Personal tools

UBERON:0001736: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(4 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{UBERON
{{UBERON
|id=UBERON:0001736
|alt_id=UBERON:FMA_55093-MA_0001589
|name=submandibular gland
|anatomical_img_id=FMA:55093
|namespace=
|def="The paired submandibular glands (submaxillary glands) are salivary glands located beneath the floor of the mouth. In humans, they account for 70% of the salivary volume and weigh about 15 grams. [WP,unvetted]." [Wikipedia:Submandibular_gland]
|xref=BTO:0001316;;EFO:0001387;;EMAPA:18812;;EV:0100061;;FMA:55093;;GAID:942;;http://upload.wikimedia.org/wikipedia/commons/thumb/5/51/Illu_quiz_hn_02.jpg/200px-Illu_quiz_hn_02.jpg;;MA:0001589;;MESH:A.10.336.779.812;;ncithesaurus:Submandibular_Gland;;SCTID:181235001;;VHOG:0000364
|is_a=UBERON:0001829
|synonym="submandibular salivary gland" RELATED [];;"submaxillary gland" RELATED []
|comment=TODO check SSG vs SG
|comment=TODO check SSG vs SG
|alt_id=UBERON:FMA_55093-MA_0001589
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="The paired submandibular glands (submaxillary glands) are salivary glands located beneath the floor of the mouth. In humans, they account for 70% of the salivary volume and weigh about 15 grams. [WP,unvetted]." [Wikipedia:Submandibular_gland]
|subset=uberon_slim
|adjacent_to=
|derives_from=
|derives_from=
|develops_from=UBERON:0006298
|develops_from=UBERON:0006298
|disjoint_from=
|has_quality=
|has_quality=
|id=UBERON:0001736
|is_a=UBERON:0001829 ;;UBERON:0004119 ;;UBERON:0010314
|is_obsolete=
|located_in=
|located_in=
|name=submandibular gland
|namespace=FANTOM
|obo_creation_date=
|part_of=
|part_of=
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|subset=uberon_slim
|preceded_by=
|synonym="glandula submandibularis" RELATED LATIN [Wikipedia:Submandibular_gland];;"submandibular salivary gland" RELATED [];;"submaxillary gland" RELATED []
|union_of=
|xref=BTO:0001316;;EFO:0001387;;EMAPA:18812;;EV:0100061;;FMA:55093;;GAID:942;;http://upload.wikimedia.org/wikipedia/commons/5/51/Illu_quiz_hn_02.jpg;;http://upload.wikimedia.org/wikipedia/commons/thumb/5/51/Illu_quiz_hn_02.jpg/200px-Illu_quiz_hn_02.jpg;;MA:0001589;;MESH:A.10.336.779.812;;ncithesaurus:Submandibular_Gland;;SCTID:181235001;;VHOG:0000364
}}
}}

Latest revision as of 17:20, 12 September 2014

Name:submandibular gland
Namespace:FANTOM
Definition:"The paired submandibular glands (submaxillary glands) are salivary glands located beneath the floor of the mouth. In humans, they account for 70% of the salivary volume and weigh about 15 grams. [WP,unvetted]." [Wikipedia:Submandibular_gland]
Xrefs:
links:

BTO:0001316
EFO:0001387
EMAPA:18812
EV:0100061
FMA:55093
GAID:942
[1]
[2]
MA:0001589
MESH:A.10.336.779.812
ncithesaurus:Submandibular_Gland
SCTID:181235001

VHOG:0000364
Synonyms: "glandula submandibularis" RELATED LATIN [Wikipedia:Submandibular_gland]
"submandibular salivary gland" RELATED []
"submaxillary gland" RELATED []
Comments:TODO check SSG vs SG
Alt_id: UBERON:FMA_55093-MA_0001589
Subset: uberon_slim

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0001829(major salivary gland),UBERON:0004119(endoderm-derived structure),UBERON:0010314(structure with developmental contribution from neural crest)
develops_from:UBERON:0006298(submandibular gland primordium)



Children

derives from:FF:0010202 (human submaxillary gland - adult sample),FF:0011388 (mouse submandibular gland- adult sample)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

Human (Homo sapiens)

