FFCP PHASE1:Hg19::chr19:48283739..48283754,+: Difference between revisions
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|id=chr19:48283739..48283754,+
|short_description=p@chr19:48283739..48283754,+
|description=CAGE_peak_at_chr19:48283739..48283754,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr19:48283739..48283754,+ | |||
|coexpression_cluster_id=C480 | |||
|description=CAGE_peak_at_chr19:48283739..48283754,+ | |||
|id=chr19:48283739..48283754,+ | |||
|ontology_enrichment_celltype=CL:0002575!3.17e-09!2;CL:0000188!1.21e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0002575;5.56e-26;2!CL:0000188;5.43e-23;9!CL:0000669;1.00e-13;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002575,5.56e-26,2;CL:0000188,5.13e-23,9;CL:0000669,1.00e-13,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000955!5.89e-10!69;UBERON:0006238!5.89e-10!69;UBERON:0005743!1.96e-08!86;UBERON:0007023!2.55e-08!115;UBERON:0001049!3.25e-08!57;UBERON:0005068!3.25e-08!57;UBERON:0006241!3.25e-08!57;UBERON:0007135!3.25e-08!57;UBERON:0001017!7.09e-08!82;UBERON:0002616!7.50e-08!59;UBERON:0004733!1.43e-07!12;UBERON:0002028!1.43e-07!12;UBERON:0007277!1.43e-07!12;UBERON:0000073!2.60e-07!94;UBERON:0001016!2.60e-07!94;UBERON:0004732!5.74e-07!13;UBERON:0002346!5.76e-07!90;UBERON:0000153!6.44e-07!129;UBERON:0007811!6.44e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0001134;1.49e-28;16!UBERON:0002036;1.49e-28;16!UBERON:0002385;6.50e-15;31!UBERON:0001015;6.50e-15;31!UBERON:0000383;6.50e-15;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,4.50e-08,62;UBERON:0002036,4.50e-08,62;UBERON:0003082,4.50e-08,62;UBERON:0002385,7.57e-08,64;UBERON:0001015,7.57e-08,64;UBERON:0000383,7.57e-08,64;UBERON:0002329,3.74e-07,71;UBERON:0003059,3.74e-07,71;UBERON:0007282,3.74e-07,71;UBERON:0004290,3.74e-07,71;UBERON:0009618,3.74e-07,71;UBERON:0003077,4.59e-07,72;UBERON:0007285,4.59e-07,72;UBERON:0007524,5.59e-07,73 | |||
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| ||
|short_description=p@chr19:48283739..48283754,+ | |||
}} | }} |
Latest revision as of 15:36, 27 July 2015
Short description: | p@chr19:48283739..48283754, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:48283739..48283754, + |
Coexpression cluster: | C480_Pericytes_Skeletal_skeletal_mesenchymal_Hepatic_diaphragm_tongue |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system pericyte | 5.56e-26 | 2 |
cell of skeletal muscle | 5.13e-23 | 9 |
pericyte cell | 1.00e-13 | 4 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 4.50e-08 | 62 |
striated muscle tissue | 4.50e-08 | 62 |
myotome | 4.50e-08 | 62 |
muscle tissue | 7.57e-08 | 64 |
musculature | 7.57e-08 | 64 |
musculature of body | 7.57e-08 | 64 |
somite | 3.74e-07 | 71 |
presomitic mesoderm | 3.74e-07 | 71 |
presumptive segmental plate | 3.74e-07 | 71 |
dermomyotome | 3.74e-07 | 71 |
trunk paraxial mesoderm | 3.74e-07 | 71 |
paraxial mesoderm | 4.59e-07 | 72 |
presumptive paraxial mesoderm | 4.59e-07 | 72 |
dense mesenchyme tissue | 5.59e-07 | 73 |