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{{UBERON
{{UBERON
|id=UBERON:0002073
|alt_id=UBERON:FMA_70660-MA_0000154
|name=hair follicle
|namespace=
|def="a tube-like opening in the epidermis where the hair shaft develops and into which the sebaceous glands open[GO]." [Wikipedia:Hair_follicle]
|xref=BTO:0000554;;EFO:0002464;;EMAPA:29741;;EV:0100156;;FMA:70660;;GAID:934;;MA:0000154;;MESH:A.10.272.497.500;;ncithesaurus:Hair_Follicle;;OpenCyc:Mx4rvVjOI5wpEbGdrcN5Y29ycA;;SCTID:280830006;;VHOG:0001268
|is_a=UBERON:0000062;;UBERON:0004121
|synonym="vibrissa follicle" RELATED [MP:0010234]
|comment=TODO - add new class for MA:0002910 vibrissa follicle
|comment=TODO - add new class for MA:0002910 vibrissa follicle
|alt_id=UBERON:FMA_70660-MA_0000154
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="a tube-like opening in the epidermis where the hair shaft develops and into which the sebaceous glands open[GO]." [Wikipedia:Hair_follicle]
|subset=organ_slim;;uberon_slim
|adjacent_to=
|derives_from=
|derives_from=
|develops_from=UBERON:0005086
|develops_from=UBERON:0005086
|disjoint_from=
|has_quality=
|has_quality=
|id=UBERON:0002073
|is_a=UBERON:0000064 ;;UBERON:0004121 ;;UBERON:0010314
|is_obsolete=
|located_in=
|located_in=
|part_of=UBERON:0001003
|name=hair follicle
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.obo.owl;;IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|namespace=FANTOM
|is_obsolete=
|obo_creation_date=
|part_of=UBERON:0001003;;UBERON:0011932
|preceded_by=
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.owl;;IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|subset=organ_slim;;uberon_slim
|synonym="folliculus pili" RELATED LATIN [Wikipedia:Hair_follicle];;"vibrissa follicle" RELATED [MP:0010234]
|union_of=
|xref=BTO:0000554;;EFO:0002464;;EMAPA:29741;;EV:0100156;;FMA:70660;;GAID:934;;http://upload.wikimedia.org/wikipedia/commons/4/4d/Hair_follicle-en.svg;;MA:0000154;;MESH:A.10.272.497.500;;ncithesaurus:Hair_Follicle;;OpenCyc:Mx4rvVjOI5wpEbGdrcN5Y29ycA;;SCTID:280830006;;VHOG:0001268
}}
}}

Latest revision as of 17:25, 12 September 2014

Name:hair follicle
Namespace:FANTOM
Definition:"a tube-like opening in the epidermis where the hair shaft develops and into which the sebaceous glands open[GO]." [Wikipedia:Hair_follicle]
Xrefs:
links:

BTO:0000554
EFO:0002464
EMAPA:29741
EV:0100156
FMA:70660
GAID:934
[1]
MA:0000154
MESH:A.10.272.497.500
ncithesaurus:Hair_Follicle
OpenCyc:Mx4rvVjOI5wpEbGdrcN5Y29ycA
SCTID:280830006

VHOG:0001268
Synonyms: "folliculus pili" RELATED LATIN [Wikipedia:Hair_follicle]
"vibrissa follicle" RELATED [MP:0010234]
Comments:TODO - add new class for MA:0002910 vibrissa follicle
Alt_id: UBERON:FMA_70660-MA_0000154
Subset: organ_slim
uberon_slim

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0000064(organ part),UBERON:0004121(ectoderm-derived structure),UBERON:0010314(structure with developmental contribution from neural crest)
develops_from:UBERON:0005086(hair follicle placode)
part_of:UBERON:0001003(skin epidermis),UBERON:0011932(pilosebaceous unit)



Children

is a:FF:0011174 (Skin - armpit hair follicle)
part of:CL:0002559 (hair follicle cell),UBERON:0005932 (bulb of hair follicle)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