Mouse (Mus musculus)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0001736 (submandibular gland), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
9.37e-99FFCP PHASE1:Hg19::chr20:23807100..23807107,+#_3d8304846a709a9f884f6e356710b8b6p@chr20:23807100..23807107, +
9.37e-99FFCP PHASE1:Hg19::chr16:2881904..2881905,+#_3d8304846a709a9f884f6e356710b8b6p@chr16:2881904..2881905, +
9.37e-99FFCP PHASE2:Hg19::chr20:23807100..23807107,+#_3d8304846a709a9f884f6e356710b8b6p@chr20:23807100..23807107, +
9.37e-99FFCP PHASE1:Hg19::chr20:23728474..23728479,-#_3d8304846a709a9f884f6e356710b8b6p@chr20:23728474..23728479, -
9.37e-99FFCP PHASE2:Hg19::chr20:23728474..23728479,-#_3d8304846a709a9f884f6e356710b8b6p@chr20:23728474..23728479, -
9.37e-99FFCP PHASE1:Hg19::chr1:9030951..9030957,+#_3d8304846a709a9f884f6e356710b8b6p@chr1:9030951..9030957, +
9.37e-99FFCP PHASE2:Hg19::chr1:9030951..9030957,+#_3d8304846a709a9f884f6e356710b8b6p@chr1:9030951..9030957, +
9.37e-99FFCP PHASE2:Hg19::chr16:2881904..2881905,+#_3d8304846a709a9f884f6e356710b8b6p@chr16:2881904..2881905, +
9.37e-99FFCP PHASE1:Hg19::chr1:9027737..9027744,+#_3d8304846a709a9f884f6e356710b8b6p@chr1:9027737..9027744, +
9.37e-99FFCP PHASE2:Hg19::chr1:9027737..9027744,+#_3d8304846a709a9f884f6e356710b8b6p@chr1:9027737..9027744, +
2.55e-98FFCP PHASE1:Hg19::chr20:9147247..9147252,+#_0d5ffba5ac14eea913aabdbb83393e72p28@PLCB4
2.55e-98FFCP PHASE2:Hg19::chr20:23807149..23807173,-#_0d5ffba5ac14eea913aabdbb83393e72p2@CST2
2.55e-98FFCP PHASE2:Hg19::chr20:9147247..9147252,+#_0d5ffba5ac14eea913aabdbb83393e72p28@PLCB4
2.55e-98FFCP PHASE2:Hg19::chr20:23731569..23731573,-#_0d5ffba5ac14eea913aabdbb83393e72p5@CST1
2.55e-98FFCP PHASE1:Hg19::chr20:23669586..23669589,-#_0d5ffba5ac14eea913aabdbb83393e72p8@CST4
2.55e-98FFCP PHASE2:Hg19::chr10:108146890..108146892,-#_0d5ffba5ac14eea913aabdbb83393e72p@chr10:108146890..108146892, -
2.55e-98FFCP PHASE1:Hg19::chr4:71024322..71024329,+#_0d5ffba5ac14eea913aabdbb83393e72p10@C4orf40
2.55e-98FFCP PHASE2:Hg19::chr20:23669406..23669417,+#_0d5ffba5ac14eea913aabdbb83393e72p@chr20:23669406..23669417, +
2.55e-98FFCP PHASE1:Hg19::chr20:23669406..23669417,+#_0d5ffba5ac14eea913aabdbb83393e72p@chr20:23669406..23669417, +
2.55e-98FFCP PHASE1:Hg19::chr12:11085966..11085971,+#_0d5ffba5ac14eea913aabdbb83393e72p@chr12:11085966..11085971, +
2.55e-98FFCP PHASE1:Hg19::chr20:23756871..23756876,-#_0d5ffba5ac14eea913aabdbb83393e72p@chr20:23756871..23756876, -
2.55e-98FFCP PHASE2:Hg19::chr3:193096512..193096519,-#_0d5ffba5ac14eea913aabdbb83393e72p3@ATP13A5
2.55e-98FFCP PHASE1:Hg19::chr14:78009792..78009794,-#_0d5ffba5ac14eea913aabdbb83393e72p@chr14:78009792..78009794, -
2.55e-98FFCP PHASE1:Hg19::chr7:30914971..30914975,+#_0d5ffba5ac14eea913aabdbb83393e72p@chr7:30914971..30914975, +
