FFCP PHASE1:Hg19::chr9:130540962..130540988,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10044 | |EntrezGene=10044 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16884 | |HGNC=16884 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000468969,ENST00000473535,uc004bsd.1_5end | |association_with_transcript=0bp_to_ENST00000468969,ENST00000473535,uc004bsd.1_5end | ||
|cluster_id=chr9:130540962..130540988,- | |||
|coexpression_cluster_id=C2203 | |coexpression_cluster_id=C2203 | ||
|description=CAGE_peak_4_at_SH2D3C_5end | |description=CAGE_peak_4_at_SH2D3C_5end | ||
|id=chr9:130540962..130540988,- | |id=chr9:130540962..130540988,- | ||
|ontology_enrichment_celltype=CL:0000037!1.69e-76!172;CL:0000566!1.69e-76!172;CL:0002032!5.83e-72!165;CL:0000837!5.83e-72!165;CL:0000988!3.91e-71!182;CL:0000738!7.83e-65!140;CL:0002087!9.73e-56!119;CL:0002031!6.65e-53!124;CL:0000763!1.80e-42!112;CL:0000049!1.80e-42!112;CL:0000766!2.54e-35!76;CL:0002057!3.84e-29!42;CL:0000839!2.76e-28!70;CL:0000557!4.15e-28!71;CL:0002194!1.17e-26!63;CL:0000576!1.17e-26!63;CL:0000040!1.17e-26!63;CL:0000559!1.17e-26!63;CL:0000860!5.78e-26!45;CL:0000542!2.94e-25!53;CL:0000051!2.94e-25!53;CL:0002009!3.57e-25!65;CL:0000838!1.91e-24!52;CL:0000945!7.90e-19!24;CL:0000826!7.90e-19!24;CL:0000134!2.54e-13!358;CL:0002320!1.30e-12!365;CL:0000236!1.33e-12!14;CL:0002393!1.10e-08!9;CL:0002397!1.10e-08!9;CL:0000219!1.25e-08!390;CL:0000094!3.19e-08!8;CL:0000791!1.16e-07!18;CL:0000789!1.16e-07!18;CL:0002420!1.16e-07!18;CL:0002419!1.16e-07!18;CL:0000790!1.16e-07!18;CL:0000084!2.53e-07!25;CL:0000827!2.53e-07!25;CL:0000625!9.83e-07!11 | |ontology_enrichment_celltype=CL:0000037!1.69e-76!172;CL:0000566!1.69e-76!172;CL:0002032!5.83e-72!165;CL:0000837!5.83e-72!165;CL:0000988!3.91e-71!182;CL:0000738!7.83e-65!140;CL:0002087!9.73e-56!119;CL:0002031!6.65e-53!124;CL:0000763!1.80e-42!112;CL:0000049!1.80e-42!112;CL:0000766!2.54e-35!76;CL:0002057!3.84e-29!42;CL:0000839!2.76e-28!70;CL:0000557!4.15e-28!71;CL:0002194!1.17e-26!63;CL:0000576!1.17e-26!63;CL:0000040!1.17e-26!63;CL:0000559!1.17e-26!63;CL:0000860!5.78e-26!45;CL:0000542!2.94e-25!53;CL:0000051!2.94e-25!53;CL:0002009!3.57e-25!65;CL:0000838!1.91e-24!52;CL:0000945!7.90e-19!24;CL:0000826!7.90e-19!24;CL:0000134!2.54e-13!358;CL:0002320!1.30e-12!365;CL:0000236!1.33e-12!14;CL:0002393!1.10e-08!9;CL:0002397!1.10e-08!9;CL:0000219!1.25e-08!390;CL:0000094!3.19e-08!8;CL:0000791!1.16e-07!18;CL:0000789!1.16e-07!18;CL:0002420!1.16e-07!18;CL:0002419!1.16e-07!18;CL:0000790!1.16e-07!18;CL:0000084!2.53e-07!25;CL:0000827!2.53e-07!25;CL:0000625!9.83e-07!11 | ||
