FF:11313-117C8: Difference between revisions
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{{f5samples | {{f5samples | ||
|ancestors_in_anatomy_facet= | |DRA_sample_Accession=CAGE@SAMD00005017 | ||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003 | |DRA_sample_Accession_RNASeq=sRNA-Seq@SAMD00005017 | ||
|accession_numbers=CAGE;DRX008323;DRR009195;DRZ000620;DRZ002005;DRZ011970;DRZ013355 | |||
|accession_numbers_RNASeq=sRNA-Seq;DRX037193;DRR041559;DRZ007201 | |||
|ancestors_in_anatomy_facet= | |||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000988,CL:0000548,CL:0000763,CL:0002371,CL:0000766,CL:0000219,CL:0000325,CL:0000473,CL:0000234,CL:0000738,CL:0000255,CL:0000235 | |||
|ancestors_in_disease_facet= | |ancestors_in_disease_facet= | ||
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000086 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score=chr2:68592406..68592424,+!p1@PLEK!3.12!1326.10!PLEK;;chr11:47400078..47400106,-!p1@SPI1!2.56!365.51!SPI1;;chr12:54778471..54778528,-!p1@ZNF385A!2.37!233.77!ZNF385A;;chr11:47279504..47279563,+!p1@NR1H3!2.34!473.86!NR1H3;;chr10:64576105..64576133,-!p1@EGR2!2.13!264.89!EGR2;;chr11:47400062..47400077,-!p2@SPI1!2.11!127.06!SPI1;;chr7:115670804..115670825,-!p1@TFEC!2.09!121.68!TFEC;;chr5:71803177..71803255,-!p1@ZNF366!1.77!58.27!ZNF366;;chr10:31288398..31288455,-!p2@ZNF438!1.74!61.78!ZNF438;;chr3:12330560..12330579,+!p1@PPARG!1.74!61.08!PPARG;;chr16:85932760..85932775,+!p1@IRF8!1.66!44.23!IRF8;;chr8:72756063..72756125,-!p1@MSC!1.64!84.48!MSC;;chr7:137620684..137620711,-!p4@CREB3L2!1.43!25.97!CREB3L2;;chr11:47399996..47400014,-!p4@SPI1!1.43!25.74!SPI1;;chr10:64018918..64018936,+!p2@ZNF365!1.42!25.04!ZNF365;;chr11:47400045..47400060,-!p6@SPI1!1.42!25.04!SPI1;;chr11:47400032..47400043,-!p5@SPI1!1.41!24.80!SPI1;;chr12:26277956..26277980,-!p1@BHLHE41!1.37!79.33!BHLHE41;;chr3:69788576..69788648,+!p1@MITF!1.36!114.19!MITF;;chr11:47399947..47399961,-!p3@SPI1!1.35!21.53!SPI1;;chr10:51572408..51572454,+!p3@NCOA4!1.34!119.11!NCOA4;;chr7:137620650..137620677,-!p3@CREB3L2!1.34!20.83!CREB3L2;;chr12:26277817..26277863,-!p2@BHLHE41!1.33!27.14!BHLHE41;;chr19:33793430..33793447,-!p1@CEBPA!1.32!82.60!CEBPA;;chr10:31288370..31288393,-!p3@ZNF438!1.32!20.12!ZNF438;;chr7:128577972..128578047,+!p1@IRF5!1.26!26.91!IRF5;;chr2:68592394..68592405,+!p2@PLEK!1.26!17.32!PLEK;;chr7:50343634..50343717,+!p2@IKZF1!1.22!15.44!IKZF1;;chr1:158985493..158985535,+!p4@IFI16!1.21!22.93!IFI16;;chr7:50344289..50344323,+!p1@IKZF1!1.21!15.21!IKZF1;;chr12:26277929..26277955,-!p3@BHLHE41!1.15!18.72!BHLHE41;;chr12:12764995..12765017,+!p3@CREBL2!1.14!18.02!CREBL2;;chr1:212782094..212782109,+!p1@ATF3!1.10!316.14!ATF3;;chr2:145277640..145277771,-!p1@ZEB2!1.08!147.89!ZEB2;;chr20:39317868..39317884,-!p1@MAFB!1.05!122.85!MAFB;;chr2:145277882..145277967,-!p3@ZEB2!1.05!17.78!ZEB2;;chr6:44233252..44233296,-!p1@NFKBIE!1.03!96.41!NFKBIE;;chr8:102216925..102216938,-!p7@ZNF706!1.03!9.83!ZNF706;;chr16:88752861..88752884,-!p2@SNAI3!1.03!9.83!SNAI3;;chr8:102216978..102217003,-!p4@ZNF706!1.01!9.13!ZNF706;;chr8:72756667..72756736,-!p2@MSC!0.98!13.57!MSC;;chr1:212738742..212738755,+!p2@ATF3!0.97!8.42!ATF3;;chr11:47279491..47279502,+!p6@NR1H3!0.97!8.42!NR1H3;;chr11:47279568..47279577,+!p8@NR1H3!0.97!8.42!NR1H3;;chr14:75988771..75988826,+!p1@BATF!0.93!10.06!BATF;;chr8:72756267..72756296,-!p4@MSC!0.92!11.00!MSC;;chr6:41691289..41691312,-!p9@TFEB!0.92!7.25!TFEB;;chr2:185463247..185463263,+!p1@ZNF804A!0.91!13.10!ZNF804A;;chr20:48807456..48807475,+!p3@CEBPB!0.90!13.81!CEBPB;;chr6:152011654..152011682,+!p1@ESR1!0.90!7.02!ESR1;;chr12:54778351..54778378,-!p6@ZNF385A!0.90!7.02!ZNF385A;;chr12:12764947..12764986,+!p2@CREBL2!0.89!13.81!CREBL2;;chr6:35310395..35310410,+!p2@PPARD!0.87!26.21!PPARD;;chr6:15246200..15246214,+!p2@JARID2!0.87!18.72!JARID2;;chr3:12392932..12392962,+!p8@PPARG!0.86!6.32!PPARG;;chr8:72756637..72756664,-!p3@MSC!0.85!7.02!MSC;;chr6:41673552..41673571,-!p10@TFEB!0.85!6.08!TFEB;;chr8:53373491..53373506,-!p4@ST18!0.85!6.08!ST18;;chr8:72755987..72756002,-!p7@MSC!0.85!6.08!MSC;;chr22:38609570..38609585,+!p6@MAFF!0.85!6.08!MAFF;;chr2:231090433..231090469,+!p1@SP140!0.85!6.08!SP140;;chr2:145275162..145275202,-!p2@ZEB2!0.84!37.21!ZEB2;;chr16:31885093..31885165,+!p1@ZNF267!0.83!94.07!ZNF267;;chr16:88752889..88752921,-!p1@SNAI3!0.82!6.55!SNAI3;;chr22:38597987..38598021,+!p2@MAFF!0.81!35.80!MAFF;;chr5:142782823..142782854,-!p3@NR3C1!0.81!7.96!NR3C1;;chr18:6414884..6414942,-!p1@L3MBTL4!0.81!7.02!L3MBTL4;;chr13:41593425..41593480,-!p1@ELF1!0.79!35.33!ELF1;;chr8:72756213..72756243,-!p5@MSC!0.79!6.79!MSC;;chr1:41157641..41157665,+!p7@NFYC!0.79!6.79!NFYC;;chr20:48807351..48807384,+!p1@CEBPB!0.77!551.31!CEBPB;;chr7:115670792..115670797,-!p2@TFEC!0.77!4.91!TFEC;;chr16:31141328..31141350,+!p2@KAT8!0.77!4.91!KAT8;;chr3:12392909..12392921,+!p11@PPARG!0.77!4.91!PPARG;;chr3:129158715..129158766,-!p2@MBD4!0.75!49.37!MBD4;;chr2:178129358..178129403,-!p5@NFE2L2!0.75!20.36!NFE2L2;;chr6:35310363..35310382,+!p3@PPARD!0.75!18.72!PPARD;;chr15:100106670..100106697,+!p4@MEF2A!0.75!7.96!MEF2A;;chr19:13213954..13214021,-!p4@LYL1!0.75!4.68!LYL1;;chr22:38609587..38609607,+!p7@MAFF!0.75!4.68!MAFF;;chr2:185463158..185463181,+!p2@ZNF804A!0.75!4.68!ZNF804A;;chr1:78050720..78050734,-!p9@ZZZ3!0.75!4.68!ZZZ3;;chr8:72756380..72756427,-!p8@MSC!0.75!4.68!MSC;;chr2:61108695..61108753,+!p1@REL!0.74!34.63!REL;;chr1:38325227..38325246,-!p2@MTF1!0.74!6.32!MTF1;;chr7:50344251..50344288,+!p3@IKZF1!0.74!4.45!IKZF1;;chr22:38609611..38609624,+!p5@MAFF!0.74!4.45!MAFF;;chr1:161736140..161736151,+!p3@ATF6!0.73!15.21!ATF6;;chr19:36391434..36391450,-!p1@NFKBID!0.73!9.13!NFKBID;;chr8:72756023..72756055,-!p6@MSC!0.72!5.38!MSC;;chr7:139762438..139762447,-!p4@PARP12!0.72!4.21!PARP12;;chr3:187455680..187455700,-!p4@BCL6!0.72!4.21!BCL6;;chr10:31288329..31288353,-!p7@ZNF438!0.72!4.21!ZNF438;;chr19:10416315..10416333,-!p1@ZGLP1!0.72!4.21!ZGLP1;;chr16:67063211..67063240,+!p2@CBFB!0.71!22.00!CBFB;;chr1:38325256..38325280,-!p1@MTF1!0.70!27.85!MTF1;;chr13:27998831..27998851,+!p2@GTF3A!0.70!26.91!GTF3A;;chr16:68119324..68119364,+!p1@NFATC3!0.70!20.12!NFATC3;;chr10:51572339..51572376,+!p4@NCOA4!0.70!9.83!NCOA4;;chr7:139762641..139762768,-!p1@PARP12!0.69!61.31!PARP12;;chr6:7108855..7108903,+!p5@RREB1!0.69!9.59!RREB1;;chr2:70142232..70142251,+!p1@MXD1!0.68!24.57!MXD1;;chr12:11802932..11802949,+!p3@ETV6!0.68!7.02!ETV6;;chr3:69811858..69811881,+!p5@MITF!0.68!3.74!MITF;;chr6:144385698..144385742,-!p2@PLAGL1!0.67!4.68!PLAGL1;;chr19:35759824..35759891,+!p1@USF2!0.66!130.11!USF2;;chr2:238600789..238600925,+!p1@LRRFIP1!0.66!84.01!LRRFIP1;;chr6:34204973..34204990,+!p4@HMGA1!0.66!55.46!HMGA1;;chr13:41635029..41635044,-!p4@ELF1!0.66!8.42!ELF1;;chr6:15246217..15246228,+!p3@JARID2!0.66!6.79!JARID2;;chr12:26278008..26278024,-!p4@BHLHE41!0.65!4.21!BHLHE41;;chr4:57522513..57522548,-!p4@HOPX!0.65!3.51!HOPX;;chr20:20348740..20348757,+!p1@INSM1!0.65!3.51!INSM1;;chr19:13213704..13213726,-!p3@LYL1!0.64!4.68!LYL1;;chr3:187463179..187463201,-!p2@BCL6!0.63!15.68!BCL6;;chr1:158985469..158985489,+!p7@IFI16!0.63!3.98!IFI16;;chr2:231090344..231090361,-!p3@SP110!0.63!3.28!SP110;;chr8:53373515..53373526,-!p8@ST18!0.63!3.28!ST18;;chr13:27998854..27998866,+!p3@GTF3A!0.62!7.02!GTF3A;;chr2:145275211..145275220,-!p14@ZEB2!0.62!3.98!ZEB2;;chr3:48282587..48282603,+!p1@ZNF589!0.61!16.15!ZNF589;;chr10:35484804..35484902,+!p2@CREM!0.61!13.81!CREM;;chr19:13213662..13213686,-!p1@LYL1!0.61!4.91!LYL1;;chr1:41157671..41157695,+!p6@NFYC!0.61!4.68!NFYC;;chr3:5021026..5021035,+!p5@BHLHE40!0.61!3.98!BHLHE40;;chr17:45810594..45810608,+!p1@TBX21!0.61!3.04!TBX21;;chr6:106535656..106535682,+!p10@PRDM1!0.61!3.04!PRDM1;;chr12:26277994..26278001,-!p6@BHLHE41!0.61!3.04!BHLHE41;;chr17:40440481..40440550,+!p1@STAT5A!0.60!25.74!STAT5A;;chr2:61108650..61108687,+!p2@REL!0.60!17.32!REL;;chr2:145275228..145275241,-!p11@ZEB2!0.60!3.74!ZEB2;;chr21:36421535..36421610,-!p2@RUNX1!0.59!12.17!RUNX1;;chr19:19516543..19516559,+!p6@GATAD2A!0.59!11.00!GATAD2A;;chr2:97202480..97202499,+!p1@ARID5A!0.58!34.87!ARID5A;;chr6:44233244..44233248,-!p3@NFKBIE!0.58!2.81!NFKBIE;;chr8:72756194..72756208,-!p9@MSC!0.58!2.81!MSC;;chr8:72756251..72756262,-!p12@MSC!0.58!2.81!MSC;;chr9:137217986..137218049,+!p3@RXRA!0.57!9.13!RXRA;;chr1:221052700..221052730,+!p5@HLX!0.57!4.45!HLX;;chr12:11802753..11802834,+!p2@ETV6!0.56!15.68!ETV6;;chr12:53774567..53774658,+!p2@SP1!0.56!15.68!SP1;;chr16:79634624..79634642,-!p1@MAF!0.56!12.64!MAF;;chr7:6676986..6677005,+!p2@ENST00000427912!0.56!8.42!ZNF316;;chr2:208031943..208031978,-!p5@KLF7!0.56!3.74!KLF7;;chr17:40440225..40440268,+!p3@STAT5A!0.56!3.51!STAT5A;;chr11:128563948..128564003,+!p1@FLI1!0.55!38.61!FLI1;;chr1:120190786..120190915,-!p1@ZNF697!0.55!22.70!ZNF697;;chr9:102584159..102584174,+!p2@NR4A3!0.55!5.15!NR4A3;;chr5:142814347..142814358,-!p27@NR3C1!0.55!2.57!NR3C1;;chr5:142814364..142814381,-!p22@NR3C1!0.55!2.57!NR3C1;;chr11:47399920..47399931,-!p7@SPI1!0.55!2.57!SPI1;;chr12:54778444..54778451,-!p8@ZNF385A!0.55!2.57!ZNF385A;;chr3:12392991..12393030,+!p7@PPARG!0.55!2.57!PPARG;;chr1:41157421..41157482,+!p2@NFYC!0.54!35.57!NFYC;;chr20:62462566..62462631,-!p1@ZBTB46!0.54!5.38!ZBTB46;;chr20:48807648..48807671,+!p9@CEBPB!0.54!3.98!CEBPB;;chr10:104155659..104155676,+!p4@NFKB2!0.54!3.28!NFKB2;;chr14:64971438..64971450,+!p2@ZBTB1!0.53!6.55!ZBTB1;;chr7:99156393..99156433,+!p6@ZNF655!0.53!6.32!ZNF655;;chr2:61108771..61108789,+!p4@REL!0.53!3.98!REL;;chr19:50432132..50432217,+!p2@ATF5!0.53!3.04!ATF5;;chr14:68283291..68283323,-!p1@ZFYVE26!0.52!49.37!ZFYVE26;;chr4:106068026..106068084,+!p1@TET2!0.52!26.68!TET2;;chr10:104154246..104154347,+!p3@NFKB2!0.52!18.02!NFKB2;;chr9:102584262..102584276,+!p1@NR4A3!0.52!6.08!NR4A3;;chr9:102584128..102584144,+!p3@NR4A3!0.52!5.15!NR4A3;;chr1:158985457..158985468,+!p12@IFI16!0.52!2.34!IFI16;;chr9:73028433..73028444,-!p15@KLF9!0.52!2.34!KLF9;;chr9:128509878..128509902,+!p5@PBX3!0.52!2.34!PBX3;;chr11:65554528..65554546,+!p1@OVOL1!0.52!2.34!OVOL1;;chr12:26277798..26277809,-!p5@BHLHE41!0.52!2.34!BHLHE41;;chrX:129244454..129244488,-!p1@ELF4!0.51!21.06!ELF4;;chr6:41703296..41703367,-!p1@TFEB!0.51!14.51!TFEB;;chr6:7108179..7108199,+!p4@RREB1!0.51!5.38!RREB1;;chr4:144435112..144435176,+!p3@SMARCA5!0.51!5.38!SMARCA5;;chr1:8484007..8484061,-!p13@RERE!0.51!3.04!RERE;;chr13:45010939..45011033,-!p1@TSC22D1!0.50!189.08!TSC22D1;;chr2:178129414..178129517,-!p1@NFE2L2!0.50!113.73!NFE2L2;;chr14:21566731..21566836,-!p1@ZNF219!0.50!30.65!ZNF219;;chr11:13299319..13299424,+!p1@ARNTL!0.50!28.31!ARNTL;;chr19:926001..926046,+!p1@ARID3A!0.50!9.36!ARID3A;;chr9:73028387..73028418,-!p4@KLF9!0.50!5.15!KLF9;;chr19:12902289..12902307,+!p1@JUNB!0.49!646.09!JUNB;;chr2:8822176..8822196,+!p1@ID2!