UBERON:0004785: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| (One intermediate revision by the same user not shown) | |||
| Line 14: | Line 14: | ||
|obo_creation_date= | |obo_creation_date= | ||
|subset= | |subset= | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
Latest revision as of 13:37, 27 June 2012
| Name: | respiratory system mucosa | ||
|---|---|---|---|
| Definition: | "A mucosa that is part of a respiratory system [Obol]." [OBOL:automatic] | ||
| Xrefs: |
| ||
| Synonyms: |
"apparatus respiratorius mucosa" EXACT [OBOL:automatic] "apparatus respiratorius mucosa of organ" EXACT [OBOL:automatic] "apparatus respiratorius mucous membrane" EXACT [OBOL:automatic] "mucosa of apparatus respiratorius" EXACT [OBOL:automatic] "mucosa of organ of apparatus respiratorius" EXACT [OBOL:automatic] "mucosa of organ of respiratory system" EXACT [OBOL:automatic] "mucosa of respiratory system" EXACT [OBOL:automatic] "mucous membrane of apparatus respiratorius" EXACT [OBOL:automatic] "mucous membrane of respiratory system" EXACT [OBOL:automatic] "respiratory mucosa" RELATED [BTO:0000973] "respiratory system mucosa of organ" EXACT [OBOL:automatic] "respiratory system mucous membrane" EXACT [OBOL:automatic] | ||
| Comments: | TODO - split respiratory tract mucosa from respiratory system mucosa |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0000344(mucosa) |
|---|---|
| part_of: | UBERON:0001004(respiratory system) |
Children
| is a: | UBERON:0001826 (nasal cavity mucosa) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10275-104E5
- 10303-104H6
- 10331-105B7
- 10434-106E2 (oral squamous cell carcinoma cell line:Ca9-22)
- 10512-107D8
- 10532-107G1
- 10537-107G6
- 10544-107H4 (oral squamous cell carcinoma cell line:SAS)
- 10545-107H5 (oral squamous cell carcinoma cell line:HSC-3)
- 10550-107I1 (oral squamous cell carcinoma cell line:HO-1-u-1)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0004785 (respiratory system mucosa), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 1.55e-98 | FFCP PHASE2:Hg19::chr22:30255054..30255065,-#_0b01450fb3e5ec7b5820e15c9de3489b | p@chr22:30255054..30255065, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr22:30255054..30255065,-#_0b01450fb3e5ec7b5820e15c9de3489b | p@chr22:30255054..30255065, - |
| 3.35e-66 | FFCP PHASE1:Hg19::chr17:39675882..39675894,-#_44737b417347bf41eb54139ea9fd6619 | p@chr17:39675882..39675894, - |
| 3.35e-66 | FFCP PHASE2:Hg19::chr17:39675882..39675894,-#_44737b417347bf41eb54139ea9fd6619 | p@chr17:39675882..39675894, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr16:57935516..57935527,-#_e497681bc51fc4d66aeaf2f61ecef052 | p@chr16:57935516..57935527, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr1:96208925..96208927,+#_e497681bc51fc4d66aeaf2f61ecef052 | p@chr1:96208925..96208927, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr8:71613745..71613750,-#_e497681bc51fc4d66aeaf2f61ecef052 | p@chr8:71613745..71613750, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr15:79327658..79327669,-#_e497681bc51fc4d66aeaf2f61ecef052 | p@chr15:79327658..79327669, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr16:57935516..57935527,-#_e497681bc51fc4d66aeaf2f61ecef052 | p@chr16:57935516..57935527, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr3:59175564..59175565,+#_e497681bc51fc4d66aeaf2f61ecef052 | p@chr3:59175564..59175565, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr2:61242118..61242125,-#_e497681bc51fc4d66aeaf2f61ecef052 | p@chr2:61242118..61242125, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr6:102844491..102844494,+#_e497681bc51fc4d66aeaf2f61ecef052 | p@chr6:102844491..102844494, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr3:54660709..54660712,-#_e497681bc51fc4d66aeaf2f61ecef052 | p@chr3:54660709..54660712, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr12:79323118..79323147,+#_e497681bc51fc4d66aeaf2f61ecef052 | p@chr12:79323118..79323147, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr17:39675898..39675905,-#_e497681bc51fc4d66aeaf2f61ecef052 | p@chr17:39675898..39675905, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr15:22921497..22921508,+#_e497681bc51fc4d66aeaf2f61ecef052 | p9@CYFIP1 |
