FFCP PHASE1:Hg19::chrX:100663186..100663241,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3188 | |EntrezGene=3188 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5042 | |HGNC=5042 | ||
|TSSclassifier=strong | |||
|UniProt=B4DFK9 | |UniProt=B4DFK9 | ||
|association_with_transcript=0bp_to_ENST00000457902,uc004ehm.2,uc004ehn.2_5end | |association_with_transcript=0bp_to_ENST00000457902,uc004ehm.2,uc004ehn.2_5end | ||
|cluster_id=chrX:100663186..100663241,+ | |||
|coexpression_cluster_id=C509 | |coexpression_cluster_id=C509 | ||
|description=CAGE_peak_1_at_HNRNPH2_5end | |description=CAGE_peak_1_at_HNRNPH2_5end | ||
|id=chrX:100663186..100663241,+ | |id=chrX:100663186..100663241,+ | ||
|ontology_enrichment_celltype=CL:0000766!4.58e-24!76;CL:0000860!1.39e-23!45;CL:0002057!2.06e-23!42;CL:0000839!4.91e-21!70;CL:0000557!8.21e-20!71;CL:0002194!2.30e-19!63;CL:0000576!2.30e-19!63;CL:0000040!2.30e-19!63;CL:0000559!2.30e-19!63;CL:0002009!3.08e-19!65;CL:0000763!1.03e-14!112;CL:0000049!1.03e-14!112;CL:0000738!3.42e-10!140;CL:0002031!2.50e-08!124;CL:0002087!8.53e-07!119 | |ontology_enrichment_celltype=CL:0000766!4.58e-24!76;CL:0000860!1.39e-23!45;CL:0002057!2.06e-23!42;CL:0000839!4.91e-21!70;CL:0000557!8.21e-20!71;CL:0002194!2.30e-19!63;CL:0000576!2.30e-19!63;CL:0000040!2.30e-19!63;CL:0000559!2.30e-19!63;CL:0002009!3.08e-19!65;CL:0000763!1.03e-14!112;CL:0000049!1.03e-14!112;CL:0000738!3.42e-10!140;CL:0002031!2.50e-08!124;CL:0002087!8.53e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0000860;5.86e-20;33!CL:0002057;5.86e-20;33!CL:0000473;4.34e-16;39!CL:0000234;4.34e-16;39!CL:0000576;1.25e-14;48!CL:0000766;3.68e-11;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.40e-24,72;CL:0000860,2.06e-23,42;CL:0002057,2.06e-23,42;CL:0000473,8.37e-23,48;CL:0000234,8.37e-23,48;CL:0000839,1.63e-21,66;CL:0000557,3.14e-20,67;CL:0002194,7.21e-20,59;CL:0000576,7.21e-20,59;CL:0000040,7.21e-20,59;CL:0000559,7.21e-20,59;CL:0002009,1.04e-19,61;CL:0000763,9.49e-15,108;CL:0000049,9.49e-15,108;CL:0000738,4.04e-10,136;CL:0002031,2.95e-08,120 | |||
|ontology_enrichment_development_v019=CL:0002057;5.69e-17;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004765!5.67e-17!101;UBERON:0001434!5.67e-17!101;UBERON:0002390!6.91e-17!102;UBERON:0003061!6.91e-17!102;UBERON:0002371!7.25e-17!80;UBERON:0001474!9.02e-16!86;UBERON:0002193!2.08e-15!112;UBERON:0007023!3.22e-11!115;UBERON:0002405!2.03e-10!115;UBERON:0002204!4.55e-08!167;UBERON:0000062!5.56e-08!511;UBERON:0002780!1.96e-07!41;UBERON:0001890!1.96e-07!41;UBERON:0006240!1.96e-07!41;UBERON:0003080!4.55e-07!42 | |ontology_enrichment_uberon=UBERON:0004765!5.67e-17!101;UBERON:0001434!5.67e-17!101;UBERON:0002390!6.91e-17!102;UBERON:0003061!6.91e-17!102;UBERON:0002371!7.25e-17!80;UBERON:0001474!9.02e-16!86;UBERON:0002193!2.08e-15!112;UBERON:0007023!3.22e-11!115;UBERON:0002405!2.03e-10!115;UBERON:0002204!4.55e-08!167;UBERON:0000062!5.56e-08!511;UBERON:0002780!1.96e-07!41;UBERON:0001890!1.96e-07!41;UBERON:0006240!1.96e-07!41;UBERON:0003080!4.55e-07!42 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004765,1.13e-17,90;UBERON:0001434,1.64e-17,100;UBERON:0002371,4.24e-17,76;UBERON:0002390,5.36e-17,98;UBERON:0003061,5.36e-17,98;UBERON:0001474,6.20e-16,82;UBERON:0002193,1.87e-15,108;UBERON:0002405,5.07e-14,93;UBERON:0007023,5.58e-11,114;UBERON:0002204,1.81e-08,167;UBERON:0002780,1.96e-07,41;UBERON:0001890,1.96e-07,41;UBERON:0003080,1.96e-07,41;UBERON:0006240,1.96e-07,41;UBERON:0000073,7.16e-07,53;UBERON:0002616,7.16e-07,53 | |||
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| ||
|short_description=p1@HNRNPH2 | |short_description=p1@HNRNPH2 | ||
}} | }} |
Latest revision as of 18:06, 18 September 2015
Short description: | p1@HNRNPH2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_HNRNPH2_5end |
Coexpression cluster: | C509_Neutrophils_Eosinophils_CD14_Whole_CD34_CD19_Peripheral |
Association with transcript: | 0bp_to_ENST00000457902, uc004ehm.2, uc004ehn.2_5end |
EntrezGene: | HNRNPH2 |
HGNC: | 5042 |
UniProt: | B4DFK9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.40e-24 | 72 |
classical monocyte | 2.06e-23 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.06e-23 | 42 |
defensive cell | 8.37e-23 | 48 |
phagocyte | 8.37e-23 | 48 |
myeloid lineage restricted progenitor cell | 1.63e-21 | 66 |
granulocyte monocyte progenitor cell | 3.14e-20 | 67 |
monopoietic cell | 7.21e-20 | 59 |
monocyte | 7.21e-20 | 59 |
monoblast | 7.21e-20 | 59 |
promonocyte | 7.21e-20 | 59 |
macrophage dendritic cell progenitor | 1.04e-19 | 61 |
myeloid cell | 9.49e-15 | 108 |
common myeloid progenitor | 9.49e-15 | 108 |
leukocyte | 4.04e-10 | 136 |
hematopoietic lineage restricted progenitor cell | 2.95e-08 | 120 |
Ontology term | p-value | n |
---|---|---|
skeletal element | 1.13e-17 | 90 |
skeletal system | 1.64e-17 | 100 |
bone marrow | 4.24e-17 | 76 |
hematopoietic system | 5.36e-17 | 98 |
blood island | 5.36e-17 | 98 |
bone element | 6.20e-16 | 82 |
hemolymphoid system | 1.87e-15 | 108 |
immune system | 5.07e-14 | 93 |
adult organism | 5.58e-11 | 114 |
musculoskeletal system | 1.81e-08 | 167 |
regional part of forebrain | 1.96e-07 | 41 |
forebrain | 1.96e-07 | 41 |
anterior neural tube | 1.96e-07 | 41 |
future forebrain | 1.96e-07 | 41 |
regional part of nervous system | 7.16e-07 | 53 |
regional part of brain | 7.16e-07 | 53 |