0.49!399.91!ID2;;chrX:131623044..131623089,-!p1@MBNL3!0.49!11.00!MBNL3;;chr2:85197924..85197955,+!p3@KCMF1!0.49!9.83!KCMF1;;chr3:48282536..48282586,+!p2@ZNF589!0.49!7.02!ZNF589;;chr20:4880761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| |expression_enrichment_score=chr2:68592406..68592424,+!p1@PLEK!3.12!1326.10!PLEK;;chr11:47400078..47400106,-!p1@SPI1!2.56!365.51!SPI1;;chr12:54778471..54778528,-!p1@ZNF385A!2.37!233.77!ZNF385A;;chr11:47279504..47279563,+!p1@NR1H3!2.34!473.86!NR1H3;;chr10:64576105..64576133,-!p1@EGR2!2.13!264.89!EGR2;;chr11:47400062..47400077,-!p2@SPI1!2.11!127.06!SPI1;;chr7:115670804..115670825,-!p1@TFEC!2.09!121.68!TFEC;;chr5:71803177..71803255,-!p1@ZNF366!1.77!58.27!ZNF366;;chr10:31288398..31288455,-!p2@ZNF438!1.74!61.78!ZNF438;;chr3:12330560..12330579,+!p1@PPARG!1.74!61.08!PPARG;;chr16:85932760..85932775,+!p1@IRF8!1.66!44.23!IRF8;;chr8:72756063..72756125,-!p1@MSC!1.64!84.48!MSC;;chr7:137620684..137620711,-!p4@CREB3L2!1.43!25.97!CREB3L2;;chr11:47399996..47400014,-!p4@SPI1!1.43!25.74!SPI1;;chr10:64018918..64018936,+!p2@ZNF365!1.42!25.04!ZNF365;;chr11:47400045..47400060,-!p6@SPI1!1.42!25.04!SPI1;;chr11:47400032..47400043,-!p5@SPI1!1.41!24.80!SPI1;;chr12:26277956..26277980,-!p1@BHLHE41!1.37!79.33!BHLHE41;;chr3:69788576..69788648,+!p1@MITF!1.36!114.19!MITF;;chr11:47399947..47399961,-!p3@SPI1!1.35!21.53!SPI1;;chr10:51572408..51572454,+!p3@NCOA4!1.34!119.11!NCOA4;;chr7:137620650..137620677,-!p3@CREB3L2!1.34!20.83!CREB3L2;;chr12:26277817..26277863,-!p2@BHLHE41!1.33!27.14!BHLHE41;;chr19:33793430..33793447,-!p1@CEBPA!1.32!82.60!CEBPA;;chr10:31288370..31288393,-!p3@ZNF438!1.32!20.12!ZNF438;;chr7:128577972..128578047,+!p1@IRF5!1.26!26.91!IRF5;;chr2:68592394..68592405,+!p2@PLEK!1.26!17.32!PLEK;;chr7:50343634..50343717,+!p2@IKZF1!1.22!15.44!IKZF1;;chr1:158985493..158985535,+!p4@IFI16!1.21!22.93!IFI16;;chr7:50344289..50344323,+!p1@IKZF1!1.21!15.21!IKZF1;;chr12:26277929..26277955,-!p3@BHLHE41!1.15!18.72!BHLHE41;;chr12:12764995..12765017,+!p3@CREBL2!1.14!18.02!CREBL2;;chr1:212782094..212782109,+!p1@ATF3!1.10!316.14!ATF3;;chr2:145277640..145277771,-!p1@ZEB2!1.08!147.89!ZEB2;;chr20:39317868..39317884,-!p1@MAFB!1.05!122.85!MAFB;;chr2:145277882..145277967,-!p3@ZEB2!1.05!17.78!ZEB2;;chr6:44233252..44233296,-!p1@NFKBIE!1.03!96.41!NFKBIE;;chr8:102216925..102216938,-!p7@ZNF706!1.03!9.83!ZNF706;;chr16:88752861..88752884,-!p2@SNAI3!1.03!9.83!SNAI3;;chr8:102216978..102217003,-!p4@ZNF706!1.01!9.13!ZNF706;;chr8:72756667..72756736,-!p2@MSC!0.98!13.57!MSC;;chr1:212738742..212738755,+!p2@ATF3!0.97!8.42!ATF3;;chr11:47279491..47279502,+!p6@NR1H3!0.97!8.42!NR1H3;;chr11:47279568..47279577,+!p8@NR1H3!0.97!8.42!NR1H3;;chr14:75988771..75988826,+!p1@BATF!0.93!10.06!BATF;;chr8:72756267..72756296,-!p4@MSC!0.92!11.00!MSC;;chr6:41691289..41691312,-!p9@TFEB!0.92!7.25!TFEB;;chr2:185463247..185463263,+!p1@ZNF804A!0.91!13.10!ZNF804A;;chr20:48807456..48807475,+!p3@CEBPB!0.90!13.81!CEBPB;;chr6:152011654..152011682,+!p1@ESR1!0.90!7.02!ESR1;;chr12:54778351..54778378,-!p6@ZNF385A!0.90!7.02!ZNF385A;;chr12:12764947..12764986,+!p2@CREBL2!0.89!13.81!CREBL2;;chr6:35310395..35310410,+!p2@PPARD!0.87!26.21!PPARD;;chr6:15246200..15246214,+!p2@JARID2!0.87!18.72!JARID2;;chr3:12392932..12392962,+!p8@PPARG!0.86!6.32!PPARG;;chr8:72756637..72756664,-!p3@MSC!0.85!7.02!MSC;;chr6:41673552..41673571,-!p10@TFEB!0.85!6.08!TFEB;;chr8:53373491..53373506,-!p4@ST18!0.85!6.08!ST18;;chr8:72755987..72756002,-!p7@MSC!0.85!6.08!MSC;;chr22:38609570..38609585,+!p6@MAFF!0.85!6.08!MAFF;;chr2:231090433..231090469,+!p1@SP140!0.85!6.08!SP140;;chr2:145275162..145275202,-!p2@ZEB2!0.84!37.21!ZEB2;;chr16:31885093..31885165,+!p1@ZNF267!0.83!94.07!ZNF267;;chr16:88752889..88752921,-!p1@SNAI3!0.82!6.55!SNAI3;;chr22:38597987..38598021,+!p2@MAFF!0.81!35.80!MAFF;;chr5:142782823..142782854,-!p3@NR3C1!0.81!7.96!NR3C1;;chr18:6414884..6414942,-!p1@L3MBTL4!0.81!7.02!L3MBTL4;;chr13:41593425..41593480,-!p1@ELF1!0.79!35.33!ELF1;;chr8:72756213..72756243,-!p5@MSC!0.79!6.79!MSC;;chr1:41157641..41157665,+!p7@NFYC!0.79!6.79!NFYC;;chr20:48807351..48807384,+!p1@CEBPB!0.77!551.31!CEBPB;;chr7:115670792..115670797,-!p2@TFEC!0.77!4.91!TFEC;;chr16:31141328..31141350,+!p2@KAT8!0.77!4.91!KAT8;;chr3:12392909..12392921,+!p11@PPARG!0.77!4.91!PPARG;;chr3:129158715..129158766,-!p2@MBD4!0.75!49.37!MBD4;;chr2:178129358..178129403,-!p5@NFE2L2!0.75!20.36!NFE2L2;;chr6:35310363..35310382,+!p3@PPARD!0.75!18.72!PPARD;;chr15:100106670..100106697,+!p4@MEF2A!0.75!7.96!MEF2A;;chr19:13213954..13214021,-!p4@LYL1!0.75!4.68!LYL1;;chr22:38609587..38609607,+!p7@MAFF!0.75!4.68!MAFF;;chr2:185463158..185463181,+!p2@ZNF804A!0.75!4.68!ZNF804A;;chr1:78050720..78050734,-!p9@ZZZ3!0.75!4.68!ZZZ3;;chr8:72756380..72756427,-!p8@MSC!0.75!4.68!MSC;;chr2:61108695..61108753,+!p1@REL!0.74!34.63!REL;;chr1:38325227..38325246,-!p2@MTF1!0.74!6.32!MTF1;;chr7:50344251..50344288,+!p3@IKZF1!0.74!4.45!IKZF1;;chr22:38609611..38609624,+!p5@MAFF!0.74!4.45!MAFF;;chr1:161736140..161736151,+!p3@ATF6!0.73!15.21!ATF6;;chr19:36391434..36391450,-!p1@NFKBID!0.73!9.13!NFKBID;;chr8:72756023..72756055,-!p6@MSC!0.72!5.38!MSC;;chr7:139762438..139762447,-!p4@PARP12!0.72!4.21!PARP12;;chr3:187455680..187455700,-!p4@BCL6!0.72!4.21!BCL6;;chr10:31288329..31288353,-!p7@ZNF438!0.72!4.21!ZNF438;;chr19:10416315..10416333,-!p1@ZGLP1!0.72!4.21!ZGLP1;;chr16:67063211..67063240,+!p2@CBFB!0.71!22.00!CBFB;;chr1:38325256..38325280,-!p1@MTF1!0.70!27.85!MTF1;;chr13:27998831..27998851,+!p2@GTF3A!0.70!26.91!GTF3A;;chr16:68119324..68119364,+!p1@NFATC3!0.70!20.12!NFATC3;;chr10:51572339..51572376,+!p4@NCOA4!0.70!9.83!NCOA4;;chr7:139762641..139762768,-!p1@PARP12!0.69!61.31!PARP12;;chr6:7108855..7108903,+!p5@RREB1!0.69!9.59!RREB1;;chr2:70142232..70142251,+!p1@MXD1!0.68!24.57!MXD1;;chr12:11802932..11802949,+!p3@ETV6!0.68!7.02!ETV6;;chr3:69811858..69811881,+!p5@MITF!0.68!3.74!MITF;;chr6:144385698..144385742,-!p2@PLAGL1!0.67!4.68!PLAGL1;;chr19:35759824..35759891,+!p1@USF2!0.66!130.11!USF2;;chr2:238600789..238600925,+!p1@LRRFIP1!0.66!84.01!LRRFIP1;;chr6:34204973..34204990,+!p4@HMGA1!0.66!55.46!HMGA1;;chr13:41635029..41635044,-!p4@ELF1!0.66!8.42!ELF1;;chr6:15246217..15246228,+!p3@JARID2!0.66!6.79!JARID2;;chr12:26278008..26278024,-!p4@BHLHE41!0.65!4.21!BHLHE41;;chr4:57522513..57522548,-!p4@HOPX!0.65!3.51!HOPX;;chr20:20348740..20348757,+!p1@INSM1!0.65!3.51!INSM1;;chr19:13213704..13213726,-!p3@LYL1!0.64!4.68!LYL1;;chr3:187463179..187463201,-!p2@BCL6!0.63!15.68!BCL6;;chr1:158985469..158985489,+!p7@IFI16!0.63!3.98!IFI16;;chr2:231090344..231090361,-!p3@SP110!0.63!3.28!SP110;;chr8:53373515..53373526,-!p8@ST18!0.63!3.28!ST18;;chr13:27998854..27998866,+!p3@GTF3A!0.62!7.02!GTF3A;;chr2:145275211..145275220,-!p14@ZEB2!0.62!3.98!ZEB2;;chr3:48282587..48282603,+!p1@ZNF589!0.61!16.15!ZNF589;;chr10:35484804..35484902,+!p2@CREM!0.61!13.81!CREM;;chr19:13213662..13213686,-!p1@LYL1!0.61!4.91!LYL1;;chr1:41157671..41157695,+!p6@NFYC!0.61!4.68!NFYC;;chr3:5021026..5021035,+!p5@BHLHE40!0.61!3.98!BHLHE40;;chr17:45810594..45810608,+!p1@TBX21!0.61!3.04!TBX21;;chr6:106535656..106535682,+!p10@PRDM1!0.61!3.04!PRDM1;;chr12:26277994..26278001,-!p6@BHLHE41!0.61!3.04!BHLHE41;;chr17:40440481..40440550,+!p1@STAT5A!0.60!25.74!STAT5A;;chr2:61108650..61108687,+!p2@REL!0.60!17.32!REL;;chr2:145275228..145275241,-!p11@ZEB2!0.60!3.74!ZEB2;;chr21:36421535..36421610,-!p2@RUNX1!0.59!12.17!RUNX1;;chr19:19516543..19516559,+!p6@GATAD2A!0.59!11.00!GATAD2A;;chr2:97202480..97202499,+!p1@ARID5A!0.58!34.87!ARID5A;;chr6:44233244..44233248,-!p3@NFKBIE!0.58!2.81!NFKBIE;;chr8:72756194..72756208,-!p9@MSC!0.58!2.81!MSC;;chr8:72756251..72756262,-!p12@MSC!0.58!2.81!MSC;;chr9:137217986..137218049,+!p3@RXRA!0.57!9.13!RXRA;;chr1:221052700..221052730,+!p5@HLX!0.57!4.45!HLX;;chr12:11802753..11802834,+!p2@ETV6!0.56!15.68!ETV6;;chr12:53774567..53774658,+!p2@SP1!0.56!15.68!SP1;;chr16:79634624..79634642,-!p1@MAF!0.56!12.64!MAF;;chr7:6676986..6677005,+!p2@ENST00000427912!0.56!8.42!ZNF316;;chr2:208031943..208031978,-!p5@KLF7!0.56!3.74!KLF7;;chr17:40440225..40440268,+!p3@STAT5A!0.56!3.51!STAT5A;;chr11:128563948..128564003,+!p1@FLI1!0.55!38.61!FLI1;;chr1:120190786..120190915,-!p1@ZNF697!0.55!22.70!ZNF697;;chr9:102584159..102584174,+!p2@NR4A3!0.55!5.15!NR4A3;;chr5:142814347..142814358,-!p27@NR3C1!0.55!2.57!NR3C1;;chr5:142814364..142814381,-!p22@NR3C1!0.55!2.57!NR3C1;;chr11:47399920..47399931,-!p7@SPI1!0.55!2.57!SPI1;;chr12:54778444..54778451,-!p8@ZNF385A!0.55!2.57!ZNF385A;;chr3:12392991..12393030,+!p7@PPARG!0.55!2.57!PPARG;;chr1:41157421..41157482,+!p2@NFYC!0.54!35.57!NFYC;;chr20:62462566..62462631,-!p1@ZBTB46!0.54!5.38!ZBTB46;;chr20:48807648..48807671,+!p9@CEBPB!0.54!3.98!CEBPB;;chr10:104155659..104155676,+!p4@NFKB2!0.54!3.28!NFKB2;;chr14:64971438..64971450,+!p2@ZBTB1!0.53!6.55!ZBTB1;;chr7:99156393..99156433,+!p6@ZNF655!0.53!6.32!ZNF655;;chr2:61108771..61108789,+!p4@REL!0.53!3.98!REL;;chr19:50432132..50432217,+!p2@ATF5!0.53!3.04!ATF5;;chr14:68283291..68283323,-!p1@ZFYVE26!0.52!49.37!ZFYVE26;;chr4:106068026..106068084,+!p1@TET2!0.52!26.68!TET2;;chr10:104154246..104154347,+!p3@NFKB2!0.52!18.02!NFKB2;;chr9:102584262..102584276,+!p1@NR4A3!0.52!6.08!NR4A3;;chr9:102584128..102584144,+!p3@NR4A3!0.52!5.15!NR4A3;;chr1:158985457..158985468,+!p12@IFI16!0.52!2.34!IFI16;;chr9:73028433..73028444,-!p15@KLF9!0.52!2.34!KLF9;;chr9:128509878..128509902,+!p5@PBX3!0.52!2.34!PBX3;;chr11:65554528..65554546,+!p1@OVOL1!0.52!2.34!OVOL1;;chr12:26277798..26277809,-!p5@BHLHE41!0.52!2.34!BHLHE41;;chrX:129244454..129244488,-!p1@ELF4!0.51!21.06!ELF4;;chr6:41703296..41703367,-!p1@TFEB!0.51!14.51!TFEB;;chr6:7108179..7108199,+!p4@RREB1!0.51!5.38!RREB1;;chr4:144435112..144435176,+!p3@SMARCA5!0.51!5.38!SMARCA5;;chr1:8484007..8484061,-!p13@RERE!0.51!3.04!RERE;;chr13:45010939..45011033,-!p1@TSC22D1!0.50!189.08!TSC22D1;;chr2:178129414..178129517,-!p1@NFE2L2!0.50!113.73!NFE2L2;;chr14:21566731..21566836,-!p1@ZNF219!0.50!30.65!ZNF219;;chr11:13299319..13299424,+!p1@ARNTL!0.50!28.31!ARNTL;;chr19:926001..926046,+!p1@ARID3A!0.50!9.36!ARID3A;;chr9:73028387..73028418,-!p4@KLF9!0.50!5.15!KLF9;;chr19:12902289..12902307,+!p1@JUNB!0.49!646.09!JUNB;;chr2:8822176..8822196,+!p1@ID2!0.49!399.91!ID2;;chrX:131623044..131623089,-!p1@MBNL3!0.49!11.00!MBNL3;;chr2:85197924..85197955,+!p3@KCMF1!0.49!9.83!KCMF1;;chr3:48282536..48282586,+!p2@ZNF589!0.49!7.02!ZNF589;;chr20:4880761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| ||
|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000222;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000234;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000235;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000576;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000738;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000763;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000766;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000988;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002193;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002390;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002405 | |||
