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{{UBERON
{{UBERON
|id=UBERON:0004797
|name=blood vessel layer
|namespace=
|def=
|xref=MA:0002854
|is_a=UBERON:0000119
|synonym=
|comment=Editor note: check this
|alt_id=
|alt_id=
|disjoint_from=
|comment=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def=
|subset=
|adjacent_to=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=UBERON:0004797
|is_a=UBERON:0004120 ;;UBERON:0004923
|is_obsolete=
|located_in=
|located_in=
|part_of=
|name=blood vessel layer
|namespace=FANTOM
|obo_creation_date=
|part_of=UBERON:0001981
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym=
|union_of=
|xref=MA:0002854
}}
}}

Latest revision as of 17:48, 12 September 2014

Name:blood vessel layer
Namespace:FANTOM
Xrefs:
links:
MA:0002854

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0004120(mesoderm-derived structure),UBERON:0004923(organ component layer)
part_of:UBERON:0001981(blood vessel)



Children

is a:UBERON:0002523 (tunica intima),UBERON:0005734 (tunica adventitia of blood vessel)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

Human (Homo sapiens)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0004797 (blood vessel layer), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
8.52e-64FFCP PHASE2:Hg19::chr7:25815812..25815822,-#_72ac0eef6e80fd41fac069f8d9bffea5p@chr7:25815812..25815822, -
8.52e-64FFCP PHASE1:Hg19::chr7:25815812..25815822,-#_72ac0eef6e80fd41fac069f8d9bffea5p@chr7:25815812..25815822, -
4.76e-57FFCP PHASE1:Hg19::chr12:3373147..3373149,-#_bcb8880235654abdebddbb1168332776p@chr12:3373147..3373149, -
4.76e-57FFCP PHASE2:Hg19::chr12:3373147..3373149,-#_bcb8880235654abdebddbb1168332776p@chr12:3373147..3373149, -
3.24e-51FFCP PHASE1:Hg19::chr1:20355975..20355980,-#_f9e10e428ee8f511af48097fda260089p@chr1:20355975..20355980, -
3.24e-51FFCP PHASE2:Hg19::chr1:20355975..20355980,-#_f9e10e428ee8f511af48097fda260089p@chr1:20355975..20355980, -
4.53e-43FFCP PHASE1:Hg19::chr1:237331032..237331036,+#_5f8ed76a4cbe56dca7fbdfe4a3472332p@chr1:237331032..237331036, +
4.53e-43FFCP PHASE2:Hg19::chr1:237331032..237331036,+#_5f8ed76a4cbe56dca7fbdfe4a3472332p@chr1:237331032..237331036, +
5.22e-43FFCP PHASE2:Hg19::chr4:67298860..67298867,-#_125fc192c36bec70859f6e286aa17f2cp@chr4:67298860..67298867, -
5.22e-43FFCP PHASE1:Hg19::chr4:67298860..67298867,-#_125fc192c36bec70859f6e286aa17f2cp@chr4:67298860..67298867, -
9.27e-43FFCP PHASE2:Hg19::chr8:93031384..93031395,-#_483ca9459bf509b6982ab6c3874dc483p34@RUNX1T1
9.27e-43FFCP PHASE1:Hg19::chr8:93031384..93031395,-#_483ca9459bf509b6982ab6c3874dc483p34@RUNX1T1
1.49e-38FFCP PHASE2:Hg19::chr7:22687639..22687644,+#_8b5e48b73556fbc7e4de04482d12b694p@chr7:22687639..22687644, +
1.49e-38FFCP PHASE2:Hg19::chr5:93904635..93904644,+#_8b5e48b73556fbc7e4de04482d12b694p@chr5:93904635..93904644, +
1.49e-38FFCP PHASE1:Hg19::chr7:22687639..22687644,+#_8b5e48b73556fbc7e4de04482d12b694p@chr7:22687639..22687644, +
1.49e-38FFCP PHASE1:Hg19::chr5:93904635..93904644,+#_8b5e48b73556fbc7e4de04482d12b694p@chr5:93904635..93904644, +
1.8e-38FFCP PHASE2:Hg19::chr11:29207409..29207435,+#_bbcf88ff21ec0332acbfd8b2d7ce8fcfp@chr11:29207409..29207435, +