Human (Homo sapiens)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0002073 (hair follicle), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
1.48e-40FFCP PHASE1:Hg19::chr7:127963997..127964004,-#_c015d28145f65b5eed831b94b431a085p@chr7:127963997..127964004, -
1.48e-40FFCP PHASE2:Hg19::chr7:127963997..127964004,-#_c015d28145f65b5eed831b94b431a085p@chr7:127963997..127964004, -
3.31e-40FFCP PHASE2:Hg19::chr16:85617034..85617043,-#_114b617f474109e0b80d01812b4abcc1p@chr16:85617034..85617043, -
3.31e-40FFCP PHASE1:Hg19::chr16:85617034..85617043,-#_114b617f474109e0b80d01812b4abcc1p@chr16:85617034..85617043, -
4.05e-40FFCP PHASE2:Hg19::chr3:4723000..4723006,+#_b0a9ce7f48be9b51d5128f9f62fa028ap@chr3:4723000..4723006, +
4.05e-40FFCP PHASE1:Hg19::chr5:174252850..174252859,+#_b0a9ce7f48be9b51d5128f9f62fa028ap@chr5:174252850..174252859, +
4.05e-40FFCP PHASE2:Hg19::chr5:174252850..174252859,+#_b0a9ce7f48be9b51d5128f9f62fa028ap@chr5:174252850..174252859, +
4.05e-40FFCP PHASE1:Hg19::chr3:4723000..4723006,+#_b0a9ce7f48be9b51d5128f9f62fa028ap@chr3:4723000..4723006, +
9.7e-37FFCP PHASE2:Hg19::chr20:940152..940156,-#_69be01acd67eaf6e7615685ae67f3e9ep@chr20:940152..940156, -
9.7e-37FFCP PHASE1:Hg19::chr20:940152..940156,-#_69be01acd67eaf6e7615685ae67f3e9ep@chr20:940152..940156, -
3.25e-36FFCP PHASE1:Hg19::chr1:119530682..119530692,-#_2e36ec356c082b8cab400ec59e9d341ep10@TBX15
3.25e-36FFCP PHASE2:Hg19::chr1:119530682..119530692,-#_2e36ec356c082b8cab400ec59e9d341ep10@TBX15
4.66e-36FFCP PHASE2:Hg19::chr17:73682761..73682766,+#_1cb0e26b2978097fb342f156fd5b50e0p@chr17:73682761..73682766, +
4.66e-36FFCP PHASE1:Hg19::chr17:73682761..73682766,+#_1cb0e26b2978097fb342f156fd5b50e0p@chr17:73682761..73682766, +
1.44e-32FFCP PHASE2:Hg19::chr9:132337391..132337396,+#_3582973e7977090934f09a0cdfd9fb3bp2@ENST00000443993, p2@uc004bya.1
1.44e-32FFCP PHASE2:Hg19::chr1:8950583..8950588,+#_3582973e7977090934f09a0cdfd9fb3bp@chr1:8950583..8950588, +
1.44e-32FFCP PHASE1:Hg19::chr1:8950583..8950588,+#_3582973e7977090934f09a0cdfd9fb3bp@chr1:8950583..8950588, +
1.44e-32FFCP PHASE1:Hg19::chr9:132337391..132337396,+#_3582973e7977090934f09a0cdfd9fb3bp2@ENST00000443993, p2@uc004bya.1
1.7e-32FFCP PHASE1:Hg19::chr12:5198401..5198415,+#_d9bf96a80df3bbb2bb39ecb2996a40edp@chr12:5198401..5198415, +
1.7e-32FFCP PHASE1:Hg19::chr12:2163623..2163634,+#_d9bf96a80df3bbb2bb39ecb2996a40edp@chr12:2163623..2163634, +
1.7e-32FFCP PHASE2:Hg19::chr12:5198401..5198415,+#_d9bf96a80df3bbb2bb39ecb2996a40edp@chr12:5198401..5198415, +
1.7e-32FFCP PHASE2:Hg19::chr12:2163623..2163634,+#_d9bf96a80df3bbb2bb39ecb2996a40edp@chr12:2163623..2163634, +
2.86e-30FFCP PHASE2:Hg19::chr7:142563953..142563963,+#_de23cb55eb970dcc0cd1686c0d236e02p@chr7:142563953..142563963, +