|ffid_belonging_in_development=CL:0000049,CL:0000134 | |||
|fonse_cell_line= | |fonse_cell_line= | ||
|fonse_cell_line_closure= | |fonse_cell_line_closure= | ||
| Line 35: | Line 44: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Macrophage%2520-%2520monocyte%2520derived%252c%2520donor2.CNhs11899.11313-117C8.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Macrophage%2520-%2520monocyte%2520derived%252c%2520donor2.CNhs11899.11313-117C8.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Macrophage%2520-%2520monocyte%2520derived%252c%2520donor2.CNhs11899.11313-117C8.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Macrophage%2520-%2520monocyte%2520derived%252c%2520donor2.CNhs11899.11313-117C8.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Macrophage%2520-%2520monocyte%2520derived%252c%2520donor2.CNhs11899.11313-117C8.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:11313-117C8 | |id=FF:11313-117C8 | ||
|is_a=EFO:0002091;;FF: | |is_a=EFO:0002091;;FF:0000086 | ||
|is_obsolete= | |||
|library_id=CNhs11899 | |||
|library_id_phase_based=2:CNhs11899 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11313 | |||
|microRNAs_nonnovel_srna=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2016/vis_viewer/#/human#srna;sample;SRhi10012.AGTTCC.11313 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11313 | |||
|microRNAs_novel_srna=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2016/vis_viewer_novel/#/human#srna;sample;SRhi10012.AGTTCC.11313 | |||
|name=Macrophage - monocyte derived, donor2 | |name=Macrophage - monocyte derived, donor2 | ||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
| Line 42: | Line 65: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs11899,LSID834,release010,COMPLETED | |profile_hcage=CNhs11899,LSID834,release010,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=SRhi10012,,, | |profile_srnaseq=SRhi10012,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
|repeat_enrich_byfamily=0,0,0.045658330384768,0,0,0.091316660769536,0,0.00641054909183139,0,-0.0981368132877125,-0.282403560576942,0,0.166728579178217,0,0,0,0,0,0,0,0.421279706377774,0.736084099350701,0,0,0.0134055688297899,0,0,0,0,0,-0.0979578962680575,0,0,-0.132956589778862,0,0,0,0,0,0,0,0,0,0,0,0,0.0526863104160746,0,0,0,0,0,0,0,0,-0.0242150211128343,0,0,0,0,0,-0.0430885744117231,0,-0.0969923612426051,0,0,-0.097343627213097,0,0,0,0,0,0,0,0,0,0,0,0,0,0.697061217969656,0,0,0,0,0,0,0,0,0,0,-0.523171498421834,0.045658330384768,0,0,-0.128559283631191,-0.211197402695869,0.045658330384768,0,0,0,0.068693227940511,-0.047160540031359,0,0,0,0,0,0.045658330384768,0,0,0,0,0,0,0,0,0,0,0,0.18020653067397,0,0,0,0,0.068071592110121,0,0,0,0,0,0 | |||
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| |||
|rna_box=117 | |rna_box=117 | ||
|rna_catalog_number=3H100-80-10 | |rna_catalog_number=3H100-80-10 | ||
| Line 56: | Line 82: | ||
|rna_tube_id=117C8 | |rna_tube_id=117C8 | ||
|rna_weight_ug=10 | |rna_weight_ug=10 | ||
|rnaseq_library_id=SRhi10012.AGTTCC | |||
|sample_age=46 | |sample_age=46 | ||
|sample_category=primary cells | |||
|sample_cell_catalog=N/A | |sample_cell_catalog=N/A | ||
|sample_cell_line= | |sample_cell_line= | ||
| Line 69: | Line 97: | ||
|sample_ethnicity=C | |sample_ethnicity=C | ||
|sample_experimental_condition= | |sample_experimental_condition= | ||
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;1.82372244748219e-229!GO:0005737;cytoplasm;1.43674048044915e-185!GO:0044444;cytoplasmic part;5.68082957653533e-149!GO:0043227;membrane-bound organelle;2.80061178628556e-145!GO:0043231;intracellular membrane-bound organelle;4.94324206805688e-145!GO:0043226;organelle;3.88378508583389e-133!GO:0043229;intracellular organelle;1.3702675919052e-132!GO:0044422;organelle part;7.26319696316123e-117!GO:0044446;intracellular organelle part;6.90788396338312e-115!GO:0032991;macromolecular complex;1.8370514658426e-78!GO:0005739;mitochondrion;3.54545437270035e-76!GO:0044237;cellular metabolic process;7.79272619241543e-72!GO:0044238;primary metabolic process;8.10575710471061e-69!GO:0031090;organelle membrane;1.52861846276904e-60!GO:0030529;ribonucleoprotein complex;3.13147333666614e-60!GO:0043170;macromolecule metabolic process;1.88366691285721e-55!GO:0043233;organelle lumen;4.63106981048138e-54!GO:0031974;membrane-enclosed lumen;4.63106981048138e-54!GO:0044429;mitochondrial part;2.11300385925891e-53!GO:0005515;protein binding;6.72946682751206e-53!GO:0003723;RNA binding;3.96128169127772e-51!GO:0033036;macromolecule localization;3.96128169127772e-51!GO:0015031;protein transport;4.13771203664388e-50!GO:0019538;protein metabolic process;7.23809831312219e-50!GO:0044428;nuclear part;1.25167687393684e-49!GO:0045184;establishment of protein localization;1.48962365900761e-49!GO:0008104;protein localization;7.02847693408111e-48!GO:0031967;organelle envelope;8.74628313287769e-46!GO:0031975;envelope;1.46780678746399e-45!GO:0044260;cellular macromolecule metabolic process;1.86629461535593e-45!GO:0009058;biosynthetic process;3.02282622204559e-45!GO:0044267;cellular protein metabolic process;8.24809329092138e-45!GO:0006412;translation;1.35861747442304e-43!GO:0043234;protein complex;8.44884164951545e-42!GO:0044249;cellular biosynthetic process;3.42186670589821e-40!GO:0005829;cytosol;7.17744453492142e-39!GO:0009059;macromolecule biosynthetic process;1.01987157751121e-37!GO:0046907;intracellular transport;5.85694257432788e-37!GO:0005740;mitochondrial envelope;9.54505010607903e-36!GO:0006396;RNA processing;2.70910021696614e-35!GO:0005840;ribosome;6.96489773911068e-35!GO:0016043;cellular component organization and biogenesis;1.09429820435987e-34!GO:0031966;mitochondrial membrane;3.4046362224852e-34!GO:0006886;intracellular protein transport;1.73985366505832e-33!GO:0005634;nucleus;1.277976682644e-32!GO:0019866;organelle inner membrane;8.00973764563717e-31!GO:0016071;mRNA metabolic process;3.76394214839061e-30!GO:0003735;structural constituent of ribosome;1.47617608118962e-29!GO:0051649;establishment of cellular localization;1.77602327800575e-29!GO:0005743;mitochondrial inner membrane;3.18318569234431e-29!GO:0051641;cellular localization;1.05882213601338e-28!GO:0006119;oxidative phosphorylation;4.75351108726894e-28!GO:0031981;nuclear lumen;3.18582212292731e-27!GO:0008380;RNA splicing;4.28484623402649e-27!GO:0006397;mRNA processing;5.1425034183685e-26!GO:0033279;ribosomal subunit;1.73217518200923e-25!GO:0065003;macromolecular complex assembly;1.95784030780417e-24!GO:0051186;cofactor metabolic process;3.34143558666026e-24!GO:0043283;biopolymer metabolic process;1.92084913400928e-22!GO:0012505;endomembrane system;3.23398534093501e-22!GO:0022613;ribonucleoprotein complex biogenesis and assembly;6.71285351861477e-22!GO:0006996;organelle organization and biogenesis;6.71285351861477e-22!GO:0000166;nucleotide binding;1.23189751188861e-21!GO:0022607;cellular component assembly;3.60174662071796e-21!GO:0044248;cellular catabolic process;5.48847732020451e-21!GO:0031980;mitochondrial lumen;7.10131144649903e-21!GO:0005759;mitochondrial matrix;7.10131144649903e-21!GO:0044455;mitochondrial membrane part;9.72704854531085e-21!GO:0048770;pigment granule;1.28351674965139e-20!GO:0042470;melanosome;1.28351674965139e-20!GO:0006732;coenzyme metabolic process;2.54917988755584e-20!GO:0005773;vacuole;2.67511824041303e-20!GO:0005681;spliceosome;3.19064852112037e-20!GO:0044265;cellular macromolecule catabolic process;4.71517625552626e-20!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;6.99454805638556e-20!GO:0016462;pyrophosphatase activity;8.33889422855526e-20!GO:0016817;hydrolase activity, acting on acid anhydrides;9.61975962217494e-20!GO:0017111;nucleoside-triphosphatase activity;3.32974558806412e-19!GO:0016192;vesicle-mediated transport;5.98661851016632e-19!GO:0005746;mitochondrial respiratory chain;9.32509622699179e-19!GO:0000323;lytic vacuole;3.50780102917308e-18!GO:0005764;lysosome;3.50780102917308e-18!GO:0006915;apoptosis;4.65556041177312e-18!GO:0005783;endoplasmic reticulum;4.97096067532975e-18!GO:0012501;programmed cell death;5.96534254949658e-18!GO:0009057;macromolecule catabolic process;7.21723112488278e-18!GO:0043285;biopolymer catabolic process;8.88550179861556e-18!GO:0017076;purine nucleotide binding;9.35096366087646e-18!GO:0005654;nucleoplasm;9.92842719945326e-18!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;1.95507504126082e-17!GO:0032553;ribonucleotide binding;4.35142195152592e-17!GO:0032555;purine ribonucleotide binding;4.35142195152592e-17!GO:0006457;protein folding;4.49874645314842e-17!GO:0016874;ligase activity;4.75541672354463e-17!GO:0008219;cell death;5.00204675543509e-17!GO:0016265;death;5.00204675543509e-17!GO:0044432;endoplasmic reticulum part;6.04338343980182e-17!GO:0005830;cytosolic ribosome (sensu Eukaryota);1.16553987058179e-16!GO:0005794;Golgi apparatus;1.26222993344324e-16!GO:0044445;cytosolic part;1.56682067847866e-16!GO:0000502;proteasome complex (sensu Eukaryota);2.19107579121026e-16!GO:0050136;NADH dehydrogenase (quinone) activity;2.34607764987495e-16!GO:0003954;NADH dehydrogenase activity;2.34607764987495e-16!GO:0008137;NADH dehydrogenase (ubiquinone) activity;2.34607764987495e-16!GO:0006259;DNA metabolic process;2.45842072960946e-16!GO:0006605;protein targeting;3.8197534581798e-16!GO:0051603;proteolysis involved in cellular protein catabolic process;6.0090672241417e-16!GO:0044257;cellular protein catabolic process;9.0721623224128e-16!GO:0019941;modification-dependent protein catabolic process;9.21599570003106e-16!GO:0043632;modification-dependent macromolecule catabolic process;9.21599570003106e-16!GO:0006512;ubiquitin cycle;9.30516896811301e-16!GO:0006511;ubiquitin-dependent protein catabolic process;1.1424899873367e-15!GO:0010467;gene expression;1.37585920344369e-15!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;2.37081636532034e-15!GO:0042775;organelle ATP synthesis coupled electron transport;2.3957926140669e-15!GO:0042773;ATP synthesis coupled electron transport;2.3957926140669e-15!GO:0009056;catabolic process;3.19553224199681e-15!GO:0022618;protein-RNA complex assembly;5.00799481532229e-15!GO:0030964;NADH dehydrogenase complex (quinone);7.38618912984994e-15!GO:0045271;respiratory chain complex I;7.38618912984994e-15!GO:0005747;mitochondrial respiratory chain complex I;7.38618912984994e-15!GO:0030163;protein catabolic process;1.42839905056501e-14!