| 3.1e-50 | FFCP PHASE1:Hg19::chr19:38626087..38626092,+#_e497681bc51fc4d66aeaf2f61ecef052 | p@chr19:38626087..38626092, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr2:61242126..61242129,-#_e497681bc51fc4d66aeaf2f61ecef052 | p@chr2:61242126..61242129, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr10:128111291..128111299,-#_e497681bc51fc4d66aeaf2f61ecef052 | p@chr10:128111291..128111299, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr20:33734472..33734476,-#_e497681bc51fc4d66aeaf2f61ecef052 | p@chr20:33734472..33734476, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr16:57935528..57935532,-#_e497681bc51fc4d66aeaf2f61ecef052 | p@chr16:57935528..57935532, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr20:33532237..33532241,-#_e497681bc51fc4d66aeaf2f61ecef052 | p@chr20:33532237..33532241, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr17:39675898..39675905,-#_e497681bc51fc4d66aeaf2f61ecef052 | p@chr17:39675898..39675905, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr15:79327658..79327669,-#_e497681bc51fc4d66aeaf2f61ecef052 | p@chr15:79327658..79327669, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr15:79327671..79327679,-#_e497681bc51fc4d66aeaf2f61ecef052 | p@chr15:79327671..79327679, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr16:57935528..57935532,-#_e497681bc51fc4d66aeaf2f61ecef052 | p@chr16:57935528..57935532, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr8:41575054..41575088,-#_e497681bc51fc4d66aeaf2f61ecef052 | p@chr8:41575054..41575088, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr2:61242126..61242129,-#_e497681bc51fc4d66aeaf2f61ecef052 | p@chr2:61242126..61242129, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr5:150951027..150951036,-#_e497681bc51fc4d66aeaf2f61ecef052 | p@chr5:150951027..150951036, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr8:104890366..104890371,+#_e497681bc51fc4d66aeaf2f61ecef052 | p@chr8:104890366..104890371, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr1:96208925..96208927,+#_e497681bc51fc4d66aeaf2f61ecef052 | p@chr1:96208925..96208927, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr8:71613745..71613750,-#_e497681bc51fc4d66aeaf2f61ecef052 | p@chr8:71613745..71613750, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr15:22921497..22921508,+#_e497681bc51fc4d66aeaf2f61ecef052 | p9@CYFIP1 |
| 3.1e-50 | FFCP PHASE2:Hg19::chr12:4116249..4116260,+#_e497681bc51fc4d66aeaf2f61ecef052 | p@chr12:4116249..4116260, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr9:135936872..135936875,+#_e497681bc51fc4d66aeaf2f61ecef052 | p6@CEL |
| 3.1e-50 | FFCP PHASE1:Hg19::chr3:59175564..59175565,+#_e497681bc51fc4d66aeaf2f61ecef052 | p@chr3:59175564..59175565, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr7:106415430..106415437,+#_e497681bc51fc4d66aeaf2f61ecef052 | p2@ENST00000490162 |
| 3.1e-50 | FFCP PHASE1:Hg19::chr6:102844491..102844494,+#_e497681bc51fc4d66aeaf2f61ecef052 | p@chr6:102844491..102844494, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr2:61242131..61242134,-#_e497681bc51fc4d66aeaf2f61ecef052 | p@chr2:61242131..61242134, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr14:81036045..81036050,-#_e497681bc51fc4d66aeaf2f61ecef052 | p@chr14:81036045..81036050, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr16:50451403..50451407,-#_e497681bc51fc4d66aeaf2f61ecef052 | p@chr16:50451403..50451407, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr9:137272217..137272225,+#_e497681bc51fc4d66aeaf2f61ecef052 | p@chr9:137272217..137272225, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr9:135936872..135936875,+#_e497681bc51fc4d66aeaf2f61ecef052 | p6@CEL |