1.8e-38FFCP PHASE1:Hg19::chr11:29207409..29207435,+#_bbcf88ff21ec0332acbfd8b2d7ce8fcfp@chr11:29207409..29207435, +
2.18e-38FFCP PHASE1:Hg19::chr1:11907265..11907271,-#_ac325ffb3f0e9350bf10f7cd8b02f1ebp9@NPPA
2.18e-38FFCP PHASE2:Hg19::chr2:18116344..18116353,+#_ac325ffb3f0e9350bf10f7cd8b02f1ebp@chr2:18116344..18116353, +
2.18e-38FFCP PHASE1:Hg19::chr2:18116344..18116353,+#_ac325ffb3f0e9350bf10f7cd8b02f1ebp@chr2:18116344..18116353, +
2.18e-38FFCP PHASE2:Hg19::chr6:6739548..6739577,-#_ac325ffb3f0e9350bf10f7cd8b02f1ebp@chr6:6739548..6739577, -
2.18e-38FFCP PHASE1:Hg19::chr6:6739548..6739577,-#_ac325ffb3f0e9350bf10f7cd8b02f1ebp@chr6:6739548..6739577, -
2.18e-38FFCP PHASE2:Hg19::chr1:11907265..11907271,-#_ac325ffb3f0e9350bf10f7cd8b02f1ebp9@NPPA
5.57e-37FFCP PHASE2:Hg19::chrX:112324334..112324339,-#_df449cae2f98897510b2fda221130e96p@chrX:112324334..112324339, -
5.57e-37FFCP PHASE1:Hg19::chrX:112324334..112324339,-#_df449cae2f98897510b2fda221130e96p@chrX:112324334..112324339, -
8.05e-37FFCP PHASE2:Hg19::chr2:220491902..220491915,+#_2f7d0b476841ac36f343551f068831efp11@SLC4A3
8.05e-37FFCP PHASE1:Hg19::chr2:220491902..220491915,+#_2f7d0b476841ac36f343551f068831efp11@SLC4A3
9.1e-37FFCP PHASE2:Hg19::chr2:179533457..179533461,-#_47f89cca7be603655534d09342a108d6p@chr2:179533457..179533461, -
9.1e-37FFCP PHASE1:Hg19::chr2:179533457..179533461,-#_47f89cca7be603655534d09342a108d6p@chr2:179533457..179533461, -
1.03e-36FFCP PHASE2:Hg19::chr2:179398102..179398109,-#_d9b7430eb2b31deb9b8c3a5a3ab38570p@chr2:179398102..179398109, -
1.03e-36FFCP PHASE1:Hg19::chr2:179398102..179398109,-#_d9b7430eb2b31deb9b8c3a5a3ab38570p@chr2:179398102..179398109, -
1.21e-32FFCP PHASE1:Hg19::chr5:123739302..123739319,-#_f8e9cfd6f6cc6f15a4e35a1d33b54e83p@chr5:123739302..123739319, -
1.21e-32FFCP PHASE2:Hg19::chr5:123739302..123739319,-#_f8e9cfd6f6cc6f15a4e35a1d33b54e83p@chr5:123739302..123739319, -
1.24e-32FFCP PHASE2:Hg19::chr7:112635649..112635669,-#_34b94cf66fc71beb0149d81b804b2f86p2@ENST00000447785
1.24e-32FFCP PHASE1:Hg19::chr7:112635649..112635669,-#_34b94cf66fc71beb0149d81b804b2f86p2@ENST00000447785
1.35e-32FFCP PHASE2:Hg19::chr18:64271475..64271484,-#_20a44d606931151771ab5221120cd356p6@CDH19
1.35e-32FFCP PHASE1:Hg19::chr18:64271475..64271484,-#_20a44d606931151771ab5221120cd356p6@CDH19
1.5e-32FFCP PHASE2:Hg19::chr7:35286774..35286778,-#_9845b2ec25ecb942fe32e2975c6c90ccp@chr7:35286774..35286778, -
1.5e-32FFCP PHASE1:Hg19::chr7:35286774..35286778,-#_9845b2ec25ecb942fe32e2975c6c90ccp@chr7:35286774..35286778, -
1.67e-32FFCP PHASE2:Hg19::chr6:129355052..129355056,+#_ec872f80e82198b500ae5f132384b65ep@chr6:129355052..129355056, +
1.67e-32FFCP PHASE1:Hg19::chr6:129355052..129355056,+#_ec872f80e82198b500ae5f132384b65ep@chr6:129355052..129355056, +
2.08e-32FFCP PHASE1:Hg19::chr3:16940540..16940554,+#_1a16532fd5befb63b7e961361727491ap@chr3:16940540..16940554, +
2.08e-32FFCP PHASE2:Hg19::chr3:16940540..16940554,+#_1a16532fd5befb63b7e961361727491ap@chr3:16940540..16940554, +
2.31e-32FFCP PHASE2:Hg19::chr20:33565465..33565475,+#_2e5d2409a88e01b99180bc3d54e62e8dp9@MYH7B