2.86e-30FFCP PHASE1:Hg19::chr7:142563953..142563963,+#_de23cb55eb970dcc0cd1686c0d236e02p@chr7:142563953..142563963, +
3.66e-28FFCP PHASE2:Hg19::chr15:80842979..80842998,+#_116d6c26ebef9954b211d69e61535618p20@ARNT2
3.66e-28FFCP PHASE1:Hg19::chr15:80842979..80842998,+#_116d6c26ebef9954b211d69e61535618p20@ARNT2
3.91e-28FFCP PHASE1:Hg19::chr9:89892210..89892234,-#_80a51386f5c756817ee3fc47b0932aeep@chr9:89892210..89892234, -
3.91e-28FFCP PHASE2:Hg19::chr9:89892210..89892234,-#_80a51386f5c756817ee3fc47b0932aeep@chr9:89892210..89892234, -
7.91e-28FFCP PHASE1:Hg19::chr2:119605374..119605377,-#_9da798cd197adb0913005560f0920c0fp7@EN1
7.91e-28FFCP PHASE2:Hg19::chr2:119605374..119605377,-#_9da798cd197adb0913005560f0920c0fp7@EN1
2.72e-27FFCP PHASE1:Hg19::chr16:85617044..85617059,-#_4c1682f611d8d2ce4d30ae048a215d0bp@chr16:85617044..85617059, -
2.72e-27FFCP PHASE1:Hg19::chr10:15760985..15760992,-#_4c1682f611d8d2ce4d30ae048a215d0bp@chr10:15760985..15760992, -
2.72e-27FFCP PHASE2:Hg19::chr16:85617044..85617059,-#_4c1682f611d8d2ce4d30ae048a215d0bp@chr16:85617044..85617059, -
2.72e-27FFCP PHASE2:Hg19::chr10:15760985..15760992,-#_4c1682f611d8d2ce4d30ae048a215d0bp@chr10:15760985..15760992, -
4.63e-27FFCP PHASE2:Hg19::chr12:56224522..56224535,-#_1832170f080178fd3e736b1d78266a69p7@DNAJC14
4.63e-27FFCP PHASE1:Hg19::chr12:56224522..56224535,-#_1832170f080178fd3e736b1d78266a69p7@DNAJC14
1.85e-26FFCP PHASE2:Hg19::chr18:8747536..8747542,-#_96491d6d7420656cfa46d2e3c0a3a6e5p@chr18:8747536..8747542, -
1.85e-26FFCP PHASE1:Hg19::chr18:8747536..8747542,-#_96491d6d7420656cfa46d2e3c0a3a6e5p@chr18:8747536..8747542, -
1.48e-25FFCP PHASE1:Hg19::chr2:119605253..119605264,-#_f91dbd582c5eb3d8ce84020b3e9a6742p5@EN1
1.48e-25FFCP PHASE2:Hg19::chr2:119605253..119605264,-#_f91dbd582c5eb3d8ce84020b3e9a6742p5@EN1
1.2e-24FFCP PHASE1:Hg19::chr11:121896688..121896697,-#_6b93b3c46d58abc454f41d8e16b2a42cp@chr11:121896688..121896697, -
1.2e-24FFCP PHASE2:Hg19::chr11:121896688..121896697,-#_6b93b3c46d58abc454f41d8e16b2a42cp@chr11:121896688..121896697, -
1.35e-24FFCP PHASE1:Hg19::chr15:90348431..90348458,-#_3664f69fb2fd0b7393094bfcca1a58ebp17@ANPEP
1.35e-24FFCP PHASE2:Hg19::chr15:90348431..90348458,-#_3664f69fb2fd0b7393094bfcca1a58ebp17@ANPEP
1.02e-23FFCP PHASE2:Hg19::chr15:39534820..39534834,+#_d0061af3168c68039949b89cfd5b7699p@chr15:39534820..39534834, +
1.02e-23FFCP PHASE1:Hg19::chr15:39534820..39534834,+#_d0061af3168c68039949b89cfd5b7699p@chr15:39534820..39534834, +
1.14e-23FFCP PHASE2:Hg19::chr2:238153616..238153621,-#_2b9e384a8fbfc6e300583565bbd1f7ddp@chr2:238153616..238153621, -
1.14e-23FFCP PHASE1:Hg19::chr2:238153616..238153621,-#_2b9e384a8fbfc6e300583565bbd1f7ddp@chr2:238153616..238153621, -
1.61e-23FFCP PHASE1:Hg19::chr3:147109858..147109861,+#_6409aae17e0ab712a66c2c3802e6ad51p@chr3:147109858..147109861, +