2.55e-98FFCP PHASE1:Hg19::chr20:23669519..23669536,-#_0d5ffba5ac14eea913aabdbb83393e72p2@CST4
2.55e-98FFCP PHASE1:Hg19::chr3:124831516..124831517,+#_0d5ffba5ac14eea913aabdbb83393e72p@chr3:124831516..124831517, +
2.55e-98FFCP PHASE2:Hg19::chr7:30914971..30914975,+#_0d5ffba5ac14eea913aabdbb83393e72p@chr7:30914971..30914975, +
2.55e-98FFCP PHASE2:Hg19::chr20:23666508..23666519,-#_0d5ffba5ac14eea913aabdbb83393e72p@chr20:23666508..23666519, -
2.55e-98FFCP PHASE2:Hg19::chr20:23669586..23669589,-#_0d5ffba5ac14eea913aabdbb83393e72p8@CST4
2.55e-98FFCP PHASE1:Hg19::chr20:23666508..23666519,-#_0d5ffba5ac14eea913aabdbb83393e72p@chr20:23666508..23666519, -
2.55e-98FFCP PHASE2:Hg19::chr4:71024322..71024329,+#_0d5ffba5ac14eea913aabdbb83393e72p10@C4orf40
2.55e-98FFCP PHASE1:Hg19::chr12:11084887..11084890,-#_0d5ffba5ac14eea913aabdbb83393e72p@chr12:11084887..11084890, -
2.55e-98FFCP PHASE1:Hg19::chr20:23807079..23807088,+#_0d5ffba5ac14eea913aabdbb83393e72p@chr20:23807079..23807088, +
2.55e-98FFCP PHASE1:Hg19::chr17:46445915..46445921,+#_0d5ffba5ac14eea913aabdbb83393e72p@chr17:46445915..46445921, +
2.55e-98FFCP PHASE1:Hg19::chr6:80579456..80579464,+#_0d5ffba5ac14eea913aabdbb83393e72p@chr6:80579456..80579464, +
2.55e-98FFCP PHASE1:Hg19::chr20:23731305..23731308,+#_0d5ffba5ac14eea913aabdbb83393e72p@chr20:23731305..23731308, +
2.55e-98FFCP PHASE2:Hg19::chr17:46445915..46445921,+#_0d5ffba5ac14eea913aabdbb83393e72p@chr17:46445915..46445921, +
2.55e-98FFCP PHASE2:Hg19::chr20:23756871..23756876,-#_0d5ffba5ac14eea913aabdbb83393e72p@chr20:23756871..23756876, -
2.55e-98FFCP PHASE1:Hg19::chr20:23669590..23669615,-#_0d5ffba5ac14eea913aabdbb83393e72p1@CST4
2.55e-98FFCP PHASE2:Hg19::chr20:23669412..23669435,-#_0d5ffba5ac14eea913aabdbb83393e72p3@CST4
2.55e-98FFCP PHASE1:Hg19::chr20:23669412..23669435,-#_0d5ffba5ac14eea913aabdbb83393e72p3@CST4
2.55e-98FFCP PHASE2:Hg19::chr20:23669519..23669536,-#_0d5ffba5ac14eea913aabdbb83393e72p2@CST4
2.55e-98FFCP PHASE2:Hg19::chr10:82097369..82097377,+#_0d5ffba5ac14eea913aabdbb83393e72p@chr10:82097369..82097377, +
2.55e-98FFCP PHASE2:Hg19::chr3:124831516..124831517,+#_0d5ffba5ac14eea913aabdbb83393e72p@chr3:124831516..124831517, +
2.55e-98FFCP PHASE1:Hg19::chr1:9027764..9027769,+#_0d5ffba5ac14eea913aabdbb83393e72p@chr1:9027764..9027769, +
2.55e-98FFCP PHASE2:Hg19::chr20:23807079..23807088,+#_0d5ffba5ac14eea913aabdbb83393e72p@chr20:23807079..23807088, +
2.55e-98FFCP PHASE1:Hg19::chr20:23728459..23728468,-#_0d5ffba5ac14eea913aabdbb83393e72p@chr20:23728459..23728468, -
2.55e-98FFCP PHASE2:Hg19::chr1:9027764..9027769,+#_0d5ffba5ac14eea913aabdbb83393e72p@chr1:9027764..9027769, +
2.55e-98FFCP PHASE2:Hg19::chr6:80579456..80579464,+#_0d5ffba5ac14eea913aabdbb83393e72p@chr6:80579456..80579464, +