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;2.25117344981736e-14!GO:0016787;hydrolase activity;2.68674680909842e-14!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;3.87728259701487e-14!GO:0009055;electron carrier activity;4.78243252365157e-14!GO:0043412;biopolymer modification;9.47151133671684e-14!GO:0042175;nuclear envelope-endoplasmic reticulum network;1.01065110204905e-13!GO:0015935;small ribosomal subunit;1.27352647968422e-13!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;1.32208072707348e-13!GO:0005789;endoplasmic reticulum membrane;1.36598294585342e-13!GO:0043228;non-membrane-bound organelle;1.5040225576636e-13!GO:0043232;intracellular non-membrane-bound organelle;1.5040225576636e-13!GO:0048193;Golgi vesicle transport;1.51605619215694e-13!GO:0044451;nucleoplasm part;2.28028998035017e-13!GO:0030554;adenyl nucleotide binding;5.14575804321776e-13!GO:0006163;purine nucleotide metabolic process;7.39819700755445e-13!GO:0009259;ribonucleotide metabolic process;7.54595122517247e-13!GO:0015934;large ribosomal subunit;8.16085542143853e-13!GO:0051188;cofactor biosynthetic process;8.22190791361895e-13!GO:0051082;unfolded protein binding;8.42624838368923e-13!GO:0016887;ATPase activity;1.28339493521898e-12!GO:0005524;ATP binding;1.51493187451373e-12!GO:0009150;purine ribonucleotide metabolic process;1.54275819222909e-12!GO:0032559;adenyl ribonucleotide binding;1.60020401469065e-12!GO:0015078;hydrogen ion transmembrane transporter activity;1.70905842276608e-12!GO:0005761;mitochondrial ribosome;1.83179163750821e-12!GO:0000313;organellar ribosome;1.83179163750821e-12!GO:0006464;protein modification process;1.9462337120725e-12!GO:0042623;ATPase activity, coupled;2.22298441470236e-12!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;2.24096243670901e-12!GO:0019829;cation-transporting ATPase activity;2.97927102537434e-12!GO:0006974;response to DNA damage stimulus;3.27070451060941e-12!GO:0007049;cell cycle;3.48645027259587e-12!GO:0042981;regulation of apoptosis;4.04237204712675e-12!GO:0006164;purine nucleotide biosynthetic process;6.07548152603327e-12!GO:0005768;endosome;6.27991651327434e-12!GO:0043067;regulation of programmed cell death;7.56948134030555e-12!GO:0015986;ATP synthesis coupled proton transport;7.56948134030555e-12!GO:0015985;energy coupled proton transport, down electrochemical gradient;7.56948134030555e-12!GO:0009152;purine ribonucleotide biosynthetic process;1.22617466296473e-11!GO:0008135;translation factor activity, nucleic acid binding;1.24032685226125e-11!GO:0016491;oxidoreductase activity;1.34058585842057e-11!GO:0009260;ribonucleotide biosynthetic process;1.6000729699105e-11!GO:0007249;I-kappaB kinase/NF-kappaB cascade;1.62003694852321e-11!GO:0006913;nucleocytoplasmic transport;2.48735308314586e-11!GO:0005635;nuclear envelope;4.03026007220582e-11!GO:0051169;nuclear transport;4.94643456564578e-11!GO:0009199;ribonucleoside triphosphate metabolic process;6.37977170843866e-11!GO:0009205;purine ribonucleoside triphosphate metabolic process;6.61182753257734e-11!GO:0009144;purine nucleoside triphosphate metabolic process;6.61182753257734e-11!GO:0005730;nucleolus;7.57097718990041e-11!GO:0009060;aerobic respiration;7.96180405712725e-11!GO:0009108;coenzyme biosynthetic process;9.09339424528688e-11!GO:0046034;ATP metabolic process;1.02274518233149e-10!GO:0008134;transcription factor binding;1.23123343778358e-10!GO:0009141;nucleoside triphosphate metabolic process;1.40067585881474e-10!GO:0043687;post-translational protein modification;1.5695742912415e-10!GO:0016469;proton-transporting two-sector ATPase complex;1.75393343548192e-10!GO:0006754;ATP biosynthetic process;1.99987119146876e-10!GO:0006753;nucleoside phosphate metabolic process;1.99987119146876e-10!GO:0009142;nucleoside triphosphate biosynthetic process;2.05378444843363e-10!GO:0009201;ribonucleoside triphosphate biosynthetic process;2.05378444843363e-10!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;2.06503198984626e-10!GO:0009145;purine nucleoside triphosphate biosynthetic process;2.06503198984626e-10!GO:0015077;monovalent inorganic cation transmembrane transporter activity;2.60899184870214e-10!GO:0016604;nuclear body;2.88273706361362e-10!GO:0051246;regulation of protein metabolic process;3.61796816398289e-10!GO:0006413;translational initiation;6.48472738565012e-10!GO:0006281;DNA repair;6.80933138323774e-10!GO:0006950;response to stress;7.18440050168084e-10!GO:0003743;translation initiation factor activity;7.23326347166332e-10!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;7.23326347166332e-10!GO:0045333;cellular respiration;9.23277411675151e-10!GO:0006446;regulation of translational initiation;1.08701286219515e-09!GO:0000398;nuclear mRNA splicing, via spliceosome;1.08701286219515e-09!GO:0000375;RNA splicing, via transesterification reactions;1.08701286219515e-09!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;1.08701286219515e-09!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;1.75288116706394e-09!GO:0006461;protein complex assembly;2.21998710480742e-09!GO:0008565;protein transporter activity;2.27161148404228e-09!GO:0008639;small protein conjugating enzyme activity;2.39719981005472e-09!GO:0006091;generation of precursor metabolites and energy;2.4004349661507e-09!GO:0031965;nuclear membrane;3.28120077808685e-09!GO:0005770;late endosome;3.36165548133134e-09!GO:0044453;nuclear membrane part;3.4462968411781e-09!GO:0005774;vacuolar membrane;4.03319104315598e-09!GO:0022402;cell cycle process;4.22686303353536e-09!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);4.59524024539549e-09!GO:0004842;ubiquitin-protein ligase activity;5.41279807535638e-09!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;6.36864983186328e-09!GO:0043069;negative regulation of programmed cell death;6.49959278564916e-09!GO:0017038;protein import;6.73231135114532e-09!GO:0006752;group transfer coenzyme metabolic process;6.94744621862447e-09!GO:0005793;ER-Golgi intermediate compartment;7.39867430004679e-09!GO:0019787;small conjugating protein ligase activity;7.84116784070733e-09!GO:0043066;negative regulation of apoptosis;7.99560961489614e-09!GO:0006099;tricarboxylic acid cycle;8.42334271234451e-09!GO:0046356;acetyl-CoA catabolic process;8.42334271234451e-09!GO:0009117;nucleotide metabolic process;8.73549834674274e-09!GO:0006084;acetyl-CoA metabolic process;1.19613564056053e-08!GO:0016607;nuclear speck;1.28147619319407e-08!GO:0009719;response to endogenous stimulus;1.28497379921135e-08!GO:0006793;phosphorus metabolic process;2.15916568499914e-08!GO:0006796;phosphate metabolic process;2.15916568499914e-08!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);2.37281282623369e-08!GO:0044437;vacuolar part;2.59712973755382e-08!GO:0005765;lysosomal membrane;2.91866124668632e-08!GO:0005643;nuclear pore;3.0529921465583e-08!GO:0051187;cofactor catabolic process;3.45675221500678e-08!GO:0016879;ligase activity, forming carbon-nitrogen bonds;4.11715645820168e-08!GO:0042254;ribosome biogenesis and assembly;4.45478506830169e-08!GO:0007243;protein kinase cascade;5.46150284820463e-08!GO:0065002;intracellular protein transport across a membrane;6.00148151360917e-08!GO:0005839;proteasome core complex (sensu Eukaryota);6.3982749407173e-08!GO:0016881;acid-amino acid ligase activity;6.45125274530262e-08!GO:0006888;ER to Golgi vesicle-mediated transport;7.72417811177271e-08!GO:0050657;nucleic acid transport;8.04217899324133e-08!GO:0051236;establishment of RNA localization;8.04217899324133e-08!GO:0050658;RNA transport;8.04217899324133e-08!GO:0006403;RNA localization;9.32667933009819e-08!GO:0006916;anti-apoptosis;9.6996088658671e-08!GO:0009109;coenzyme catabolic process;1.05305914035726e-07!GO:0031982;vesicle;1.33072771660866e-07!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;1.43162407714233e-07!GO:0006399;tRNA metabolic process;1.51078295405639e-07!GO:0022890;inorganic cation transmembrane transporter activity;1.62483569847193e-07!GO:0046930;pore complex;1.98950424761904e-07!GO:0044440;endosomal part;2.26114833346269e-07!GO:0010008;endosome membrane;2.26114833346269e-07!GO:0044431;Golgi apparatus part;2.52832980742725e-07!GO:0031988;membrane-bound vesicle;2.52832980742725e-07!GO:0030120;vesicle coat;2.57601543693279e-07!GO:0030662;coated vesicle membrane;2.57601543693279e-07!GO:0005525;GTP binding;2.81618229770754e-07!GO:0004298;threonine endopeptidase activity;2.92659766344467e-07!GO:0000278;mitotic cell cycle;3.24650876930953e-07!GO:0006818;hydrogen transport;3.43719766352618e-07!GO:0031252;leading edge;3.52834450651913e-07!GO:0044262;cellular carbohydrate metabolic process;3.95312608014151e-07!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;3.95312608014151e-07!GO:0015399;primary active transmembrane transporter activity;3.95312608014151e-07!GO:0016310;phosphorylation;4.0746151926393e-07!GO:0019752;carboxylic acid metabolic process;4.27618602711138e-07!GO:0008654;phospholipid biosynthetic process;5.15197321246315e-07!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;5.32882619310576e-07!GO:0006082;organic acid metabolic process;5.39920561732455e-07!GO:0031410;cytoplasmic vesicle;5.51354408199745e-07!GO:0015992;proton transport;5.51354408199745e-07!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;5.98827221171973e-07!GO:0004812;aminoacyl-tRNA ligase activity;5.98827221171973e-07!GO:0016875;ligase activity, forming carbon-oxygen bonds;5.98827221171973e-07!GO:0004386;helicase activity;6.40352506053633e-07!GO:0000074;regulation of progression through cell cycle;6.50319192477833e-07!GO:0005798;Golgi-associated vesicle;6.82329466345997e-07!GO:0007005;mitochondrion organization and biogenesis;7.12157025085756e-07!GO:0016023;cytoplasmic membrane-bound vesicle;7.43355172692627e-07!GO:0043038;amino acid activation;7.93464801545814e-07!GO:0006418;tRNA aminoacylation for protein translation;7.93464801545814e-07!GO:0043039;tRNA aminoacylation;7.93464801545814e-07!GO:0051726;regulation of cell cycle;9.508205445461e-07!GO:0007264;small GTPase mediated signal transduction;1.2408665127716e-06!GO:0051170;nuclear import;1.57236151818341e-06!GO:0048475;coated membrane;1.58348572722823e-06!GO:0030117;membrane coat;1.58348572722823e-06!GO:0045259;proton-transporting ATP synthase complex;1.67778161575068e-06!GO:0005694;chromosome;1.94439373706389e-06!GO:0051028;mRNA transport;1.97005305421931e-06!GO:0008026;ATP-dependent helicase activity;2.08814525333e-06!GO:0003697;single-stranded DNA binding;2.24663112966619e-06!GO:0043492;ATPase activity, coupled to movement of substances;2.25575934487866e-06!