|ontology_enrichment_celltype_v019=CL:0000945;6.66e-26;24!CL:0000860;6.11e-25;33!CL:0002057;6.11e-25;33!CL:0000576;3.97e-22;48!CL:0000473;6.02e-20;39!CL:0000234;6.02e-20;39!CL:0000766;1.28e-17;69!CL:0002087;2.31e-17;104!CL:0000738;3.26e-16;136!CL:0000236;4.41e-16;13!CL:0000763;1.35e-14;100!CL:0000542;2.02e-13;53!CL:0000988;3.09e-12;177!CL:0000094;6.64e-11;8!CL:0002393;7.67e-08;6!CL:0002397;7.67e-08;6!CL:0000081;2.39e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,9.55e-83,168;CL:0000988,1.37e-76,177;CL:0002032,1.48e-76,161;CL:0000837,1.48e-76,161;CL:0000738,8.35e-71,136;CL:0002087,1.58e-62,115;CL:0002031,8.05e-55,120;CL:0000763,2.43e-49,108;CL:0000049,2.43e-49,108;CL:0000766,2.20e-43,72;CL:0000860,1.69e-37,42;CL:0002057,1.69e-37,42;CL:0002194,2.51e-35,59;CL:0000576,2.51e-35,59;CL:0000040,2.51e-35,59;CL:0000559,2.51e-35,59;CL:0000473,2.83e-34,48;CL:0000234,2.83e-34,48;CL:0000557,5.85e-34,67;CL:0002009,1.23e-33,61;CL:0000839,7.69e-33,66;CL:0000945,5.87e-26,24;CL:0000826,5.87e-26,24;CL:0000542,1.02e-22,53;CL:0000051,1.02e-22,53;CL:0000838,1.04e-21,52;CL:0000134,1.66e-20,354;CL:0002320,1.92e-19,361;CL:0000236,3.78e-17,14;CL:0000219,9.55e-16,386;CL:0002393,1.28e-11,9;CL:0002397,1.28e-11,9;CL:0000034,2.16e-11,441;CL:0000048,2.24e-11,427;CL:0000094,5.72e-11,8;CL:0000723,8.60e-11,433;CL:0000081,2.16e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;1.14e-26;42!CL:0000049;1.51e-14;108!CL:0000051;2.02e-13;53 | |||
|ontology_enrichment_disease=DOID:2531!1.14e-13!51;DOID:0060083!1.14e-13!51;DOID:1240!6.04e-12!39;DOID:8692!4.22e-10!31 | |ontology_enrichment_disease=DOID:2531!1.14e-13!51;DOID:0060083!1.14e-13!51;DOID:1240!6.04e-12!39;DOID:8692!4.22e-10!31 | ||
|ontology_enrichment_disease_v019=DOID:8692;1.56e-10;31!DOID:1240;2.33e-10;39!DOID:2531;1.30e-09;51!DOID:0060083;1.30e-09;51 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,1.38e-15,51;DOID:0060083,1.38e-15,51;DOID:1240,3.21e-13,39;DOID:8692,3.70e-11,31 | |||
|ontology_enrichment_uberon=UBERON:0002390!5.85e-36!102;UBERON:0003061!5.85e-36!102;UBERON:0002193!2.89e-32!112;UBERON:0002371!6.85e-25!80;UBERON:0001474!5.95e-23!86;UBERON:0002405!5.83e-20!115;UBERON:0004765!8.79e-17!101;UBERON:0001434!8.79e-17!101;UBERON:0007023!7.35e-12!115;UBERON:0002384!1.96e-11!375;UBERON:0000178!3.21e-08!15;UBERON:0000179!3.21e-08!15;UBERON:0000463!3.21e-08!15;UBERON:0003081!7.44e-07!216 | |ontology_enrichment_uberon=UBERON:0002390!5.85e-36!102;UBERON:0003061!5.85e-36!102;UBERON:0002193!2.89e-32!112;UBERON:0002371!6.85e-25!80;UBERON:0001474!5.95e-23!86;UBERON:0002405!5.83e-20!115;UBERON:0004765!8.79e-17!101;UBERON:0001434!8.79e-17!101;UBERON:0007023!7.35e-12!115;UBERON:0002384!1.96e-11!375;UBERON:0000178!3.21e-08!15;UBERON:0000179!3.21e-08!15;UBERON:0000463!3.21e-08!15;UBERON:0003081!7.44e-07!216 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.19e-11;15!UBERON:0000179;1.19e-11;15!UBERON:0000463;1.19e-11;15!UBERON:0002390;6.58e-11;32!UBERON:0002193;7.08e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.79e-46,98;UBERON:0003061,4.79e-46,98;UBERON:0002193,1.53e-42,108;UBERON:0002405,4.76e-32,93;UBERON:0002371,4.43e-31,76;UBERON:0001474,1.60e-27,82;UBERON:0004765,1.51e-23,90;UBERON:0001434,1.61e-19,100;UBERON:0002384,5.31e-18,371;UBERON:0003081,4.05e-13,203;UBERON:0000178,1.11e-11,15;UBERON:0000179,1.11e-11,15;UBERON:0000463,1.11e-11,15;UBERON:0002204,9.05e-07,167 