FFCP PHASE1:Hg19::chr9:138853016..138853090,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10422 | |EntrezGene=10422 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30221 | |HGNC=30221 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000478485_5end | |association_with_transcript=0bp_to_ENST00000478485_5end | ||
|cluster_id=chr9:138853016..138853090,- | |||
|coexpression_cluster_id=C122 | |coexpression_cluster_id=C122 | ||
|description=CAGE_peak_2_at_UBAC1_5end | |description=CAGE_peak_2_at_UBAC1_5end | ||
|id=chr9:138853016..138853090,- | |id=chr9:138853016..138853090,- | ||
|ontology_enrichment_celltype=CL:0000763!1.38e-11!112;CL:0000049!1.38e-11!112;CL:0002009!1.44e-07!65;CL:0000557!6.13e-07!71;CL:0002251!6.38e-07!21;CL:0000839!6.69e-07!70;CL:0002076!8.17e-07!43;CL:0002194!8.50e-07!63;CL:0000576!8.50e-07!63;CL:0000040!8.50e-07!63;CL:0000559!8.50e-07!63 | |ontology_enrichment_celltype=CL:0000763!1.38e-11!112;CL:0000049!1.38e-11!112;CL:0002009!1.44e-07!65;CL:0000557!6.13e-07!71;CL:0002251!6.38e-07!21;CL:0000839!6.69e-07!70;CL:0002076!8.17e-07!43;CL:0002194!8.50e-07!63;CL:0000576!8.50e-07!63;CL:0000040!8.50e-07!63;CL:0000559!8.50e-07!63 | ||
|ontology_enrichment_celltype_v019=CL:0002251;1.35e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,1.35e-10,108;CL:0000049,1.35e-10,108;CL:0002251,1.39e-07,20;CL:0002076,3.32e-07,42 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!9.96e-07!106 | |ontology_enrichment_disease=DOID:305!9.96e-07!106 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,9.96e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0000062!4.09e-12!511;UBERON:0004119!5.81e-08!169;UBERON:0000925!5.81e-08!169;UBERON:0006595!5.81e-08!169;UBERON:0001007!1.82e-07!155;UBERON:0001555!1.82e-07!155;UBERON:0007026!1.82e-07!155;UBERON:0001004!1.92e-07!72;UBERON:0002371!3.83e-07!80 | |ontology_enrichment_uberon=UBERON:0000062!4.09e-12!511;UBERON:0004119!5.81e-08!169;UBERON:0000925!5.81e-08!169;UBERON:0006595!5.81e-08!169;UBERON:0001007!1.82e-07!155;UBERON:0001555!1.82e-07!155;UBERON:0007026!1.82e-07!155;UBERON:0001004!1.92e-07!72;UBERON:0002371!3.83e-07!80 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.81e-07,160;UBERON:0000925,1.81e-07,160;UBERON:0006595,1.81e-07,160;UBERON:0001007,4.15e-07,145;UBERON:0001555,4.15e-07,145;UBERON:0007026,4.15e-07,145;UBERON:0001004,6.84e-07,74 | |||
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| ||
|short_description=p2@UBAC1 | |short_description=p2@UBAC1 | ||
}} | }} |
Latest revision as of 11:10, 16 September 2015
Short description: | p2@UBAC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_UBAC1_5end |
Coexpression cluster: | C122_chronic_Reticulocytes_skeletal_leukemia_acute_colon_Tracheal |
Association with transcript: | 0bp_to_ENST00000478485_5end |
EntrezGene: | UBAC1 |
HGNC: | 30221 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 1.35e-10 | 108 |
common myeloid progenitor | 1.35e-10 | 108 |
epithelial cell of alimentary canal | 1.39e-07 | 20 |
endo-epithelial cell | 3.32e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 1.81e-07 | 160 |
endoderm | 1.81e-07 | 160 |
presumptive endoderm | 1.81e-07 | 160 |
digestive system | 4.15e-07 | 145 |
digestive tract | 4.15e-07 | 145 |
primitive gut | 4.15e-07 | 145 |
respiratory system | 6.84e-07 | 74 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 9.96e-07 | 106 |