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;2.69136406318612e-06!GO:0007242;intracellular signaling cascade;2.73508809261938e-06!GO:0006606;protein import into nucleus;2.8750060532305e-06!GO:0016044;membrane organization and biogenesis;3.33647770607248e-06!GO:0008047;enzyme activator activity;3.82289741360334e-06!GO:0006417;regulation of translation;3.9538766517816e-06!GO:0019899;enzyme binding;4.07169883054011e-06!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;4.12247173188411e-06!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;4.62821169741839e-06!GO:0044255;cellular lipid metabolic process;5.64307779395623e-06!GO:0032561;guanyl ribonucleotide binding;6.15732916036954e-06!GO:0019001;guanyl nucleotide binding;6.15732916036954e-06!GO:0065009;regulation of a molecular function;6.24925912034612e-06!GO:0007033;vacuole organization and biogenesis;7.07493909050233e-06!GO:0009165;nucleotide biosynthetic process;7.07493909050233e-06!GO:0043566;structure-specific DNA binding;7.30703558242366e-06!GO:0044427;chromosomal part;8.10548495350903e-06!GO:0006643;membrane lipid metabolic process;8.52608313481501e-06!GO:0032940;secretion by cell;9.2270352800229e-06!GO:0006613;cotranslational protein targeting to membrane;9.65381567193985e-06!GO:0048523;negative regulation of cellular process;9.66094755002392e-06!GO:0007040;lysosome organization and biogenesis;1.02346103228607e-05!GO:0016740;transferase activity;1.0275513541341e-05!GO:0032446;protein modification by small protein conjugation;1.0275513541341e-05!GO:0016567;protein ubiquitination;1.08248949048341e-05!GO:0006260;DNA replication;1.09330928792985e-05!GO:0003924;GTPase activity;1.16626379150498e-05!GO:0022403;cell cycle phase;1.24935381310509e-05!GO:0006364;rRNA processing;1.65441044299005e-05!GO:0045454;cell redox homeostasis;1.88402103115506e-05!GO:0016072;rRNA metabolic process;1.96566258571552e-05!GO:0003712;transcription cofactor activity;2.03429977430934e-05!GO:0001726;ruffle;2.15237297853778e-05!GO:0009615;response to virus;2.29487467785287e-05!GO:0030532;small nuclear ribonucleoprotein complex;2.29691246776242e-05!GO:0000139;Golgi membrane;2.73314262829155e-05!GO:0005741;mitochondrial outer membrane;2.92814873172095e-05!GO:0016779;nucleotidyltransferase activity;3.05982828189601e-05!GO:0003676;nucleic acid binding;3.07448280841231e-05!GO:0031902;late endosome membrane;3.20110453529203e-05!GO:0045045;secretory pathway;3.29642584048637e-05!GO:0006650;glycerophospholipid metabolic process;3.60544889483407e-05!GO:0000087;M phase of mitotic cell cycle;3.61401383987841e-05!GO:0005769;early endosome;4.02259331970271e-05!GO:0051301;cell division;4.06012769500919e-05!GO:0051276;chromosome organization and biogenesis;4.09504094836645e-05!GO:0016853;isomerase activity;4.23037778143397e-05!GO:0000151;ubiquitin ligase complex;4.23539486714308e-05!GO:0031326;regulation of cellular biosynthetic process;4.3408946338054e-05!GO:0046519;sphingoid metabolic process;4.36875516178078e-05!GO:0006612;protein targeting to membrane;4.9188264452517e-05!GO:0009889;regulation of biosynthetic process;4.94755575813812e-05!GO:0007067;mitosis;4.98410399698679e-05!GO:0050662;coenzyme binding;5.28489535704534e-05!GO:0031968;organelle outer membrane;5.89247069810774e-05!GO:0006629;lipid metabolic process;5.9780066344394e-05!GO:0019867;outer membrane;6.15612453265304e-05!GO:0048519;negative regulation of biological process;6.23191587065955e-05!GO:0031202;RNA splicing factor activity, transesterification mechanism;6.53759519279426e-05!GO:0006672;ceramide metabolic process;6.75474551681456e-05!GO:0005096;GTPase activator activity;7.94447552396932e-05!GO:0015980;energy derivation by oxidation of organic compounds;8.17654529428416e-05!GO:0046483;heterocycle metabolic process;8.54414277782944e-05!GO:0043065;positive regulation of apoptosis;0.000110510099899045!GO:0008610;lipid biosynthetic process;0.000113971247716979!GO:0000245;spliceosome assembly;0.000120526671428509!GO:0005975;carbohydrate metabolic process;0.000121699768569807!GO:0005885;Arp2/3 protein complex;0.000138063369181864!GO:0033116;ER-Golgi intermediate compartment membrane;0.00014188798027358!GO:0006118;electron transport;0.000144562830481631!GO:0046474;glycerophospholipid biosynthetic process;0.000145275486685935!GO:0005788;endoplasmic reticulum lumen;0.000153511822126979!GO:0043068;positive regulation of programmed cell death;0.000162054221970567!GO:0006325;establishment and/or maintenance of chromatin architecture;0.000172041623605926!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000177340245794206!GO:0016197;endosome transport;0.00018245956373346!GO:0005762;mitochondrial large ribosomal subunit;0.000186804945586149!GO:0000315;organellar large ribosomal subunit;0.000186804945586149!GO:0006644;phospholipid metabolic process;0.000188326148285422!GO:0043623;cellular protein complex assembly;0.000189059354407829!GO:0046467;membrane lipid biosynthetic process;0.000219532730511166!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.000233964298290639!GO:0030036;actin cytoskeleton organization and biogenesis;0.000265423775534536!GO:0030384;phosphoinositide metabolic process;0.000265423775534536!GO:0051168;nuclear export;0.000295262253713762!GO:0009967;positive regulation of signal transduction;0.000309510267689735!GO:0030695;GTPase regulator activity;0.000316903601487421!GO:0005813;centrosome;0.00032513580921932!GO:0043021;ribonucleoprotein binding;0.000347712073994074!GO:0006323;DNA packaging;0.000352538922010143!GO:0007034;vacuolar transport;0.000352676426109914!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000366864177444467!GO:0003724;RNA helicase activity;0.000380065780687111!GO:0050790;regulation of catalytic activity;0.000430315561908617!GO:0051789;response to protein stimulus;0.000467649324410293!GO:0006986;response to unfolded protein;0.000467649324410293!GO:0030176;integral to endoplasmic reticulum membrane;0.000484870384597392!GO:0006749;glutathione metabolic process;0.000495302179535985!GO:0031072;heat shock protein binding;0.000572300132975099!GO:0046489;phosphoinositide biosynthetic process;0.00058294516171398!GO:0000279;M phase;0.000592755760208652!GO:0008234;cysteine-type peptidase activity;0.000655875461806159!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000665807264132337!GO:0030658;transport vesicle membrane;0.000680696721508061!GO:0000314;organellar small ribosomal subunit;0.00081504533776379!GO:0005763;mitochondrial small ribosomal subunit;0.00081504533776379!GO:0003713;transcription coactivator activity;0.000869325146914535!GO:0007265;Ras protein signal transduction;0.000869444673090804!GO:0045786;negative regulation of progression through cell cycle;0.000915578383462598!GO:0006807;nitrogen compound metabolic process;0.000950957464422657!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.000983471412615724!GO:0043087;regulation of GTPase activity;0.000993898069331676!GO:0005815;microtubule organizing center;0.00100721312771069!GO:0030133;transport vesicle;0.00101910931936269!GO:0016568;chromatin modification;0.00102053867529775!GO:0006897;endocytosis;0.00102561704261382!GO:0010324;membrane invagination;0.00102561704261382!GO:0051540;metal cluster binding;0.0010342458489788!GO:0051536;iron-sulfur cluster binding;0.0010342458489788!GO:0006891;intra-Golgi vesicle-mediated transport;0.00104830643874115!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00105945482442144!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00105945482442144!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00105945482442144!GO:0005083;small GTPase regulator activity;0.00107196766894252!GO:0007006;mitochondrial membrane organization and biogenesis;0.00114179581841979!GO:0006333;chromatin assembly or disassembly;0.00115454170182344!GO:0015630;microtubule cytoskeleton;0.00120638777517129!GO:0006635;fatty acid beta-oxidation;0.00126290294038604!GO:0006917;induction of apoptosis;0.00126290294038604!GO:0051336;regulation of hydrolase activity;0.00129358767480482!GO:0030029;actin filament-based process;0.0013725150628905!GO:0000785;chromatin;0.00138835762736405!GO:0030660;Golgi-associated vesicle membrane;0.001405276748025!GO:0019318;hexose metabolic process;0.00146418210704181!GO:0030027;lamellipodium;0.00155773261987049!GO:0043681;protein import into mitochondrion;0.00162443379862262!GO:0006310;DNA recombination;0.00163823358997395!GO:0016070;RNA metabolic process;0.00164005931221199!GO:0065004;protein-DNA complex assembly;0.00173455626911066!GO:0012502;induction of programmed cell death;0.00175253558352929!GO:0005996;monosaccharide metabolic process;0.00178255320396863!GO:0006626;protein targeting to mitochondrion;0.00181992442074692!GO:0051427;hormone receptor binding;0.00204120249840792!GO:0016126;sterol biosynthetic process;0.00211579796806439!GO:0048487;beta-tubulin binding;0.00223264663416681!GO:0048037;cofactor binding;0.00232158890791609!GO:0008632;apoptotic program;0.00235034152386727!GO:0005777;peroxisome;0.00235166460898766!GO:0042579;microbody;0.00235166460898766!GO:0005099;Ras GTPase activator activity;0.00235166460898766!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00237679799891717!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00256159541365039!GO:0015002;heme-copper terminal oxidase activity;0.00256159541365039!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00256159541365039!GO:0004129;cytochrome-c oxidase activity;0.00256159541365039!GO:0006302;double-strand break repair;0.00270276508038695!GO:0006767;water-soluble vitamin metabolic process;0.00277084936523754!GO:0004197;cysteine-type endopeptidase activity;0.0027730629935973!GO:0006401;RNA catabolic process;0.0028207515606223!GO:0032787;monocarboxylic acid metabolic process;0.00293922115005333!GO:0030663;COPI coated vesicle membrane;0.00298375655747803!GO:0030126;COPI vesicle coat;0.00298375655747803!GO:0048522;positive regulation of cellular process;0.00305055124247453!GO:0000287;magnesium ion binding;0.00307364232135107!GO:0048500;signal recognition particle;0.003115965195502!GO:0015036;disulfide oxidoreductase activity;0.00314160601974242!GO:0002474;antigen processing and presentation of peptide antigen via MHC class I;0.00319172905790217!GO:0051920;peroxiredoxin activity;0.00323535049273708!GO:0006607;NLS-bearing substrate import into nucleus;0.00325406878806782!GO:0007041;lysosomal transport;0.00328109838250478!GO:0003729;mRNA binding;0.00331839344335784!GO:0003690;double-stranded DNA binding;0.00333788194734805!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00333788194734805!