1.61e-23FFCP PHASE2:Hg19::chr3:147109858..147109861,+#_6409aae17e0ab712a66c2c3802e6ad51p@chr3:147109858..147109861, +
1.81e-23FFCP PHASE2:Hg19::chr3:147128048..147128057,+#_bd3be5d499343d7f5cca6b023d3123c6p4@AB464362
1.81e-23FFCP PHASE1:Hg19::chr3:147128048..147128057,+#_bd3be5d499343d7f5cca6b023d3123c6p4@AB464362
2.77e-23FFCP PHASE1:Hg19::chr3:147112699..147112713,-#_da2cafd6013b5b959d472e78590c8d9ap@chr3:147112699..147112713, -
2.77e-23FFCP PHASE2:Hg19::chr3:147112699..147112713,-#_da2cafd6013b5b959d472e78590c8d9ap@chr3:147112699..147112713, -
3.75e-23FFCP PHASE1:Hg19::chr21:47405885..47405896,+#_c0df9c639392b3c438b340ce86d29250p@chr21:47405885..47405896, +
3.75e-23FFCP PHASE2:Hg19::chr21:47405885..47405896,+#_c0df9c639392b3c438b340ce86d29250p@chr21:47405885..47405896, +
5.46e-23FFCP PHASE2:Hg19::chr15:80800274..80800278,-#_f65cab9c54dda6b27cb407824c9435cfp@chr15:80800274..80800278, -
5.46e-23FFCP PHASE1:Hg19::chr15:80800274..80800278,-#_f65cab9c54dda6b27cb407824c9435cfp@chr15:80800274..80800278, -
8.54e-23FFCP PHASE2:Hg19::chr6:5498703..5498727,+#_e6457b8376d059f3175af7f827937b1fp@chr6:5498703..5498727, +
8.54e-23FFCP PHASE1:Hg19::chr6:5498703..5498727,+#_e6457b8376d059f3175af7f827937b1fp@chr6:5498703..5498727, +
3.99e-22FFCP PHASE2:Hg19::chr2:119605233..119605245,-#_b1edf89ed1a072ce3d78f5f4beece698p8@EN1
3.99e-22FFCP PHASE1:Hg19::chr2:119605233..119605245,-#_b1edf89ed1a072ce3d78f5f4beece698p8@EN1
5.15e-21FFCP PHASE2:Hg19::chr20:55403726..55403730,+#_2c203bc05179e6b888462ae1191eb4b9p@chr20:55403726..55403730, +
5.15e-21FFCP PHASE2:Hg19::chr12:69754026..69754035,+#_2c203bc05179e6b888462ae1191eb4b9p@chr12:69754026..69754035, +
5.15e-21FFCP PHASE2:Hg19::chr13:114108115..114108122,-#_2c203bc05179e6b888462ae1191eb4b9p13@ADPRHL1
5.15e-21FFCP PHASE1:Hg19::chr7:93928562..93928567,+#_2c203bc05179e6b888462ae1191eb4b9p@chr7:93928562..93928567, +
5.15e-21FFCP PHASE1:Hg19::chr13:50654430..50654438,+#_2c203bc05179e6b888462ae1191eb4b9p@chr13:50654430..50654438, +
5.15e-21FFCP PHASE2:Hg19::chr9:88939319..88939326,-#_2c203bc05179e6b888462ae1191eb4b9p25@ZCCHC6
5.15e-21FFCP PHASE2:Hg19::chr9:3330877..3330914,-#_2c203bc05179e6b888462ae1191eb4b9p@chr9:3330877..3330914, -
5.15e-21FFCP PHASE1:Hg19::chr5:53358788..53358795,-#_2c203bc05179e6b888462ae1191eb4b9p@chr5:53358788..53358795, -
5.15e-21FFCP PHASE1:Hg19::chr11:118789349..118789355,+#_2c203bc05179e6b888462ae1191eb4b9p@chr11:118789349..118789355, +
5.15e-21FFCP PHASE2:Hg19::chr13:45914842..45914847,-#_2c203bc05179e6b888462ae1191eb4b9p14@TPT1
5.15e-21FFCP PHASE2:Hg19::chr8:23210765..23210805,+#_2c203bc05179e6b888462ae1191eb4b9p@chr8:23210765..23210805, +
5.15e-21FFCP PHASE1:Hg19::chr5:150398982..150399013,-#_2c203bc05179e6b888462ae1191eb4b9p@chr5:150398982..150399013, -