2.31e-32FFCP PHASE2:Hg19::chr19:55661803..55661807,-#_2e5d2409a88e01b99180bc3d54e62e8dp@chr19:55661803..55661807, -
2.31e-32FFCP PHASE1:Hg19::chr20:33565465..33565475,+#_2e5d2409a88e01b99180bc3d54e62e8dp9@MYH7B
2.31e-32FFCP PHASE1:Hg19::chr19:55661803..55661807,-#_2e5d2409a88e01b99180bc3d54e62e8dp@chr19:55661803..55661807, -
2.31e-32FFCP PHASE2:Hg19::chr1:201328779..201328797,-#_2e5d2409a88e01b99180bc3d54e62e8dp@chr1:201328779..201328797, -
2.31e-32FFCP PHASE1:Hg19::chr1:201328779..201328797,-#_2e5d2409a88e01b99180bc3d54e62e8dp@chr1:201328779..201328797, -
2.31e-32FFCP PHASE2:Hg19::chr3:131523446..131523459,-#_2e5d2409a88e01b99180bc3d54e62e8dp@chr3:131523446..131523459, -
2.31e-32FFCP PHASE1:Hg19::chr3:131523446..131523459,-#_2e5d2409a88e01b99180bc3d54e62e8dp@chr3:131523446..131523459, -
2.86e-32FFCP PHASE2:Hg19::chr6:36812121..36812130,-#_538e6a8ac20f971f14467e60186c96abp@chr6:36812121..36812130, -
2.86e-32FFCP PHASE1:Hg19::chr6:36812121..36812130,-#_538e6a8ac20f971f14467e60186c96abp@chr6:36812121..36812130, -
3.19e-32FFCP PHASE2:Hg19::chr14:105939326..105939337,+#_7ea94bf61591fdfa801099079a2e06fap16@CRIP2
3.19e-32FFCP PHASE1:Hg19::chr14:105939326..105939337,+#_7ea94bf61591fdfa801099079a2e06fap16@CRIP2
3.29e-32FFCP PHASE1:Hg19::chr3:46607836..46607847,-#_365cf7605817fc9a5ed8221b8c3a992cp5@LRRC2
3.29e-32FFCP PHASE2:Hg19::chr3:46607836..46607847,-#_365cf7605817fc9a5ed8221b8c3a992cp5@LRRC2
3.55e-32FFCP PHASE2:Hg19::chr1:206838422..206838456,+#_a32ef8093f7846155360a6958df62cfep@chr1:206838422..206838456, +
3.55e-32FFCP PHASE1:Hg19::chr1:206838422..206838456,+#_a32ef8093f7846155360a6958df62cfep@chr1:206838422..206838456, +
3.95e-32FFCP PHASE2:Hg19::chr1:231983543..231983554,-#_4682dd026203301592adeb358ebf892dp@chr1:231983543..231983554, -
3.95e-32FFCP PHASE1:Hg19::chr1:231983543..231983554,-#_4682dd026203301592adeb358ebf892dp@chr1:231983543..231983554, -
1.78e-29FFCP PHASE1:Hg19::chr14:68614207..68614210,-#_9c501ef7523d6722c5a37c180c09b313p@chr14:68614207..68614210, -
1.78e-29FFCP PHASE1:Hg19::chr3:29800057..29800074,+#_9c501ef7523d6722c5a37c180c09b313p@chr3:29800057..29800074, +
1.78e-29FFCP PHASE2:Hg19::chr5:37772283..37772287,+#_9c501ef7523d6722c5a37c180c09b313p@chr5:37772283..37772287, +
1.78e-29FFCP PHASE1:Hg19::chr1:199267284..199267291,+#_9c501ef7523d6722c5a37c180c09b313p@chr1:199267284..199267291, +
1.78e-29FFCP PHASE2:Hg19::chr5:99390735..99390743,-#_9c501ef7523d6722c5a37c180c09b313p@chr5:99390735..99390743, -
1.78e-29FFCP PHASE2:Hg19::chr11:29331768..29331769,-#_9c501ef7523d6722c5a37c180c09b313p@chr11:29331768..29331769, -
1.78e-29FFCP PHASE1:Hg19::chr7:47835322..47835327,-#_9c501ef7523d6722c5a37c180c09b313p@chr7:47835322..47835327, -
1.78e-29FFCP PHASE2:Hg19::chr2:55327810..55327812,-#_9c501ef7523d6722c5a37c180c09b313p@chr2:55327810..55327812, -
1.78e-29FFCP PHASE1:Hg19::chr12:76175230..76175237,-#_9c501ef7523d6722c5a37c180c09b313p@chr12:76175230..76175237, -
1.78e-29FFCP PHASE2:Hg19::chr5:163602194..163602199,-#_9c501ef7523d6722c5a37c180c09b313p@chr5:163602194..163602199, -
1.78e-29FFCP PHASE2:Hg19::chr2:162943708..162943739,+#_9c501ef7523d6722c5a37c180c09b313p@chr2:162943708..162943739, +