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.36218985290986,2.95562122019805,4.5652253161934,7.47392126012918,2.68680578668049,2.63187409637329,0,0,0,6.27484324700443,1.70603078984906,6.16560922603179,4.9859586767869,3.81034450193269,3.90619567288533,0.223915474239924,0.647787332037959,0.257575567634187,7.99690313287606,5.29026321164333,7.03493777444667,7.20530014407622,3.28934310417461,3.40677007984614,2.3015391385772,1.2808035326455,2.36482229888585,3.44745680736619,8.39130088658974,10.8341189275473,8.094420600332,2.18324920046277,4.71919317334678,4.59125838556354,3.20929027076094,4.47535988059329,4.94776950280074,2.79249120670285,6.39337125799041,2.61188314765726,1.70215567407342,1.86846674698672,3.01498398308092,5.21482918420201,1.95469960234605,0.605399502633369,0.368277635987565,1.26584954976354,11.6190407471568,9.35458919846192,9.85395633889367,14.1534075244584,13.3657434628941,11.4115166554927,12.5405607246149,10.5425838915518,10.5945209183488,17.5996244461323,16.9302969491261,9.7846017924991,12.8019066769952,15.2150475073685,9.19603903927173,10.5767179645578,10.494591299889,6.26134266020393,3.52342313622563,4.20500550937752,3.96513985737078,1.12101712596307,5.79444986505169,0,0.393010762749165,0.411202997999018,2.17342444007882,0.977766799900771,2.36723902867367,1.94826728407911,5.01347055983281,1.47302953737419,2.43687284041983,2.16643091012012,3.45846563259323,2.60118695119756,7.07082989795807,2.76350017785848,6.37566788617116,1.77943875794473,1.87278579662799,0,5.09892042139048,0.383220493601921,1.71813722741315,2.53019692019503,2.22995790026868,3.25541726928209,0.950452044448374,4.21610333417764,2.8157054453972,6.24653632761729,4.2619905367923,1.64225599384209,1.00803371612366,0.534880391567015,0.434473211648397,0,0.670700859703636,0,0,0,0,0,0,0.0945348171640679,0,0,0.523916301990851,0,0,3.57002133020152,2.96020553408754,1.59549552622638,14.5479280826259,9.15191857248205,13.0010125465348,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,36.8985168820977,31.022421131866,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492434012174795,1.63802985597466,1.78357394746474,0,0,0,0,0,0,0.492663237895943,4.4024217006613,1.4512968087854,0.720599767084807,0.88369703398466,0,0,0,0,0,0,0,0.224262168690721,0,0.1466765716419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34502172792233,0.788123040807709,0.646882724578552,1.79680250791648,0,0,0,0,0,40.4463792931478,44.8742188806037,31.0811635077027,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587403472388222,0,2.89475236572042,6.90285442619574,4.16237475433433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13733384070897,0.170093705276516,0,0,0,0,0,0,0,0.438519753291869,0,0,0,0,0.515205058238611,0,0.082509499920588,0,0,0,0.096670718292122,0,0,0,0,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,17.7606663231259,19.8805673857018,26.7734177971856,16