2.55e-98FFCP PHASE2:Hg19::chr20:23731305..23731308,+#_0d5ffba5ac14eea913aabdbb83393e72p@chr20:23731305..23731308, +
2.55e-98FFCP PHASE1:Hg19::chr20:23669548..23669561,-#_0d5ffba5ac14eea913aabdbb83393e72p4@CST4
2.55e-98FFCP PHASE1:Hg19::chr4:71020098..71020102,+#_0d5ffba5ac14eea913aabdbb83393e72p12@C4orf40
2.55e-98FFCP PHASE1:Hg19::chr10:108146890..108146892,-#_0d5ffba5ac14eea913aabdbb83393e72p@chr10:108146890..108146892, -
2.55e-98FFCP PHASE2:Hg19::chr20:23666520..23666533,-#_0d5ffba5ac14eea913aabdbb83393e72p@chr20:23666520..23666533, -
2.55e-98FFCP PHASE2:Hg19::chr20:23669590..23669615,-#_0d5ffba5ac14eea913aabdbb83393e72p1@CST4
2.55e-98FFCP PHASE1:Hg19::chr20:23666520..23666533,-#_0d5ffba5ac14eea913aabdbb83393e72p@chr20:23666520..23666533, -
2.55e-98FFCP PHASE1:Hg19::chr12:11084910..11084920,-#_0d5ffba5ac14eea913aabdbb83393e72p@chr12:11084910..11084920, -
2.55e-98FFCP PHASE2:Hg19::chr2:185364349..185364350,-#_0d5ffba5ac14eea913aabdbb83393e72p@chr2:185364349..185364350, -
2.55e-98FFCP PHASE1:Hg19::chr2:185364349..185364350,-#_0d5ffba5ac14eea913aabdbb83393e72p@chr2:185364349..185364350, -
2.55e-98FFCP PHASE1:Hg19::chr20:23731328..23731340,-#_0d5ffba5ac14eea913aabdbb83393e72p3@CST1
2.55e-98FFCP PHASE1:Hg19::chr14:21963349..21963357,-#_0d5ffba5ac14eea913aabdbb83393e72p@chr14:21963349..21963357, -
2.55e-98FFCP PHASE1:Hg19::chr20:23669996..23670023,-#_0d5ffba5ac14eea913aabdbb83393e72p5@CST4
2.55e-98FFCP PHASE2:Hg19::chr20:23669424..23669430,+#_0d5ffba5ac14eea913aabdbb83393e72p@chr20:23669424..23669430, +
2.55e-98FFCP PHASE2:Hg19::chr12:11085966..11085971,+#_0d5ffba5ac14eea913aabdbb83393e72p@chr12:11085966..11085971, +
2.55e-98FFCP PHASE1:Hg19::chr1:17248286..17248290,+#_0d5ffba5ac14eea913aabdbb83393e72p5@CROCC
2.55e-98FFCP PHASE2:Hg19::chr20:23728459..23728468,-#_0d5ffba5ac14eea913aabdbb83393e72p@chr20:23728459..23728468, -
2.55e-98FFCP PHASE1:Hg19::chr20:23669424..23669430,+#_0d5ffba5ac14eea913aabdbb83393e72p@chr20:23669424..23669430, +
2.55e-98FFCP PHASE2:Hg19::chr14:78009792..78009794,-#_0d5ffba5ac14eea913aabdbb83393e72p@chr14:78009792..78009794, -
2.55e-98FFCP PHASE2:Hg19::chr1:17248286..17248290,+#_0d5ffba5ac14eea913aabdbb83393e72p5@CROCC
2.55e-98FFCP PHASE2:Hg19::chr11:26587190..26587201,-#_0d5ffba5ac14eea913aabdbb83393e72p6@MUC15
2.55e-98FFCP PHASE2:Hg19::chr20:23669548..23669561,-#_0d5ffba5ac14eea913aabdbb83393e72p4@CST4
2.55e-98FFCP PHASE2:Hg19::chr4:71020098..71020102,+#_0d5ffba5ac14eea913aabdbb83393e72p12@C4orf40
2.55e-98FFCP PHASE1:Hg19::chr20:23804635..23804646,-#_0d5ffba5ac14eea913aabdbb83393e72p@chr20:23804635..23804646, -
2.55e-98FFCP PHASE2:Hg19::chr4:29339922..29339924,+#_0d5ffba5ac14eea913aabdbb83393e72p@chr4:29339922..29339924, +
2.55e-98FFCP PHASE1:Hg19::chr4:29339922..29339924,+#_0d5ffba5ac14eea913aabdbb83393e72p@chr4:29339922..29339924, +