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00333788194734805!GO:0009308;amine metabolic process;0.00345164638773719!GO:0035257;nuclear hormone receptor binding;0.00346118715864475!GO:0051287;NAD binding;0.0034659264874171!GO:0016859;cis-trans isomerase activity;0.00347938167625284!GO:0030867;rough endoplasmic reticulum membrane;0.00353493202785558!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.00356262190919884!GO:0030149;sphingolipid catabolic process;0.00365814699245738!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.00380871896485878!GO:0051539;4 iron, 4 sulfur cluster binding;0.00382813266629951!GO:0005048;signal sequence binding;0.00385342802517441!GO:0006839;mitochondrial transport;0.00395247390986161!GO:0048471;perinuclear region of cytoplasm;0.0039569732812199!GO:0019377;glycolipid catabolic process;0.00413155747853496!GO:0051329;interphase of mitotic cell cycle;0.00423837328608768!GO:0005852;eukaryotic translation initiation factor 3 complex;0.004319631690817!GO:0006979;response to oxidative stress;0.0043973564367485!GO:0006520;amino acid metabolic process;0.00442932072814762!GO:0051325;interphase;0.00462292518112996!GO:0006261;DNA-dependent DNA replication;0.00469683198206653!GO:0004229;gelatinase B activity;0.00474163232767816!GO:0008186;RNA-dependent ATPase activity;0.00477731301935908!GO:0016788;hydrolase activity, acting on ester bonds;0.00496937991020898!GO:0000096;sulfur amino acid metabolic process;0.00499510159935185!GO:0006007;glucose catabolic process;0.00507081912596816!GO:0006778;porphyrin metabolic process;0.00511172172198573!GO:0033013;tetrapyrrole metabolic process;0.00511172172198573!GO:0005905;coated pit;0.00515716857962634!GO:0015631;tubulin binding;0.00518408120945719!GO:0006497;protein amino acid lipidation;0.00534080376274458!GO:0042158;lipoprotein biosynthetic process;0.00535884171626288!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.0056095381357121!GO:0045047;protein targeting to ER;0.0056095381357121!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.00564032108118274!GO:0006402;mRNA catabolic process;0.0057796289723706!GO:0030137;COPI-coated vesicle;0.0059612369598388!GO:0006695;cholesterol biosynthetic process;0.00599841292766704!GO:0030503;regulation of cell redox homeostasis;0.00642742021975194!GO:0006631;fatty acid metabolic process;0.00646199830449275!GO:0042802;identical protein binding;0.00646199830449275!GO:0006733;oxidoreduction coenzyme metabolic process;0.00710486779945301!GO:0022406;membrane docking;0.00735975188547662!GO:0048278;vesicle docking;0.00735975188547662!GO:0006516;glycoprotein catabolic process;0.00736515944364118!GO:0032318;regulation of Ras GTPase activity;0.0073994194695979!GO:0030984;kininogen binding;0.00749646073837327!GO:0004213;cathepsin B activity;0.00749646073837327!GO:0006066;alcohol metabolic process;0.00757894155140344!GO:0044438;microbody part;0.00760641896265835!GO:0044439;peroxisomal part;0.00760641896265835!GO:0017166;vinculin binding;0.0078313271612718!GO:0030134;ER to Golgi transport vesicle;0.00790678783748163!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.00794591849386481!GO:0006006;glucose metabolic process;0.00808105949133173!GO:0006383;transcription from RNA polymerase III promoter;0.00824486451656083!GO:0005791;rough endoplasmic reticulum;0.00843163621175535!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00843413289850717!GO:0004177;aminopeptidase activity;0.00849749807716989!GO:0008139;nuclear localization sequence binding;0.00891829607527787!GO:0030118;clathrin coat;0.00925613748755182!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.00925656372640353!GO:0003899;DNA-directed RNA polymerase activity;0.00991046822150146!GO:0016860;intramolecular oxidoreductase activity;0.00991046822150146!GO:0008312;7S RNA binding;0.00991912054594175!GO:0031901;early endosome membrane;0.0100203685004167!GO:0046479;glycosphingolipid catabolic process;0.0103070337579453!GO:0030127;COPII vesicle coat;0.010465373996849!GO:0012507;ER to Golgi transport vesicle membrane;0.010465373996849!GO:0005869;dynactin complex;0.0105176021714332!GO:0006904;vesicle docking during exocytosis;0.0109726896415472!GO:0004004;ATP-dependent RNA helicase activity;0.0110753193509827!GO:0006740;NADPH regeneration;0.0111074822468525!GO:0006098;pentose-phosphate shunt;0.0111074822468525!GO:0000059;protein import into nucleus, docking;0.0111599325502144!GO:0006414;translational elongation;0.011263370975091!GO:0016614;oxidoreductase activity, acting on CH-OH group of donors;0.0113064669488033!GO:0016616;oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor;0.0113096884283003!GO:0000776;kinetochore;0.0114309475767759!GO:0009112;nucleobase metabolic process;0.0114423877951512!GO:0003725;double-stranded RNA binding;0.0116161501676364!GO:0031903;microbody membrane;0.0116785348954327!GO:0005778;peroxisomal membrane;0.0116785348954327!GO:0005657;replication fork;0.0117809858807368!GO:0044275;cellular carbohydrate catabolic process;0.0118030325307402!GO:0051252;regulation of RNA metabolic process;0.0118561574376501!GO:0008637;apoptotic mitochondrial changes;0.0123524436802417!GO:0006665;sphingolipid metabolic process;0.0124594114606303!GO:0032428;beta-N-acetylgalactosaminidase activity;0.0124850454834108!GO:0030290;sphingolipid activator protein activity;0.0124850454834108!GO:0016281;eukaryotic translation initiation factor 4F complex;0.0126748872002246!GO:0051219;phosphoprotein binding;0.0127816267162715!GO:0042168;heme metabolic process;0.0127816267162715!GO:0022415;viral reproductive process;0.0130986733505961!GO:0007162;negative regulation of cell adhesion;0.0133739566026857!GO:0051452;cellular pH reduction;0.0135972796736968!GO:0051453;regulation of cellular pH;0.0135972796736968!GO:0045851;pH reduction;0.0135972796736968!GO:0006914;autophagy;0.0137459407807063!GO:0045309;protein phosphorylated amino acid binding;0.0137551380802277!GO:0004518;nuclease activity;0.0139926122422296!GO:0030145;manganese ion binding;0.0140175906422216!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.0142823150380833!GO:0006595;polyamine metabolic process;0.0147865734762041!GO:0006509;membrane protein ectodomain proteolysis;0.0149646813929393!GO:0033619;membrane protein proteolysis;0.0149646813929393!GO:0048518;positive regulation of biological process;0.014995670297561!GO:0000339;RNA cap binding;0.0150698947909053!GO:0051881;regulation of mitochondrial membrane potential;0.0152594899517321!GO:0030140;trans-Golgi network transport vesicle;0.0152794239539687!GO:0006611;protein export from nucleus;0.0152918649133788!GO:0003988;acetyl-CoA C-acyltransferase activity;0.0154025726466863!GO:0030125;clathrin vesicle coat;0.0154946642954862!GO:0030665;clathrin coated vesicle membrane;0.0154946642954862!GO:0004185;serine carboxypeptidase activity;0.0158859125351676!GO:0005819;spindle;0.0159693500781085!GO:0005684;U2-dependent spliceosome;0.016005566612255!GO:0005637;nuclear inner membrane;0.0161234173940826!GO:0046822;regulation of nucleocytoplasmic transport;0.0162883219418296!GO:0005667;transcription factor complex;0.0163651479415702!GO:0006506;GPI anchor biosynthetic process;0.0166305791966776!GO:0000075;cell cycle checkpoint;0.0173658967746632!GO:0016564;transcription repressor activity;0.0176522170802767!GO:0004576;oligosaccharyl transferase activity;0.0176946680903116!GO:0051052;regulation of DNA metabolic process;0.0178664483353698!GO:0004448;isocitrate dehydrogenase activity;0.0179916749636021!GO:0031227;intrinsic to endoplasmic reticulum membrane;0.0180834393902832!GO:0006779;porphyrin biosynthetic process;0.0180834393902832!GO:0033014;tetrapyrrole biosynthetic process;0.0180834393902832!GO:0006366;transcription from RNA polymerase II promoter;0.018268943802395!GO:0009607;response to biotic stimulus;0.0186886249224277!GO:0016790;thiolester hydrolase activity;0.0186886249224277!GO:0019904;protein domain specific binding;0.0187909777927523!GO:0001784;phosphotyrosine binding;0.0189904300703356!GO:0006100;tricarboxylic acid cycle intermediate metabolic process;0.0190866381983237!GO:0050811;GABA receptor binding;0.0192134518447307!GO:0006518;peptide metabolic process;0.019598759307378!GO:0030132;clathrin coat of coated pit;0.0196459178024768!GO:0016251;general RNA polymerase II transcription factor activity;0.0197758515667895!GO:0006405;RNA export from nucleus;0.0199679984556312!GO:0051087;chaperone binding;0.0200859087761235!GO:0046466;membrane lipid catabolic process;0.0203386813687192!GO:0031625;ubiquitin protein ligase binding;0.0206558472207308!GO:0031301;integral to organelle membrane;0.0208104338318346!GO:0030508;thiol-disulfide exchange intermediate activity;0.0208720260205227!GO:0000082;G1/S transition of mitotic cell cycle;0.0211127638175917!GO:0050794;regulation of cellular process;0.0216205124028356!GO:0005758;mitochondrial intermembrane space;0.02174832868443!GO:0044452;nucleolar part;0.0222713033572762!GO:0004192;cathepsin D activity;0.0222713033572762!GO:0002376;immune system process;0.0225370627992635!GO:0019079;viral genome replication;0.0226126540678542!GO:0030880;RNA polymerase complex;0.0228921392528584!GO:0043488;regulation of mRNA stability;0.0230325412464174!GO:0043487;regulation of RNA stability;0.0230325412464174!GO:0000209;protein polyubiquitination;0.0231478542058026!GO:0009966;regulation of signal transduction;0.0231478542058026!GO:0008287;protein serine/threonine phosphatase complex;0.0231478542058026!GO:0008250;oligosaccharyl transferase complex;0.0231774579126021!GO:0007010;cytoskeleton organization and biogenesis;0.0233657248321538!GO:0006334;nucleosome assembly;0.0234018062801416!GO:0030119;AP-type membrane coat adaptor complex;0.0238879220123952!GO:0033033;negative regulation of myeloid cell apoptosis;0.0238879220123952!GO:0001803;regulation of type III hypersensitivity;0.0238879220123952!GO:0032733;positive regulation of interleukin-10 production;0.0238879220123952!GO:0033025;regulation of mast cell apoptosis;0.0238879220123952!GO:0001805;positive regulation of type III hypersensitivity;0.0238879220123952!GO:0033023;mast cell homeostasis;0.0238879220123952!GO:0002431;Fc receptor mediated stimulatory signaling pathway;0.0238879220123952!GO:0033032;regulation of myeloid cell apoptosis;0.0238879220123952!GO:0001802;type III hypersensitivity;0.0238879220123952!GO:0033028;myeloid cell apoptosis;0.0238879220123952!GO:0042590;antigen processing and presentation of exogenous peptide antigen via MHC class I;0.0238879220123952!GO:0033026;negative regulation of mast cell apoptosis;0.0238879220123952!GO:0033024;mast cell apoptosis;0.0238879220123952!GO:0008017;microtubule binding;0.0238879220123952!GO:0006790;sulfur metabolic process;0.023959731002567!GO:0006505;GPI anchor metabolic process;0.0248251479566802!