5.15e-21FFCP PHASE1:Hg19::chr3:124485247..124485272,-#_2c203bc05179e6b888462ae1191eb4b9p@chr3:124485247..124485272, -
5.15e-21FFCP PHASE1:Hg19::chr4:151246994..151247003,-#_2c203bc05179e6b888462ae1191eb4b9p@chr4:151246994..151247003, -
5.15e-21FFCP PHASE1:Hg19::chr13:30075330..30075333,+#_2c203bc05179e6b888462ae1191eb4b9p@chr13:30075330..30075333, +
5.15e-21FFCP PHASE1:Hg19::chr6:26305727..26305730,-#_2c203bc05179e6b888462ae1191eb4b9p@chr6:26305727..26305730, -
5.15e-21FFCP PHASE1:Hg19::chr11:6341147..6341156,-#_2c203bc05179e6b888462ae1191eb4b9p14@PRKCDBP
5.15e-21FFCP PHASE2:Hg19::chr11:118789349..118789355,+#_2c203bc05179e6b888462ae1191eb4b9p@chr11:118789349..118789355, +
5.15e-21FFCP PHASE1:Hg19::chr12:69754026..69754035,+#_2c203bc05179e6b888462ae1191eb4b9p@chr12:69754026..69754035, +
5.15e-21FFCP PHASE1:Hg19::chr9:35748867..35748868,-#_2c203bc05179e6b888462ae1191eb4b9p13@GBA2
5.15e-21FFCP PHASE1:Hg19::chr20:55403726..55403730,+#_2c203bc05179e6b888462ae1191eb4b9p@chr20:55403726..55403730, +
5.15e-21FFCP PHASE2:Hg19::chr15:40773537..40773544,-#_2c203bc05179e6b888462ae1191eb4b9p1@ENST00000489027
5.15e-21FFCP PHASE1:Hg19::chr13:114108115..114108122,-#_2c203bc05179e6b888462ae1191eb4b9p13@ADPRHL1
5.15e-21FFCP PHASE1:Hg19::chr6:168333065..168333071,+#_2c203bc05179e6b888462ae1191eb4b9p33@MLLT4
5.15e-21FFCP PHASE2:Hg19::chr2:30864461..30864472,+#_2c203bc05179e6b888462ae1191eb4b9p11@LCLAT1
5.15e-21FFCP PHASE2:Hg19::chr11:6341147..6341156,-#_2c203bc05179e6b888462ae1191eb4b9p14@PRKCDBP
5.15e-21FFCP PHASE1:Hg19::chr10:90750010..90750015,+#_2c203bc05179e6b888462ae1191eb4b9p15@FAS
5.15e-21FFCP PHASE2:Hg19::chr7:93928562..93928567,+#_2c203bc05179e6b888462ae1191eb4b9p@chr7:93928562..93928567, +
5.15e-21FFCP PHASE2:Hg19::chr10:90750010..90750015,+#_2c203bc05179e6b888462ae1191eb4b9p15@FAS
5.15e-21FFCP PHASE1:Hg19::chr13:45914842..45914847,-#_2c203bc05179e6b888462ae1191eb4b9p14@TPT1
5.15e-21FFCP PHASE2:Hg19::chr5:53358788..53358795,-#_2c203bc05179e6b888462ae1191eb4b9p@chr5:53358788..53358795, -
5.15e-21FFCP PHASE1:Hg19::chr15:40773537..40773544,-#_2c203bc05179e6b888462ae1191eb4b9p1@ENST00000489027
5.15e-21FFCP PHASE2:Hg19::chr13:50654430..50654438,+#_2c203bc05179e6b888462ae1191eb4b9p@chr13:50654430..50654438, +
5.15e-21FFCP PHASE1:Hg19::chr9:88939319..88939326,-#_2c203bc05179e6b888462ae1191eb4b9p25@ZCCHC6
5.15e-21FFCP PHASE2:Hg19::chr3:124485247..124485272,-#_2c203bc05179e6b888462ae1191eb4b9p@chr3:124485247..124485272, -
5.15e-21FFCP PHASE2:Hg19::chr6:26305727..26305730,-#_2c203bc05179e6b888462ae1191eb4b9p@chr6:26305727..26305730, -
5.15e-21FFCP PHASE1:Hg19::chr9:3330877..3330914,-#_2c203bc05179e6b888462ae1191eb4b9p@chr9:3330877..3330914, -
5.15e-21FFCP PHASE2:Hg19::chr9:35748867..35748868,-#_2c203bc05179e6b888462ae1191eb4b9p13@GBA2

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