1.78e-29FFCP PHASE1:Hg19::chr5:37772283..37772287,+#_9c501ef7523d6722c5a37c180c09b313p@chr5:37772283..37772287, +
1.78e-29FFCP PHASE1:Hg19::chr21:28955184..28955188,+#_9c501ef7523d6722c5a37c180c09b313p@chr21:28955184..28955188, +
1.78e-29FFCP PHASE2:Hg19::chr2:18807662..18807665,-#_9c501ef7523d6722c5a37c180c09b313p@chr2:18807662..18807665, -
1.78e-29FFCP PHASE1:Hg19::chr5:163602194..163602199,-#_9c501ef7523d6722c5a37c180c09b313p@chr5:163602194..163602199, -
1.78e-29FFCP PHASE1:Hg19::chr11:10349108..10349113,+#_9c501ef7523d6722c5a37c180c09b313p@chr11:10349108..10349113, +
1.78e-29FFCP PHASE2:Hg19::chr14:23158454..23158473,-#_9c501ef7523d6722c5a37c180c09b313p@chr14:23158454..23158473, -
1.78e-29FFCP PHASE2:Hg19::chr11:10349108..10349113,+#_9c501ef7523d6722c5a37c180c09b313p@chr11:10349108..10349113, +
1.78e-29FFCP PHASE2:Hg19::chr3:98699947..98699957,-#_9c501ef7523d6722c5a37c180c09b313p@chr3:98699947..98699957, -
1.78e-29FFCP PHASE2:Hg19::chr12:76108116..76108123,-#_9c501ef7523d6722c5a37c180c09b313p@chr12:76108116..76108123, -
1.78e-29FFCP PHASE1:Hg19::chr11:29331768..29331769,-#_9c501ef7523d6722c5a37c180c09b313p@chr11:29331768..29331769, -
1.78e-29FFCP PHASE1:Hg19::chr14:23158454..23158473,-#_9c501ef7523d6722c5a37c180c09b313p@chr14:23158454..23158473, -
1.78e-29FFCP PHASE2:Hg19::chr8:123376383..123376386,+#_9c501ef7523d6722c5a37c180c09b313p@chr8:123376383..123376386, +
1.78e-29FFCP PHASE2:Hg19::chr4:77703570..77703577,+#_9c501ef7523d6722c5a37c180c09b313p@chr4:77703570..77703577, +
1.78e-29FFCP PHASE1:Hg19::chr5:99390735..99390743,-#_9c501ef7523d6722c5a37c180c09b313p@chr5:99390735..99390743, -
1.78e-29FFCP PHASE1:Hg19::chr2:55327810..55327812,-#_9c501ef7523d6722c5a37c180c09b313p@chr2:55327810..55327812, -
1.78e-29FFCP PHASE1:Hg19::chr2:162943708..162943739,+#_9c501ef7523d6722c5a37c180c09b313p@chr2:162943708..162943739, +
1.78e-29FFCP PHASE1:Hg19::chr8:123376383..123376386,+#_9c501ef7523d6722c5a37c180c09b313p@chr8:123376383..123376386, +
1.78e-29FFCP PHASE2:Hg19::chr7:32133423..32133424,+#_9c501ef7523d6722c5a37c180c09b313p@chr7:32133423..32133424, +
1.78e-29FFCP PHASE2:Hg19::chr6:57128349..57128352,+#_9c501ef7523d6722c5a37c180c09b313p@chr6:57128349..57128352, +
1.78e-29FFCP PHASE1:Hg19::chr2:18807662..18807665,-#_9c501ef7523d6722c5a37c180c09b313p@chr2:18807662..18807665, -
1.78e-29FFCP PHASE2:Hg19::chr6:140070083..140070090,+#_9c501ef7523d6722c5a37c180c09b313p@chr6:140070083..140070090, +
1.78e-29FFCP PHASE2:Hg19::chr2:216588131..216588134,+#_9c501ef7523d6722c5a37c180c09b313p@chr2:216588131..216588134, +
1.78e-29FFCP PHASE2:Hg19::chr12:76175230..76175237,-#_9c501ef7523d6722c5a37c180c09b313p@chr12:76175230..76175237, -
1.78e-29FFCP PHASE2:Hg19::chr1:219498496..219498503,-#_9c501ef7523d6722c5a37c180c09b313p@chr1:219498496..219498503, -
1.78e-29FFCP PHASE1:Hg19::chr3:98699947..98699957,-#_9c501ef7523d6722c5a37c180c09b313p@chr3:98699947..98699957, -
1.78e-29FFCP PHASE2:Hg19::chr2:151537893..151537898,-#_9c501ef7523d6722c5a37c180c09b313p@chr2:151537893..151537898, -
1.78e-29FFCP PHASE1:Hg19::chr4:77703570..77703577,+#_9c501ef7523d6722c5a37c180c09b313p@chr4:77703570..77703577, +

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