FFCP PHASE1:Hg19::chr9:35689915..35689930,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7169 | |EntrezGene=7169 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12011 | |HGNC=12011 | ||
|TSSclassifier=strong | |||
|UniProt=P07951 | |UniProt=P07951 | ||
|association_with_transcript=0bp_to_ENST00000360958_5end | |association_with_transcript=0bp_to_ENST00000360958_5end | ||
|cluster_id=chr9:35689915..35689930,- | |||
|coexpression_cluster_id=C638 | |coexpression_cluster_id=C638 | ||
|description=CAGE_peak_1_at_TPM2_5end | |description=CAGE_peak_1_at_TPM2_5end | ||
|id=chr9:35689915..35689930,- | |id=chr9:35689915..35689930,- | ||
|ontology_enrichment_celltype=CL:0000055!7.49e-38!180;CL:0000680!1.25e-22!57;CL:0000056!1.25e-22!57;CL:0000355!1.25e-22!57;CL:0000183!5.90e-22!59;CL:0000187!1.20e-21!54;CL:0000393!1.88e-19!60;CL:0000211!1.88e-19!60;CL:0000192!5.89e-19!42;CL:0000514!5.89e-19!42;CL:0000057!1.16e-17!75;CL:0000222!1.89e-16!119;CL:0000359!9.87e-16!32;CL:0000220!1.67e-10!246;CL:0002321!1.75e-10!248;CL:0002620!2.45e-07!23 | |ontology_enrichment_celltype=CL:0000055!7.49e-38!180;CL:0000680!1.25e-22!57;CL:0000056!1.25e-22!57;CL:0000355!1.25e-22!57;CL:0000183!5.90e-22!59;CL:0000187!1.20e-21!54;CL:0000393!1.88e-19!60;CL:0000211!1.88e-19!60;CL:0000192!5.89e-19!42;CL:0000514!5.89e-19!42;CL:0000057!1.16e-17!75;CL:0000222!1.89e-16!119;CL:0000359!9.87e-16!32;CL:0000220!1.67e-10!246;CL:0002321!1.75e-10!248;CL:0002620!2.45e-07!23 | ||
|ontology_enrichment_celltype_v019=CL:0000359;6.84e-15;32!CL:0000192;6.15e-14;43!CL:0000187;2.39e-12;55!CL:0000393;2.77e-10;61!CL:0000211;2.77e-10;61!CL:0000057;5.06e-08;73!CL:0002620;3.35e-07;23!CL:0000134;8.11e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,4.26e-23,58;CL:0000056,4.26e-23,58;CL:0000355,4.26e-23,58;CL:0000187,4.23e-22,55;CL:0000393,6.80e-20,61;CL:0000211,6.80e-20,61;CL:0000192,2.32e-19,43;CL:0000514,2.32e-19,43;CL:0000057,2.26e-18,76;CL:0000222,6.84e-17,121;CL:0000359,6.85e-16,32;CL:0002321,1.44e-10,250;CL:0002620,3.35e-07,23 | |||
|ontology_enrichment_development_v019=CL:0000514;6.15e-14;43!CL:0000355;2.67e-12;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!5.05e-29!83;UBERON:0002329!5.05e-29!83;UBERON:0003077!5.05e-29!83;UBERON:0003059!5.05e-29!83;UBERON:0007282!5.05e-29!83;UBERON:0009618!5.05e-29!83;UBERON:0007285!5.05e-29!83;UBERON:0004290!3.09e-27!70;UBERON:0002385!4.77e-26!63;UBERON:0001015!4.77e-26!63;UBERON:0000383!4.77e-26!63;UBERON:0001134!2.57e-25!61;UBERON:0002036!2.57e-25!61;UBERON:0003082!2.57e-25!61;UBERON:0005256!3.42e-23!143;UBERON:0000486!6.14e-23!82;UBERON:0000481!3.27e-20!347;UBERON:0003104!1.05e-19!238;UBERON:0009142!1.05e-19!238;UBERON:0000475!8.03e-19!365;UBERON:0002100!1.45e-18!216;UBERON:0000468!9.70e-17!659;UBERON:0004872!4.46e-16!84;UBERON:0002049!2.77e-14!79;UBERON:0007798!2.77e-14!79;UBERON:0001981!3.12e-14!60;UBERON:0007500!3.12e-14!60;UBERON:0004537!3.12e-14!60;UBERON:0006965!3.12e-14!60;UBERON:0001637!3.28e-14!42;UBERON:0003509!3.28e-14!42;UBERON:0004572!3.28e-14!42;UBERON:0000490!7.86e-14!138;UBERON:0003914!2.94e-12!118;UBERON:0000467!6.49e-12!625;UBERON:0000055!8.20e-12!69;UBERON:0004573!1.24e-11!33;UBERON:0004571!1.24e-11!33;UBERON:0000480!1.25e-11!626;UBERON:0001009!4.15e-11!113;UBERON:0000926!4.88e-11!448;UBERON:0004120!4.88e-11!448;UBERON:0006603!4.88e-11!448;UBERON:0004535!9.42e-11!110;UBERON:0003102!1.71e-10!95;UBERON:0000119!4.64e-10!312;UBERON:0000922!4.79e-10!612;UBERON:0000483!1.01e-09!309;UBERON:0002050!1.59e-09!605;UBERON:0005423!1.59e-09!605;UBERON:0000923!2.52e-09!604;UBERON:0005291!2.52e-09!604;UBERON:0006598!2.52e-09!604;UBERON:0002532!2.52e-09!604;UBERON:0000477!3.89e-08!286;UBERON:0007100!2.47e-07!27;UBERON:0001135!2.70e-07!15;UBERON:0000948!4.36e-07!24;UBERON:0005498!4.36e-07!24;UBERON:0004140!4.36e-07!24;UBERON:0009881!4.36e-07!24;UBERON:0004141!4.36e-07!24;UBERON:0003084!4.36e-07!24;UBERON:0007005!4.36e-07!24;UBERON:0004139!4.36e-07!24;UBERON:0004291!4.36e-07!24 | |ontology_enrichment_uberon=UBERON:0000914!5.05e-29!83;UBERON:0002329!5.05e-29!83;UBERON:0003077!5.05e-29!83;UBERON:0003059!5.05e-29!83;UBERON:0007282!5.05e-29!83;UBERON:0009618!5.05e-29!83;UBERON:0007285!5.05e-29!83;UBERON:0004290!3.09e-27!70;UBERON:0002385!4.77e-26!63;UBERON:0001015!4.77e-26!63;UBERON:0000383!4.77e-26!63;UBERON:0001134!2.57e-25!61;UBERON:0002036!2.57e-25!61;UBERON:0003082!2.57e-25!61;UBERON:0005256!3.42e-23!143;UBERON:0000486!6.14e-23!82;UBERON:0000481!3.27e-20!347;UBERON:0003104!1.05e-19!238;UBERON:0009142!1.05e-19!238;UBERON:0000475!8.03e-19!365;UBERON:0002100!1.45e-18!216;UBERON:0000468!9.70e-17!659;UBERON:0004872!4.46e-16!84;UBERON:0002049!2.77e-14!79;UBERON:0007798!2.77e-14!79;UBERON:0001981!3.12e-14!60;UBERON:0007500!3.12e-14!60;UBERON:0004537!3.12e-14!60;UBERON:0006965!3.12e-14!60;UBERON:0001637!3.28e-14!42;UBERON:0003509!3.28e-14!42;UBERON:0004572!3.28e-14!42;UBERON:0000490!7.86e-14!138;UBERON:0003914!2.94e-12!118;UBERON:0000467!6.49e-12!625;UBERON:0000055!8.20e-12!69;UBERON:0004573!1.24e-11!33;UBERON:0004571!1.24e-11!33;UBERON:0000480!1.25e-11!626;UBERON:0001009!4.15e-11!113;UBERON:0000926!4.88e-11!448;UBERON:0004120!4.88e-11!448;UBERON:0006603!4.88e-11!448;UBERON:0004535!9.42e-11!110;UBERON:0003102!1.71e-10!95;UBERON:0000119!4.64e-10!312;UBERON:0000922!4.79e-10!612;UBERON:0000483!1.01e-09!309;UBERON:0002050!1.59e-09!605;UBERON:0005423!1.59e-09!605;UBERON:0000923!2.52e-09!604;UBERON:0005291!2.52e-09!604;UBERON:0006598!2.52e-09!604;UBERON:0002532!2.52e-09!604;UBERON:0000477!3.89e-08!286;UBERON:0007100!2.47e-07!27;UBERON:0001135!2.70e-07!15;UBERON:0000948!4.36e-07!24;UBERON:0005498!4.36e-07!24;UBERON:0004140!4.36e-07!24;UBERON:0009881!4.36e-07!24;UBERON:0004141!4.36e-07!24;UBERON:0003084!4.36e-07!24;UBERON:0007005!4.36e-07!24;UBERON:0004139!4.36e-07!24;UBERON:0004291!4.36e-07!24 | ||
|ontology_enrichment_uberon_v019=UBERON:0002385;1.53e-12;31!UBERON:0001015;1.53e-12;31!UBERON:0000383;1.53e-12;31!UBERON:0004573;1.86e-10;33!UBERON:0004571;1.86e-10;33!UBERON:0001637;5.08e-10;42!UBERON:0003509;5.08e-10;42!UBERON:0004572;5.08e-10;42!UBERON:0002204;1.69e-07;70!UBERON:0001135;2.31e-07;15!UBERON:0007500;2.97e-07;56!UBERON:0001981;2.97e-07;56!UBERON:0004537;2.97e-07;56!UBERON:0001134;5.88e-07;16!UBERON:0002036;5.88e-07;16!UBERON:0007100;8.07e-07;25 | |||
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| ||
|short_description=p1@TPM2 | |short_description=p1@TPM2 | ||
}} | }} |
Latest revision as of 08:26, 17 September 2015
Short description: | p1@TPM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TPM2_5end |
Coexpression cluster: | C638_skeletal_tongue_Adipocyte_diaphragm_penis_throat_Smooth |
Association with transcript: | 0bp_to_ENST00000360958_5end |
EntrezGene: | TPM2 |
HGNC: | 12011 |
UniProt: | P07951 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 4.26e-23 | 58 |
myoblast | 4.26e-23 | 58 |
multi-potent skeletal muscle stem cell | 4.26e-23 | 58 |
muscle cell | 4.23e-22 | 55 |
electrically responsive cell | 6.80e-20 | 61 |
electrically active cell | 6.80e-20 | 61 |
smooth muscle cell | 2.32e-19 | 43 |
smooth muscle myoblast | 2.32e-19 | 43 |
fibroblast | 2.26e-18 | 76 |
mesodermal cell | 6.84e-17 | 121 |
vascular associated smooth muscle cell | 6.85e-16 | 32 |
embryonic cell | 1.44e-10 | 250 |
skin fibroblast | 3.35e-07 | 23 |