2.55e-98FFCP PHASE1:Hg19::chr14:21516590..21516597,-#_0d5ffba5ac14eea913aabdbb83393e72p69@NDRG2
2.55e-98FFCP PHASE2:Hg19::chr20:23731328..23731340,-#_0d5ffba5ac14eea913aabdbb83393e72p3@CST1
2.55e-98FFCP PHASE1:Hg19::chrX:133153541..133153543,+#_0d5ffba5ac14eea913aabdbb83393e72p@chrX:133153541..133153543, +
2.55e-98FFCP PHASE1:Hg19::chr20:23669565..23669574,-#_0d5ffba5ac14eea913aabdbb83393e72p6@CST4
2.55e-98FFCP PHASE1:Hg19::chr4:71020114..71020117,+#_0d5ffba5ac14eea913aabdbb83393e72p11@C4orf40
2.55e-98FFCP PHASE2:Hg19::chr20:23666541..23666542,-#_0d5ffba5ac14eea913aabdbb83393e72p@chr20:23666541..23666542, -
2.55e-98FFCP PHASE2:Hg19::chr12:11084887..11084890,-#_0d5ffba5ac14eea913aabdbb83393e72p@chr12:11084887..11084890, -
2.55e-98FFCP PHASE2:Hg19::chrX:18680142..18680146,-#_0d5ffba5ac14eea913aabdbb83393e72p@chrX:18680142..18680146, -
2.55e-98FFCP PHASE2:Hg19::chr20:23669996..23670023,-#_0d5ffba5ac14eea913aabdbb83393e72p5@CST4
2.55e-98FFCP PHASE1:Hg19::chr20:23666541..23666542,-#_0d5ffba5ac14eea913aabdbb83393e72p@chr20:23666541..23666542, -
2.55e-98FFCP PHASE1:Hg19::chrX:18680142..18680146,-#_0d5ffba5ac14eea913aabdbb83393e72p@chrX:18680142..18680146, -
2.55e-98FFCP PHASE1:Hg19::chr2:9956075..9956086,-#_0d5ffba5ac14eea913aabdbb83393e72p@chr2:9956075..9956086, -
2.55e-98FFCP PHASE1:Hg19::chr20:23807100..23807121,-#_0d5ffba5ac14eea913aabdbb83393e72p3@CST2
2.55e-98FFCP PHASE1:Hg19::chr10:82097369..82097377,+#_0d5ffba5ac14eea913aabdbb83393e72p@chr10:82097369..82097377, +
2.55e-98FFCP PHASE2:Hg19::chr11:13083749..13083751,+#_0d5ffba5ac14eea913aabdbb83393e72p@chr11:13083749..13083751, +
2.55e-98FFCP PHASE1:Hg19::chr8:5086915..5086916,+#_0d5ffba5ac14eea913aabdbb83393e72p@chr8:5086915..5086916, +
2.55e-98FFCP PHASE2:Hg19::chr14:21963349..21963357,-#_0d5ffba5ac14eea913aabdbb83393e72p@chr14:21963349..21963357, -
2.55e-98FFCP PHASE1:Hg19::chr11:26587190..26587201,-#_0d5ffba5ac14eea913aabdbb83393e72p6@MUC15
2.55e-98FFCP PHASE2:Hg19::chr20:23804635..23804646,-#_0d5ffba5ac14eea913aabdbb83393e72p@chr20:23804635..23804646, -
2.55e-98FFCP PHASE1:Hg19::chr20:23670122..23670133,-#_0d5ffba5ac14eea913aabdbb83393e72p9@CST4
2.55e-98FFCP PHASE2:Hg19::chr20:23669439..23669451,-#_0d5ffba5ac14eea913aabdbb83393e72p7@CST4
2.55e-98FFCP PHASE1:Hg19::chr20:23669439..23669451,-#_0d5ffba5ac14eea913aabdbb83393e72p7@CST4
2.55e-98FFCP PHASE2:Hg19::chr4:154534400..154534402,-#_0d5ffba5ac14eea913aabdbb83393e72p@chr4:154534400..154534402, -
2.55e-98FFCP PHASE1:Hg19::chr4:154534400..154534402,-#_0d5ffba5ac14eea913aabdbb83393e72p@chr4:154534400..154534402, -
2.55e-98FFCP PHASE2:Hg19::chrX:133153541..133153543,+#_0d5ffba5ac14eea913aabdbb83393e72p@chrX:133153541..133153543, +

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=UBERON:0001736&oldid=3277274"