804daa27d221ed2cp@chr9:118435168..118435186, +
4.61e-15FFCP PHASE1:Hg19::chr9:118435168..118435186,+#_e0963179b3ad0a48804daa27d221ed2cp@chr9:118435168..118435186, +
5.71e-15FFCP PHASE1:Hg19::chr8:26248799..26248836,-#_580f90dee53a542e9e874a7ed1b7129bp@chr8:26248799..26248836, -
5.71e-15FFCP PHASE2:Hg19::chr8:26248799..26248836,-#_580f90dee53a542e9e874a7ed1b7129bp@chr8:26248799..26248836, -
1.37e-14FFCP PHASE1:Hg19::chr7:93516018..93516037,-#_d03c661145a81926db78b8e02c9d8632p@chr7:93516018..93516037, -
1.37e-14FFCP PHASE2:Hg19::chr7:93516018..93516037,-#_d03c661145a81926db78b8e02c9d8632p@chr7:93516018..93516037, -
2.36e-14FFCP PHASE2:Hg19::chr3:106569465..106569481,-#_de2c5f2928ef27cd046848762f549774p@chr3:106569465..106569481, -
2.36e-14FFCP PHASE1:Hg19::chr3:106569465..106569481,-#_de2c5f2928ef27cd046848762f549774p@chr3:106569465..106569481, -
5.17e-14FFCP PHASE1:Hg19::chr18:25757224..25757232,-#_d21f9811195d087282e38af3d23010cfp19@CDH2
5.17e-14FFCP PHASE2:Hg19::chr18:25757224..25757232,-#_d21f9811195d087282e38af3d23010cfp19@CDH2
5.44e-14FFCP PHASE1:Hg19::chr7:45960456..45960484,+#_d9861dcc8c5a1c69de6618d1f0ed8262p@chr7:45960456..45960484, +
5.44e-14FFCP PHASE2:Hg19::chr7:45960456..45960484,+#_d9861dcc8c5a1c69de6618d1f0ed8262p@chr7:45960456..45960484, +
6.43e-14FFCP PHASE1:Hg19::chr5:102847592..102847595,+#_18856ac1157f3ba4e98eb191aa447661p@chr5:102847592..102847595, +
6.43e-14FFCP PHASE2:Hg19::chr5:102847592..102847595,+#_18856ac1157f3ba4e98eb191aa447661p@chr5:102847592..102847595, +
9.4e-14FFCP PHASE1:Hg19::chr6:151392051..151392059,+#_fbafe64fa28f9c9a3a20b847788b96bap@chr6:151392051..151392059, +
9.4e-14FFCP PHASE2:Hg19::chr6:151392051..151392059,+#_fbafe64fa28f9c9a3a20b847788b96bap@chr6:151392051..151392059, +
9.4e-14FFCP PHASE2:Hg19::chr16:59666186..59666189,-#_fbafe64fa28f9c9a3a20b847788b96bap@chr16:59666186..59666189, -
9.4e-14FFCP PHASE1:Hg19::chr16:59666186..59666189,-#_fbafe64fa28f9c9a3a20b847788b96bap@chr16:59666186..59666189, -
1.11e-13FFCP PHASE2:Hg19::chr4:74736294..74736305,+#_784d3169b4146f9805f5143010e859d0p@chr4:74736294..74736305, +
1.11e-13FFCP PHASE1:Hg19::chr4:74736294..74736305,+#_784d3169b4146f9805f5143010e859d0p@chr4:74736294..74736305, +
1.25e-13FFCP PHASE1:Hg19::chr9:118916382..118916386,+#_f3e4f3cc1f79dded09f3417a318445a5p19@PAPPA
1.25e-13FFCP PHASE2:Hg19::chr9:118916382..118916386,+#_f3e4f3cc1f79dded09f3417a318445a5p19@PAPPA
1.37e-13FFCP PHASE1:Hg19::chr9:118356219..118356259,+#_6bde345340c7b6c4b8c06a4d93465083p@chr9:118356219..118356259, +
1.37e-13FFCP PHASE2:Hg19::chr9:118356219..118356259,+#_6bde345340c7b6c4b8c06a4d93465083p@chr9:118356219..118356259, +
2.12e-13FFCP PHASE1:Hg19::chr4:74608220..74608239,-#_816db2a65633850b1b1b3028b9cd7b4fp@chr4:74608220..74608239, -
2.12e-13FFCP PHASE2:Hg19::chr4:74608220..74608239,-#_816db2a65633850b1b1b3028b9cd7b4fp@chr4:74608220..74608239, -
5.6e-13FFCP PHASE1:Hg19::chr2:159994500..159994523,+#_b55bc99636a7d37ddf3cd0efaaf98875p@chr2:159994500..159994523, +
5.6e-13FFCP PHASE2:Hg19::chr2:159994500..159994523,+#_b55bc99636a7d37ddf3cd0efaaf98875p@chr2:159994500..159994523, +

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