.4379925065874,22.2135627466545,27.8843523812868,23.2213518012389,20.621254583651,0,0,0,9.84756828166309,6.78065300989291,0.426851060090485,0,2.79411120005943,16.4694618313835,7.62024897805978,0,4.21195767170188,19.1717130387881,0.156679895773023,2.50634477090067,8.80317244568337,1.4452926759333,3.8341944366299,3.40676990152261,2.06103206853459,2.45792611446766,2.01308497103174,1.83534055883099,1.75849285861836,0,0,4.32729085561573,2.33150377598474,2.81974010175699,0,0.146508179271894,0,2.34031106982705,0,0,0,0,0,0.844016498463076,0,0,0,0,4.69682656402951,0,0,3.32328974744888,0,0,0,6.65044081294933,0.197286811273867,2.3948309234694,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.331737779793674,0,0,0,0,0.384751292518985,0,0,0,0,0,0,0,4.08773192782946,7.53505230696119,1.66211681900156,0,0,0.167821586975843,0,0.476809736941136,0,0,0.141353071433941,0,0,0.353830258013357,1.22206028986725,0,0,0,1.61762719153625,2.40773294189637,0.468528891450678,2.18945747058799,0,0,0,0,0.30607276163049,1.32691817219825,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.678923115418936,0,0.677942222341597,0,0,0.316553979779393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,11.4971929260275,0,0,0.837847203816763,0.916641696046735,0,0.199679000498991,0.858452096273142,0.446342914883745,0.604651252380536,0,1.16495949527454,0,0,0,0,1.69346664131569,0,0.544813624446302,0,0,0,0,0,0.607495566580247,0,0,0.681909645754975,0,0,0,0,1.32418394073086,0,0,0,0,0,0.410462603746695,0,0,0.293104467356165,1.32506888912221,0.387848869084652,0.13223260174269,0,0,0.961086713109252,0.943225830597996,1.65695622138878,2.97699613087171,2.37133958277533,5.35887432875942,0,0,0,0.306345576763462,0,0,0.886068179966986,0,0.3755727921195,0,1.22021956690538,0.558867626472451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|short_description=p4@SH2D3C | |short_description=p4@SH2D3C | ||
}} | }} |
Latest revision as of 05:15, 25 September 2015
Short description: | p4@SH2D3C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SH2D3C_5end |
Coexpression cluster: | C2203_non_Neutrophils_Eosinophils_lymphoma_CD19_Whole_Burkitt |
Association with transcript: | 0bp_to_ENST00000468969, ENST00000473535, uc004bsd.1_5end |
EntrezGene: | SH2D3C |
HGNC: | 16884 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.79e-46 | 98 |
blood island | 4.79e-46 | 98 |
hemolymphoid system | 1.53e-42 | 108 |
immune system | 4.76e-32 | 93 |
bone marrow | 4.43e-31 | 76 |
bone element | 1.60e-27 | 82 |
skeletal element | 1.51e-23 | 90 |
skeletal system | 1.61e-19 | 100 |
connective tissue | 5.31e-18 | 371 |
lateral plate mesoderm | 4.05e-13 | 203 |
blood | 1.11e-11 | 15 |
haemolymphatic fluid | 1.11e-11 | 15 |
organism substance | 1.11e-11 | 15 |
musculoskeletal system | 9.05e-07 | 167 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 1.38e-15 | 51 |
immune system cancer | 1.38e-15 | 51 |
leukemia | 3.21e-13 | 39 |
myeloid leukemia | 3.70e-11 | 31 |