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.0251975771510832!GO:0043022;ribosome binding;0.0251975771510832!GO:0016791;phosphoric monoester hydrolase activity;0.0253080899861191!GO:0008033;tRNA processing;0.0254380783594144!GO:0006465;signal peptide processing;0.0261437570781674!GO:0006458;'de novo' protein folding;0.0262722007867629!GO:0051084;'de novo' posttranslational protein folding;0.0262722007867629!GO:0016408;C-acyltransferase activity;0.0264162760316657!GO:0019395;fatty acid oxidation;0.0265965361717635!GO:0002504;antigen processing and presentation of peptide or polysaccharide antigen via MHC class II;0.0270917685117829!GO:0006661;phosphatidylinositol biosynthetic process;0.027237946831292!GO:0003684;damaged DNA binding;0.0273503667879331!GO:0005832;chaperonin-containing T-complex;0.0275726877691716!GO:0031497;chromatin assembly;0.0275726877691716!GO:0004218;cathepsin S activity;0.0277752333623209!GO:0004428;inositol or phosphatidylinositol kinase activity;0.0281559574295923!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.0283652176693735!GO:0046164;alcohol catabolic process;0.0284518147394075!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.0286910275509891!GO:0048468;cell development;0.0288154795674056!GO:0007050;cell cycle arrest;0.0291069097687458!GO:0003714;transcription corepressor activity;0.0291072925123585!GO:0002444;myeloid leukocyte mediated immunity;0.0296308024149025!GO:0046365;monosaccharide catabolic process;0.0296920331092756!GO:0005484;SNAP receptor activity;0.0299517718238839!GO:0031124;mRNA 3'-end processing;0.0299557283229737!GO:0006289;nucleotide-excision repair;0.030282936792173!GO:0018193;peptidyl-amino acid modification;0.0307634000961574!GO:0006769;nicotinamide metabolic process;0.03076382272157!GO:0016125;sterol metabolic process;0.0312415996328228!GO:0048002;antigen processing and presentation of peptide antigen;0.0313316578147149!GO:0001891;phagocytic cup;0.0313508292232224!GO:0006622;protein targeting to lysosome;0.0313975831376894!GO:0016667;oxidoreductase activity, acting on sulfur group of donors;0.0317922315420111!GO:0016272;prefoldin complex;0.031971832835545!GO:0030131;clathrin adaptor complex;0.0321934196611884!GO:0005152;interleukin-1 receptor antagonist activity;0.0332575214555795!GO:0030353;fibroblast growth factor receptor antagonist activity;0.0332575214555795!GO:0006689;ganglioside catabolic process;0.0332575214555795!GO:0030433;ER-associated protein catabolic process;0.033895465878358!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.033895465878358!GO:0032763;regulation of mast cell cytokine production;0.0341560935937825!GO:0032762;mast cell cytokine production;0.0341560935937825!GO:0046870;cadmium ion binding;0.0341605064656024!GO:0009116;nucleoside metabolic process;0.0342794234322064!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0346765665713276!GO:0005784;translocon complex;0.0348492415554891!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0349577573711164!GO:0010257;NADH dehydrogenase complex assembly;0.0349577573711164!GO:0033108;mitochondrial respiratory chain complex assembly;0.0349577573711164!GO:0016363;nuclear matrix;0.0349699829069417!GO:0000303;response to superoxide;0.0354728876964483!GO:0031970;organelle envelope lumen;0.0355415184699132!GO:0016563;transcription activator activity;0.0367659383049025!GO:0050749;apolipoprotein E receptor binding;0.0368886955519101!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.0371534957811031!GO:0000428;DNA-directed RNA polymerase complex;0.0371534957811031!GO:0051098;regulation of binding;0.0373630950549598!GO:0035035;histone acetyltransferase binding;0.0375255360751736!GO:0001573;ganglioside metabolic process;0.0376011611040777!GO:0006739;NADP metabolic process;0.0376572310856712!GO:0000152;nuclear ubiquitin ligase complex;0.0379432209983675!GO:0019362;pyridine nucleotide metabolic process;0.0387914635147028!GO:0003678;DNA helicase activity;0.0388895102670586!GO:0042987;amyloid precursor protein catabolic process;0.0397347450027367!GO:0035258;steroid hormone receptor binding;0.0400748742069646!GO:0004563;beta-N-acetylhexosaminidase activity;0.0404076109761056!GO:0006213;pyrimidine nucleoside metabolic process;0.0405302916555243!GO:0004674;protein serine/threonine kinase activity;0.0405701896340689!GO:0019320;hexose catabolic process;0.0411971611866921!GO:0008538;proteasome activator activity;0.0412565169111056!GO:0016311;dephosphorylation;0.0418613961212786!GO:0042157;lipoprotein metabolic process;0.0421373995241317!GO:0007021;tubulin folding;0.0421373995241317!GO:0006783;heme biosynthetic process;0.0421497058766756!GO:0009124;nucleoside monophosphate biosynthetic process;0.0438030210220655!GO:0009123;nucleoside monophosphate metabolic process;0.0438030210220655!GO:0007042;lysosomal lumen acidification;0.0438190879860642!GO:0009081;branched chain family amino acid metabolic process;0.0438190879860642!GO:0009161;ribonucleoside monophosphate metabolic process;0.0441359796126913!GO:0009156;ribonucleoside monophosphate biosynthetic process;0.0441359796126913!GO:0006519;amino acid and derivative metabolic process;0.0441359796126913!GO:0019058;viral infectious cycle;0.0445614974959386!GO:0047485;protein N-terminus binding;0.0446184644698559!GO:0015035;protein disulfide oxidoreductase activity;0.0448385118528883!GO:0000049;tRNA binding;0.0452415578051605!GO:0006633;fatty acid biosynthetic process;0.0452739269925631!GO:0015923;mannosidase activity;0.0454218422556768!GO:0003711;transcription elongation regulator activity;0.0454421677451648!GO:0051537;2 iron, 2 sulfur cluster binding;0.045667699216631!GO:0032760;positive regulation of tumor necrosis factor production;0.0456879022622338!GO:0004437;inositol or phosphatidylinositol phosphatase activity;0.0464746511949482!GO:0006984;ER-nuclear signaling pathway;0.0467894943071805!GO:0007030;Golgi organization and biogenesis;0.0468148935838822!GO:0042613;MHC class II protein complex;0.0473048646514955!GO:0005850;eukaryotic translation initiation factor 2 complex;0.0474561442122735!GO:0000305;response to oxygen radical;0.0477196409763781!GO:0008415;acyltransferase activity;0.0482888226627873!GO:0046488;phosphatidylinositol metabolic process;0.048977776935532!GO:0046394;carboxylic acid biosynthetic process;0.049003967916103!GO:0016053;organic acid biosynthetic process;0.049003967916103!GO:0008383;manganese superoxide dismutase activity;0.0490769930890101!GO:0001315;age-dependent response to reactive oxygen species;0.0490769930890101!GO:0000118;histone deacetylase complex;0.0493086939545559!GO:0018196;peptidyl-asparagine modification;0.0494096868041843!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.0494096868041843 | |||
|sample_id=11313 | |sample_id=11313 | ||
|sample_note= | |sample_note= | ||
| Line 76: | Line 105: | ||
|sample_tissue=blood | |sample_tissue=blood | ||
|top_motifs=SREBF1,2:2.14104587042;RXR{A,B,G}_{NR1H2,PPAR}dimers:1.87726625828;FOXP3:1.65981510002;TLX2:1.53840786041;SPI1:1.25861553948;GLI1..3:1.21579712159;NFE2L2:1.20328312668;MYOD1:1.20094264672;NKX2-2,8:1.1580768454;EN1,2:1.13023595108;PPARG:1.05178775938;SPIB:1.0298935766;DMAP1_NCOR{1,2}_SMARC:1.00726320483;ELF1,2,4:0.976053713009;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.962190033946;HLF:0.945543977117;ESR1:0.920288082533;ETS1,2:0.908977566682;IRF1,2:0.890172365007;NR6A1:0.812408078454;NFIL3:0.812150771702;IRF7:0.807768327009;RXRA_VDR{dimer}:0.776866156473;MTF1:0.765384070368;CRX:0.702909930161;FOXA2:0.699036495415;PAX2:0.671524292651;NR1H4:0.624494141893;EP300:0.598177092174;TFCP2:0.588885040096;NKX3-2:0.5643243347;AR:0.554057085985;FOSL2:0.551924284778;PAX8:0.533861192502;OCT4_SOX2{dimer}:0.514017368091;PAX5:0.483796596802;SPZ1:0.433930019681;ESRRA:0.390697621284;HES1:0.358681665887;NFE2L1:0.357016683287;STAT5{A,B}:0.349536150623;NANOG{mouse}:0.333690243181;SMAD1..7,9:0.333345722883;TFAP4:0.317201868493;STAT2,4,6:0.297445656269;HSF1,2:0.295557000403;HNF4A_NR2F1,2:0.278131659888;GZF1:0.204477227099;RUNX1..3:0.193824058148;HMX1:0.188554668984;TGIF1:0.183445513338;FOX{F1,F2,J1}:0.171970663551;ZBTB16:0.169521281478;TBP:0.168848914292;ALX4:0.160489496141;FOXO1,3,4:0.147338010077;EBF1:0.146096881586;NFKB1_REL_RELA:0.145207898954;STAT1,3:0.137983052927;NFE2:0.118084377514;NKX2-3_NKX2-5:0.104236320002;LHX3,4:0.075564939203;PRRX1,2:0.0407927236848;IKZF2:0.0289915934972;NFIX:0.0273998174288;FOS_FOS{B,L1}_JUN{B,D}:0.0260827548331;ARID5B:0.023808263515;ALX1:0.0188259449484;ZNF148:0.00456666113165;ELK1,4_GABP{A,B1}:-0.0299070625353;FOXD3:-0.0325502213586;GATA4:-0.0401780720831;PRDM1:-0.0431236669244;FOXN1:-0.0590971513724;CDX1,2,4:-0.0599972184144;HBP1_HMGB_SSRP1_UBTF:-0.0611649147975;CEBPA,B_DDIT3:-0.0768742855874;YY1:-0.0849971822043;MYB:-0.0881505767273;VSX1,2:-0.105530631768;PAX6:-0.119306582218;XCPE1{core}:-0.13261541583;BACH2:-0.140799448257;TAL1_TCF{3,4,12}:-0.144117085822;NRF1:-0.144720501009;HAND1,2:-0.161777382654;NR5A1,2:-0.174286433118;GATA6:-0.176239624113;HOXA9_MEIS1:-0.18015984016;POU3F1..4:-0.181230061365;SP1:-0.196640359157;KLF4:-0.223202484468;ZNF143:-0.224846104542;CUX2:-0.230137439832;MEF2{A,B,C,D}:-0.252717503002;MYFfamily:-0.265861284477;ZEB1:-0.270309851856;NHLH1,2:-0.28018131662;HMGA1,2:-0.285847374568;ZFP161:-0.298241924825;ATF5_CREB3:-0.304598279534;PAX3,7:-0.310080796711;HNF1A:-0.336377162164;RFX2..5_RFXANK_RFXAP:-0.344924350963;ATF2:-0.359183396402;LMO2:-0.370139389427;FOXP1:-0.395091634364;NFY{A,B,C}:-0.401881439584;E2F1..5:-0.409264691575;POU1F1:-0.443799904111;SRF:-0.480679886002;CREB1:-0.486056008002;bHLH_family:-0.486977461346;EGR1..3:-0.489073678064;ATF4:-0.491503135158;HOX{A4,D4}:-0.499515175083;HOX{A5,B5}:-0.517088626889;TEF:-0.529722834097;MYBL2:-0.536507076141;JUN:-0.563631258952;POU5F1:-0.574180520151;SNAI1..3:-0.576610503938;PAX1,9:-0.576807396736;MAFB:-0.579966206738;ONECUT1,2:-0.598881288622;HIF1A:-0.60259079698;ZNF238:-0.607337332015;POU6F1:-0.608988567331;REST:-0.615341852984;SOX2:-0.62120994351;NANOG:-0.626671142052;GFI1:-0.636707282849;ZBTB6:-0.642529352712;XBP1:-0.708989565337;FOX{D1,D2}:-0.732164013225;T:-0.743754978248;TFDP1:-0.758233892264;NKX6-1,2:-0.759768627706;HIC1:-0.784984995399;ATF6:-0.790470322165;TLX1..3_NFIC{dimer}:-0.794261286996;FOX{I1,J2}:-0.801099452034;NFATC1..3:-0.803807553009;MTE{core}:-0.805050860608;NKX3-1:-0.805169201152;MAZ:-0.814691885626;NR3C1:-0.814962570875;UFEwm:-0.837557107843;GFI1B:-0.845956246577;RREB1:-0.880586534758;SOX{8,9,10}:-0.884888029399;TBX4,5:-0.901638722854;ADNP_IRX_SIX_ZHX:-0.904181514788;SOX17:-0.909000355521;GTF2I:-0.911129710773;TFAP2B:-0.913017906797;TEAD1:-0.924043710093;RORA:-0.932738790999;ZNF423:-0.93984759287;PAX4:-0.944151987902;PDX1:-0.961376073199;HOX{A6,A7,B6,B7}:-0.991700711505;TFAP2{A,C}:-1.01095895401;RXR{A,B,G}:-1.01839334853;EVI1:-1.03360473081;PITX1..3:-1.03832625727;IKZF1:-1.03902837579;MED-1{core}:-1.09764643679;TOPORS:-1.09953308511;BREu{core}:-1.12326365877;GTF2A1,2:-1.16140143639;DBP:-1.1714180915;TP53:-1.19494510041;SOX5:-1.19712772185;RFX1:-1.19753350803;PATZ1:-1.23326742877;GCM1,2:-1.25544145306;CDC5L:-1.25704247764;AHR_ARNT_ARNT2:-1.28996679204;ZIC1..3:-1.34079077669;FOXQ1:-1.39173346295;FOXM1:-1.40590600735;PBX1:-1.46763769994;POU2F1..3:-1.48241928658;LEF1_TCF7_TCF7L1,2:-1.48973447813;BPTF:-1.54737652257;MZF1:-1.57839566764;ZNF384:-1.71094708026;RBPJ:-1.78489266008;NKX2-1,4:-1.93237146712;AIRE:-1.98691199504;FOXL1:-2.13260335341 | |top_motifs=SREBF1,2:2.14104587042;RXR{A,B,G}_{NR1H2,PPAR}dimers:1.87726625828;FOXP3:1.65981510002;TLX2:1.53840786041;SPI1:1.25861553948;GLI1..3:1.21579712159;NFE2L2:1.20328312668;MYOD1:1.20094264672;NKX2-2,8:1.1580768454;EN1,2:1.13023595108;PPARG:1.05178775938;SPIB:1.0298935766;DMAP1_NCOR{1,2}_SMARC:1.00726320483;ELF1,2,4:0.976053713009;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.962190033946;HLF:0.945543977117;ESR1:0.920288082533;ETS1,2:0.908977566682;IRF1,2:0.890172365007;NR6A1:0.812408078454;NFIL3:0.812150771702;IRF7:0.807768327009;RXRA_VDR{dimer}:0.776866156473;MTF1:0.765384070368;CRX:0.702909930161;FOXA2:0.699036495415;PAX2:0.671524292651;NR1H4:0.624494141893;EP300:0.598177092174;TFCP2:0.588885040096;NKX3-2:0.5643243347;AR:0.554057085985;FOSL2:0.551924284778;PAX8:0.533861192502;OCT4_SOX2{dimer}:0.514017368091;PAX5:0.483796596802;SPZ1:0.433930019681;ESRRA:0.390697621284;HES1:0.358681665887;NFE2L1:0.357016683287;STAT5{A,B}:0.349536150623;NANOG{mouse}:0.333690243181;SMAD1..7,9:0.333345722883;TFAP4:0.317201868493;STAT2,4,6:0.297445656269;HSF1,2:0.295557000403;HNF4A_NR2F1,2:0.278131659888;GZF1:0.204477227099;RUNX1..3:0.193824058148;HMX1:0.188554668984;TGIF1:0.183445513338;FOX{F1,F2,J1}:0.171970663551;ZBTB16:0.169521281478;TBP:0.168848914292;ALX4:0.160489496141;FOXO1,3,4:0.147338010077;EBF1:0.146096881586;NFKB1_REL_RELA:0.145207898954;STAT1,3:0.137983052927;NFE2:0.118084377514;NKX2-3_NKX2-5:0.104236320002;LHX3,4:0.075564939203;PRRX1,2:0.0407927236848;IKZF2:0.0289915934972;NFIX:0.0273998174288;FOS_FOS{B,L1}_JUN{B,D}:0.0260827548331;ARID5B:0.023808263515;ALX1:0.0188259449484;ZNF148:0.00456666113165;ELK1,4_GABP{A,B1}:-0.0299070625353;FOXD3:-0.0325502213586;GATA4:-0.0401780720831;PRDM1:-0.0431236669244;FOXN1:-0.0590971513724;CDX1,2,4:-0.0599972184144;HBP1_HMGB_SSRP1_UBTF:-0.0611649147975;CEBPA,B_DDIT3:-0.0768742855874;YY1:-0.0849971822043;MYB:-0.0881505767273;VSX1,2:-0.105530631768;PAX6:-0.119306582218;XCPE1{core}:-0.13261541583;BACH2:-0.140799448257;TAL1_TCF{3,4,12}:-0.144117085822;NRF1:-0.144720501009;HAND1,2:-0.161777382654;NR5A1,2:-0.174286433118;GATA6:-0.176239624113;HOXA9_MEIS1:-0.18015984016;POU3F1..4:-0.181230061365;SP1:-0.196640359157;KLF4:-0.223202484468;ZNF143:-0.224846104542;CUX2:-0.230137439832;MEF2{A,B,C,D}:-0.252717503002;MYFfamily:-0.265861284477;ZEB1:-0.270309851856;NHLH1,2:-0.28018131662;HMGA1,2:-0.285847374568;ZFP161:-0.298241924825;ATF5_CREB3:-0.304598279534;PAX3,7:-0.310080796711;HNF1A:-0.336377162164;RFX2..5_RFXANK_RFXAP:-0.344924350963;ATF2:-0.359183396402;LMO2:-0.370139389427;FOXP1:-0.395091634364;NFY{A,B,C}:-0.401881439584;E2F1..5:-0.409264691575;POU1F1:-0.443799904111;SRF:-0.480679886002;CREB1:-0.486056008002;bHLH_family:-0.486977461346;EGR1..3:-0.489073678064;ATF4:-0.491503135158;HOX{A4,D4}:-0.499515175083;HOX{A5,B5}:-0.517088626889;TEF:-0.529722834097;MYBL2:-0.536507076141;JUN:-0.563631258952;POU5F1:-0.574180520151;SNAI1..3:-0.576610503938;PAX1,9:-0.576807396736;MAFB:-0.579966206738;ONECUT1,2:-0.598881288622;HIF1A:-0.60259079698;ZNF238:-0.607337332015;POU6F1:-0.608988567331;REST:-0.615341852984;SOX2:-0.62120994351;NANOG:-0.626671142052;GFI1:-0.636707282849;ZBTB6:-0.642529352712;XBP1:-0.708989565337;FOX{D1,D2}:-0.732164013225;T:-0.743754978248;TFDP1:-0.758233892264;NKX6-1,2:-0.759768627706;HIC1:-0.784984995399;ATF6:-0.790470322165;TLX1..3_NFIC{dimer}:-0.794261286996;FOX{I1,J2}:-0.801099452034;NFATC1..3:-0.803807553009;MTE{core}:-0.805050860608;NKX3-1:-0.805169201152;MAZ:-0.814691885626;NR3C1:-0.814962570875;UFEwm:-0.837557107843;GFI1B:-0.845956246577;RREB1:-0.880586534758;SOX{8,9,10}:-0.884888029399;TBX4,5:-0.901638722854;ADNP_IRX_SIX_ZHX:-0.904181514788;SOX17:-0.909000355521;GTF2I:-0.911129710773;TFAP2B:-0.913017906797;TEAD1:-0.924043710093;RORA:-0.932738790999;ZNF423:-0.93984759287;PAX4:-0.944151987902;PDX1:-0.961376073199;HOX{A6,A7,B6,B7}:-0.991700711505;TFAP2{A,C}:-1.01095895401;RXR{A,B,G}:-1.01839334853;EVI1:-1.03360473081;PITX1..3:-1.03832625727;IKZF1:-1.03902837579;MED-1{core}:-1.09764643679;TOPORS:-1.09953308511;BREu{core}:-1.12326365877;GTF2A1,2:-1.16140143639;DBP:-1.1714180915;TP53:-1.19494510041;SOX5:-1.19712772185;RFX1:-1.19753350803;PATZ1:-1.23326742877;GCM1,2:-1.25544145306;CDC5L:-1.25704247764;AHR_ARNT_ARNT2:-1.28996679204;ZIC1..3:-1.34079077669;FOXQ1:-1.39173346295;FOXM1:-1.40590600735;PBX1:-1.46763769994;POU2F1..3:-1.48241928658;LEF1_TCF7_TCF7L1,2:-1.48973447813;BPTF:-1.54737652257;MZF1:-1.57839566764;ZNF384:-1.71094708026;RBPJ:-1.78489266008;NKX2-1,4:-1.93237146712;AIRE:-1.98691199504;FOXL1:-2.13260335341 | ||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11313-117C8;search_select_hide=table117:FF:11313-117C8 | |||
}} | }} | ||
Latest revision as of 16:32, 3 June 2020
| Name: | Macrophage - monocyte derived, donor2 |
|---|---|
| Species: | Human (Homo sapiens) |
| Library ID: | CNhs11899 |
| Sample type: | primary cells |
| Genomic View: | UCSC |
| RefEX: | Specific genes |
| FANTOM CAT: | 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11 |
| CAGEd-oPOSSUM: | link |
| ZENBU report : | link |
| Additional information | ||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Sample information
RNA information
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| CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
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| Download raw sequence, BAM & CTSS | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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| RNA-Seq Accession numbers | ||||||||||||||||||||||||||||||||
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs11899
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs11899
| Novel motif | Logo | P-value |
|---|---|---|
| 1 | 1 | 0.0393 |
| 10 | 10 | 0.0393 |
| 100 | 100 | 0.942 |
| 101 | 101 | 0.534 |
| 102 | 102 | 0.465 |
| 103 | 103 | 0.11 |
| 104 | 104 | 0.373 |
| 105 | 105 | 0.684 |
| 106 | 106 | 0.106 |
| 107 | 107 | 0.477 |
| 108 | 108 | 0.877 |
| 109 | 109 | 0.00362 |
| 11 | 11 | 0.0737 |
| 110 | 110 | 0.12 |
| 111 | 111 | 0.0113 |
| 112 | 112 | 0.0653 |
| 113 | 113 | 0.626 |
| 114 | 114 | 0.0226 |
| 115 | 115 | 0.486 |
| 116 | 116 | 0.535 |
| 117 | 117 | 0.0401 |
| 118 | 118 | 0.285 |
| 119 | 119 | 0.11 |
| 12 | 12 | 0.553 |
| 120 | 120 | 0.823 |
| 121 | 121 | 0.859 |
| 122 | 122 | 0.419 |
| 123 | 123 | 0.682 |
| 124 | 124 | 0.417 |
| 125 | 125 | 0.147 |
| 126 | 126 | 0.268 |
| 127 | 127 | 0.118 |
| 128 | 128 | 0.108 |
| 129 | 129 | 0.294 |
| 13 | 13 | 0.0289 |
| 130 | 130 | 0.494 |
| 131 | 131 | 0.7 |
| 132 | 132 | 0.805 |
| 133 | 133 | 0.449 |
| 134 | 134 | 0.873 |
| 135 | 135 | 0.114 |
| 136 | 136 | 0.301 |
| 137 | 137 | 0.0285 |
| 138 | 138 | 0.387 |
| 139 | 139 | 0.139 |
| 14 | 14 | 0.327 |
| 140 | 140 | 0.74 |
| 141 | 141 | 0.557 |
| 142 | 142 | 0.65 |
| 143 | 143 | 0.295 |
| 144 | 144 | 0.602 |
| 145 | 145 | 0.511 |
| 146 | 146 | 0.927 |
| 147 | 147 | 0.429 |
| 148 | 148 | 0.0157 |
| 149 | 149 | 0.523 |
| 15 | 15 | 0.079 |
| 150 | 150 | 0.663 |
| 151 | 151 | 0.727 |
| 152 | 152 | 0.0764 |
| 153 | 153 | 0.9 |
| 154 | 154 | 0.959 |
| 155 | 155 | 0.574 |
| 156 | 156 | 0.595 |
| 157 | 157 | 0.745 |
| 158 | 158 | 0.433 |
| 159 | 159 | 0.261 |
| 16 | 16 | 0.144 |
| 160 | 160 | 0.464 |
| 161 | 161 | 0.644 |
| 162 | 162 | 0.39 |
| 163 | 163 | 0.808 |
| 164 | 164 | 0.257 |
| 165 | 165 | 0.326 |
| 166 | 166 | 0.884 |
| 167 | 167 | 0.614 |
| 168 | 168 | 0.486 |
| 169 | 169 | 0.00262 |
| 17 | 17 | 0.184 |
| 18 | 18 | 0.205 |
| 19 | 19 | 0.211 |
| 2 | 2 | 0.81 |
| 20 | 20 | 0.935 |
| 21 | 21 | 0.267 |
| 22 | 22 | 0.118 |
| 23 | 23 | 0.201 |
| 24 | 24 | 0.014 |
| 25 | 25 | 0.438 |
| 26 | 26 | 0.133 |
| 27 | 27 | 0.252 |
| 28 | 28 | 0.342 |
| 29 | 29 | 0.346 |
| 3 | 3 | 0.071 |
| 30 | 30 | 0.945 |
| 31 | 31 | 0.792 |
| 32 | 32 | 0.864 |
| 33 | 33 | 0.232 |
| 34 | 34 | 0.306 |
| 35 | 35 | 0.738 |
| 36 | 36 | 0.148 |
| 37 | 37 | 0.127 |
| 38 | 38 | 0.067 |
| 39 | 39 | 0.868 |
| 4 | 4 | 0.688 |
| 40 | 40 | 0.0598 |
| 41 | 41 | 0.0273 |
| 42 | 42 | 0.651 |
| 43 | 43 | 0.0804 |
| 44 | 44 | 0.0777 |
| 45 | 45 | 0.61 |
| 46 | 46 | 0.212 |
| 47 | 47 | 0.248 |
| 48 | 48 | 0.343 |
| 49 | 49 | 0.232 |
| 5 | 5 | 0.281 |
| 50 | 50 | 0.922 |
| 51 | 51 | 0.549 |
| 52 | 52 | 0.364 |
| 53 | 53 | 0.415 |
| 54 | 54 | 0.353 |
| 55 | 55 | 0.0817 |
| 56 | 56 | 0.564 |
| 57 | 57 | 0.757 |
| 58 | 58 | 0.0987 |
| 59 | 59 | 0.0753 |
| 6 | 6 | 0.381 |
| 60 | 60 | 0.117 |
| 61 | 61 | 0.369 |
| 62 | 62 | 0.0502 |
| 63 | 63 | 0.442 |
| 64 | 64 | 0.321 |
| 65 | 65 | 0.0605 |
| 66 | 66 | 0.958 |
| 67 | 67 | 0.301 |
| 68 | 68 | 0.162 |
| 69 | 69 | 0.67 |
| 7 | 7 | 0.136 |
| 70 | 70 | 0.0904 |
| 71 | 71 | 0.0349 |
| 72 | 72 | 0.241 |
| 73 | 73 | 0.0137 |
| 74 | 74 | 0.917 |
| 75 | 75 | 0.0827 |
| 76 | 76 | 0.42 |
| 77 | 77 | 0.248 |
| 78 | 78 | 0.0673 |
| 79 | 79 | 0.785 |
| 8 | 8 | 0.19 |
| 80 | 80 | 0.312 |
| 81 | 81 | 0.272 |
| 82 | 82 | 0.215 |
| 83 | 83 | 0.27 |
| 84 | 84 | 0.648 |
| 85 | 85 | 0.0394 |
| 86 | 86 | 0.116 |
| 87 | 87 | 0.0304 |
| 88 | 88 | 0.295 |
| 89 | 89 | 0.0552 |
| 9 | 9 | 0.269 |
| 90 | 90 | 0.04 |
| 91 | 91 | 0.861 |
| 92 | 92 | 0.18 |
| 93 | 93 | 0.617 |
| 94 | 94 | 0.12 |
| 95 | 95 | 0.0661 |
| 96 | 96 | 0.149 |
| 97 | 97 | 0.84 |
| 98 | 98 | 0.604 |
| 99 | 99 | 0.691 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs11899
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
EFO:0002091 biological replicate
FF:0000086 human macrophage sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000988 (hematopoietic cell)
0000548 (animal cell)
0000763 (myeloid cell)
0002371 (somatic cell)
0000766 (myeloid leukocyte)
0000219 (motile cell)
0000325 (stuff accumulating cell)
0000473 (defensive cell)
0000234 (phagocyte)
0000738 (leukocyte)
0000255 (eukaryotic cell)
0000235 (macrophage)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000086 (human macrophage sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000049 (common myeloid progenitor)
CL:0000134 (mesenchymal cell)
