FFCP PHASE1:Hg19::chr9:130914494..130914509,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:130914494..130914509,+ | |||
|coexpression_cluster_id=C484 | |coexpression_cluster_id=C484 | ||
|description=CAGE_peak_at_chr9:130914494..130914509,+ | |description=CAGE_peak_at_chr9:130914494..130914509,+ | ||
|id=chr9:130914494..130914509,+ | |id=chr9:130914494..130914509,+ | ||
|ontology_enrichment_celltype=CL:0002178!2.30e-14!3;CL:0000066!1.15e-12!254;CL:0002076!1.28e-12!43;CL:0000223!3.82e-10!59;CL:1000415!7.19e-10!2;CL:0002251!3.78e-07!21 | |ontology_enrichment_celltype=CL:0002178!2.30e-14!3;CL:0000066!1.15e-12!254;CL:0002076!1.28e-12!43;CL:0000223!3.82e-10!59;CL:1000415!7.19e-10!2;CL:0002251!3.78e-07!21 | ||
|ontology_enrichment_celltype_v019=CL:0002231;7.42e-11;3!CL:0002178;1.04e-10;3!CL:0002076;1.39e-09;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,2.75e-11,42;CL:0002231,7.42e-11,3;CL:0002178,9.90e-11,3;CL:0000223,2.67e-08,58 | |||
|ontology_enrichment_development_v019=UBERON:0008814;2.21e-15;2!UBERON:0010056;2.21e-15;2 | |||
|ontology_enrichment_disease=DOID:305!2.52e-22!106;DOID:299!3.97e-16!25;DOID:0050687!5.76e-15!143;DOID:1749!8.82e-11!14;DOID:3493!5.75e-10!2;DOID:4929!6.58e-10!2;DOID:162!8.95e-07!235 | |ontology_enrichment_disease=DOID:305!2.52e-22!106;DOID:299!3.97e-16!25;DOID:0050687!5.76e-15!143;DOID:1749!8.82e-11!14;DOID:3493!5.75e-10!2;DOID:4929!6.58e-10!2;DOID:162!8.95e-07!235 | ||
|ontology_enrichment_disease_v019=DOID:3493;2.21e-15;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,2.05e-15,2;DOID:305,5.42e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0002294!8.62e-16!7;UBERON:0001173!8.62e-16!7;UBERON:0004912!8.62e-16!7;UBERON:0004119!9.36e-13!169;UBERON:0000925!9.36e-13!169;UBERON:0006595!9.36e-13!169;UBERON:0000077!2.58e-11!130;UBERON:0001007!9.13e-11!155;UBERON:0001555!9.13e-11!155;UBERON:0007026!9.13e-11!155;UBERON:0002394!1.13e-10!4;UBERON:0003928!1.13e-10!4;UBERON:0004921!3.68e-10!129;UBERON:0004185!3.68e-10!129;UBERON:0001041!3.96e-09!98;UBERON:0000065!7.52e-08!53;UBERON:0005911!1.64e-07!82;UBERON:0000466!3.29e-07!126;UBERON:0001723!7.17e-07!3;UBERON:0001033!7.17e-07!3;UBERON:0010056!7.17e-07!3;UBERON:0002110!7.60e-07!3;UBERON:0006242!7.60e-07!3 | |ontology_enrichment_uberon=UBERON:0002294!8.62e-16!7;UBERON:0001173!8.62e-16!7;UBERON:0004912!8.62e-16!7;UBERON:0004119!9.36e-13!169;UBERON:0000925!9.36e-13!169;UBERON:0006595!9.36e-13!169;UBERON:0000077!2.58e-11!130;UBERON:0001007!9.13e-11!155;UBERON:0001555!9.13e-11!155;UBERON:0007026!9.13e-11!155;UBERON:0002394!1.13e-10!4;UBERON:0003928!1.13e-10!4;UBERON:0004921!3.68e-10!129;UBERON:0004185!3.68e-10!129;UBERON:0001041!3.96e-09!98;UBERON:0000065!7.52e-08!53;UBERON:0005911!1.64e-07!82;UBERON:0000466!3.29e-07!126;UBERON:0001723!7.17e-07!3;UBERON:0001033!7.17e-07!3;UBERON:0010056!7.17e-07!3;UBERON:0002110!7.60e-07!3;UBERON:0006242!7.60e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0006562;1.54e-15;2!UBERON:0001723;1.04e-10;3!UBERON:0001033;1.04e-10;3!UBERON:0002394;2.35e-08;4!UBERON:0003928;2.35e-08;4!UBERON:0000945;6.21e-07;5!UBERON:0010039;6.21e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006562,2.98e-11,11;UBERON:0001723,1.20e-10,3;UBERON:0001033,1.20e-10,3;UBERON:0010056,1.20e-10,3 | |||
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| ||
|short_description=p@chr9:130914494..130914509,+ | |short_description=p@chr9:130914494..130914509,+ | ||
}} | }} |
Latest revision as of 23:08, 31 July 2015
Short description: | p@chr9:130914494..130914509, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:130914494..130914509, + |
Coexpression cluster: | C484_squamous_pharyngeal_bile_transitionalcell_Prostate_signet_trachea |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 2.75e-11 | 42 |
epithelial cell of prostate | 7.42e-11 | 3 |
epithelial cell of stomach | 9.90e-11 | 3 |
endodermal cell | 2.67e-08 | 58 |
Ontology term | p-value | n |
---|---|---|
pharynx | 2.98e-11 | 11 |
tongue | 1.20e-10 | 3 |
gustatory system | 1.20e-10 | 3 |
future tongue | 1.20e-10 | 3 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 2.05e-15 | 2 |
carcinoma | 5.42e-07 | 106 |