| 3.1e-50 | FFCP PHASE2:Hg19::chrX:105936968..105936975,+#_e497681bc51fc4d66aeaf2f61ecef052 | p11@RNF128 |
| 3.1e-50 | FFCP PHASE2:Hg19::chr2:150999864..150999872,+#_e497681bc51fc4d66aeaf2f61ecef052 | p@chr2:150999864..150999872, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr20:33734472..33734476,-#_e497681bc51fc4d66aeaf2f61ecef052 | p@chr20:33734472..33734476, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr15:79327671..79327679,-#_e497681bc51fc4d66aeaf2f61ecef052 | p@chr15:79327671..79327679, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr10:128111291..128111299,-#_e497681bc51fc4d66aeaf2f61ecef052 | p@chr10:128111291..128111299, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr2:61242131..61242134,-#_e497681bc51fc4d66aeaf2f61ecef052 | p@chr2:61242131..61242134, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr6:123728153..123728175,-#_e497681bc51fc4d66aeaf2f61ecef052 | p@chr6:123728153..123728175, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr8:41575054..41575088,-#_e497681bc51fc4d66aeaf2f61ecef052 | p@chr8:41575054..41575088, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr14:81036045..81036050,-#_e497681bc51fc4d66aeaf2f61ecef052 | p@chr14:81036045..81036050, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr8:104890366..104890371,+#_e497681bc51fc4d66aeaf2f61ecef052 | p@chr8:104890366..104890371, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr9:98532075..98532082,+#_e497681bc51fc4d66aeaf2f61ecef052 | p@chr9:98532075..98532082, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr16:57935418..57935429,-#_e497681bc51fc4d66aeaf2f61ecef052 | p@chr16:57935418..57935429, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr20:60736437..60736455,-#_e497681bc51fc4d66aeaf2f61ecef052 | p@chr20:60736437..60736455, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr7:106415430..106415437,+#_e497681bc51fc4d66aeaf2f61ecef052 | p2@ENST00000490162 |
| 3.1e-50 | FFCP PHASE2:Hg19::chr16:57935418..57935429,-#_e497681bc51fc4d66aeaf2f61ecef052 | p@chr16:57935418..57935429, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr12:4116249..4116260,+#_e497681bc51fc4d66aeaf2f61ecef052 | p@chr12:4116249..4116260, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr6:123728153..123728175,-#_e497681bc51fc4d66aeaf2f61ecef052 | p@chr6:123728153..123728175, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr10:101445599..101445602,+#_e497681bc51fc4d66aeaf2f61ecef052 | p@chr10:101445599..101445602, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr9:137272217..137272225,+#_e497681bc51fc4d66aeaf2f61ecef052 | p@chr9:137272217..137272225, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chrX:105936968..105936975,+#_e497681bc51fc4d66aeaf2f61ecef052 | p11@RNF128 |
| 3.1e-50 | FFCP PHASE1:Hg19::chr2:150999864..150999872,+#_e497681bc51fc4d66aeaf2f61ecef052 | p@chr2:150999864..150999872, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr12:79323118..79323147,+#_e497681bc51fc4d66aeaf2f61ecef052 | p@chr12:79323118..79323147, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr16:57935435..57935447,-#_e497681bc51fc4d66aeaf2f61ecef052 | p@chr16:57935435..57935447, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr16:50451403..50451407,-#_e497681bc51fc4d66aeaf2f61ecef052 | p@chr16:50451403..50451407, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr16:57935435..57935447,-#_e497681bc51fc4d66aeaf2f61ecef052 | p@chr16:57935435..57935447, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr3:54660709..54660712,-#_e497681bc51fc4d66aeaf2f61ecef052 | p@chr3:54660709..54660712, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr6:125314790..125314796,+#_e497681bc51fc4d66aeaf2f61ecef052 | p@chr6:125314790..125314796, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr20:60736437..60736455,-#_e497681bc51fc4d66aeaf2f61ecef052 | p@chr20:60736437..60736455, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr19:38626087..38626092,+#_e497681bc51fc4d66aeaf2f61ecef052 | p@chr19:38626087..38626092, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr9:98532075..98532082,+#_e497681bc51fc4d66aeaf2f61ecef052 | p@chr9:98532075..98532082, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr2:61242118..61242125,-#_e497681bc51fc4d66aeaf2f61ecef052 | p@chr2:61242118..61242125, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr20:33532237..33532241,-#_e497681bc51fc4d66aeaf2f61ecef052 | p@chr20:33532237..33532241, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr6:125314790..125314796,+#_e497681bc51fc4d66aeaf2f61ecef052 | p@chr6:125314790..125314796, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr10:101445599..101445602,+#_e497681bc51fc4d66aeaf2f61ecef052 | p@chr10:101445599..101445602, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr5:150951027..150951036,-#_e497681bc51fc4d66aeaf2f61ecef052 | p@chr5:150951027..150951036, - |
| 3.11e-50 | FFCP PHASE1:Hg19::chr6:83104756..83104776,+#_fcd08fc2eda5ae91f3e5e13b86ff1ee9 | p@chr6:83104756..83104776, + |
| 3.11e-50 | FFCP PHASE2:Hg19::chr6:83104756..83104776,+#_fcd08fc2eda5ae91f3e5e13b86ff1ee9 | p@chr6:83104756..83104776, + |
| 5.14e-50 | FFCP PHASE1:Hg19::chr5:52552631..52552636,-#_a6e24f02dd0f96ba8b0e445d42512ba8 | p@chr5:52552631..52552636, - |
| 5.14e-50 | FFCP PHASE2:Hg19::chr5:52552631..52552636,-#_a6e24f02dd0f96ba8b0e445d42512ba8 | p@chr5:52552631..52552636, - |
| 8.47e-50 | FFCP PHASE2:Hg19::chr14:23607321..23607333,-#_d67adeb58b28df2df4994cc2af7be836 | p29@SLC7A8 |
| 8.47e-50 | FFCP PHASE1:Hg19::chr14:23607321..23607333,-#_d67adeb58b28df2df4994cc2af7be836 | p29@SLC7A8 |
| 5.41e-48 | FFCP PHASE2:Hg19::chr5:150998590..150998611,-#_095130d0f290160184b13270ce0a946f | p@chr5:150998590..150998611, - |
| 5.41e-48 | FFCP PHASE1:Hg19::chr5:150998590..150998611,-#_095130d0f290160184b13270ce0a946f | p@chr5:150998590..150998611, - |
| 1.48e-40 | FFCP PHASE2:Hg19::chr8:144414013..144414023,-#_0cda4f6e01edbc2716bc07a0284f9e3e | p8@TOP1MT |
| 1.48e-40 | FFCP PHASE2:Hg19::chr3:50308296..50308307,+#_0cda4f6e01edbc2716bc07a0284f9e3e | p9@SEMA3B |
| 1.48e-40 | FFCP PHASE1:Hg19::chr8:144414013..144414023,-#_0cda4f6e01edbc2716bc07a0284f9e3e | p8@TOP1MT |
| 1.48e-40 | FFCP PHASE2:Hg19::chr9:124462976..124462986,+#_0cda4f6e01edbc2716bc07a0284f9e3e | p@chr9:124462976..124462986, + |
| 1.48e-40 | FFCP PHASE1:Hg19::chr3:50308296..50308307,+#_0cda4f6e01edbc2716bc07a0284f9e3e | p9@SEMA3B |
| 1.48e-40 | FFCP PHASE1:Hg19::chr9:124462976..124462986,+#_0cda4f6e01edbc2716bc07a0284f9e3e | p@chr9:124462976..124462986, + |
| 1.94e-40 | FFCP PHASE2:Hg19::chr1:209945462..209945477,-#_a2bfa9153b491013c1b6e959e1a18695 | p@chr1:209945462..209945477, - |
| 1.94e-40 | FFCP PHASE1:Hg19::chr1:209945462..209945477,-#_a2bfa9153b491013c1b6e959e1a18695 | p@chr1:209945462..209945477, - |
| 2.22e-40 | FFCP PHASE2:Hg19::chr4:8338553..8338559,+#_97ee51771b3e22f9f9f08f978787e036 | p@chr4:8338553..8338559, + |
| 2.22e-40 | FFCP PHASE2:Hg19::chr7:55270422..55270434,+#_97ee51771b3e22f9f9f08f978787e036 | p@chr7:55270422..55270434, + |
| 2.22e-40 | FFCP PHASE1:Hg19::chr4:8338553..8338559,+#_97ee51771b3e22f9f9f08f978787e036 | p@chr4:8338553..8338559, + |
| 2.22e-40 | FFCP PHASE1:Hg19::chr7:55270422..55270434,+#_97ee51771b3e22f9f9f08f978787e036 | p@chr7:55270422..55270434, + |
| 2.71e-40 | FFCP PHASE1:Hg19::chr10:54367116..54367120,+#_4d78ffc999a8649931c15c59609f09c8 | p@chr10:54367116..54367120, + |
| 2.71e-40 | FFCP PHASE2:Hg19::chr10:54367116..54367120,+#_4d78ffc999a8649931c15c59609f09c8 | p@chr10:54367116..54367120, + |
