FFCP PHASE1:Hg19::chr9:100864441..100864454,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:100864441..100864454,+ | |||
|coexpression_cluster_id=C4032 | |coexpression_cluster_id=C4032 | ||
|description=CAGE_peak_at_chr9:100864441..100864454,+ | |description=CAGE_peak_at_chr9:100864441..100864454,+ | ||
|id=chr9:100864441..100864454,+ | |id=chr9:100864441..100864454,+ | ||
|ontology_enrichment_celltype=CL:0000542!5.12e-33!53;CL:0000051!5.12e-33!53;CL:0000838!2.07e-31!52;CL:0000738!4.09e-28!140;CL:0000084!1.51e-26!25;CL:0000827!1.51e-26!25;CL:0000791!6.22e-26!18;CL:0000789!6.22e-26!18;CL:0002420!6.22e-26!18;CL:0002419!6.22e-26!18;CL:0000790!6.22e-26!18;CL:0000037!3.56e-24!172;CL:0000566!3.56e-24!172;CL:0002087!2.65e-23!119;CL:0000988!3.88e-22!182;CL:0002032!4.91e-18!165;CL:0000837!4.91e-18!165;CL:0002031!8.56e-17!124;CL:0000624!1.18e-16!6;CL:0000625!1.20e-10!11;CL:0000784!1.39e-09!3;CL:0000623!2.60e-09!3;CL:0000825!2.60e-09!3;CL:0000898!5.51e-09!3;CL:0000767!2.48e-08!3;CL:0000842!2.48e-08!3 | |ontology_enrichment_celltype=CL:0000542!5.12e-33!53;CL:0000051!5.12e-33!53;CL:0000838!2.07e-31!52;CL:0000738!4.09e-28!140;CL:0000084!1.51e-26!25;CL:0000827!1.51e-26!25;CL:0000791!6.22e-26!18;CL:0000789!6.22e-26!18;CL:0002420!6.22e-26!18;CL:0002419!6.22e-26!18;CL:0000790!6.22e-26!18;CL:0000037!3.56e-24!172;CL:0000566!3.56e-24!172;CL:0002087!2.65e-23!119;CL:0000988!3.88e-22!182;CL:0002032!4.91e-18!165;CL:0000837!4.91e-18!165;CL:0002031!8.56e-17!124;CL:0000624!1.18e-16!6;CL:0000625!1.20e-10!11;CL:0000784!1.39e-09!3;CL:0000623!2.60e-09!3;CL:0000825!2.60e-09!3;CL:0000898!5.51e-09!3;CL:0000767!2.48e-08!3;CL:0000842!2.48e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0000624;8.00e-28;6!CL:0000784;6.26e-21;3!CL:0000623;2.36e-20;3!CL:0000791;3.42e-17;18!CL:0000789;3.42e-17;18!CL:0002419;3.42e-17;18!CL:0000084;1.14e-15;25!CL:0000542;2.14e-10;53!CL:0000898;4.59e-10;3!CL:0000895;3.93e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000624,9.21e-28,6;CL:0000784,4.97e-21,3;CL:0000623,2.28e-20,3;CL:0000825,2.28e-20,3;CL:0000791,3.82e-17,18;CL:0000789,3.82e-17,18;CL:0002420,3.82e-17,18;CL:0002419,3.82e-17,18;CL:0000790,3.82e-17,18;CL:0000838,1.00e-15,52;CL:0000084,1.39e-15,25;CL:0000827,1.39e-15,25;CL:0000542,2.19e-15,53;CL:0000051,2.19e-15,53;CL:0000738,1.01e-11,136;CL:0000898,4.80e-10,3;CL:0000037,8.04e-09,168;CL:0002087,3.21e-08,115;CL:0000988,3.40e-08,177;CL:0000810,4.07e-08,1;CL:0000895,4.07e-08,1;CL:0002436,4.07e-08,1;CL:0002427,4.07e-08,1;CL:0002428,4.07e-08,1;CL:0002429,4.07e-08,1;CL:0002433,4.07e-08,1;CL:0002431,4.07e-08,1;CL:0002432,4.07e-08,1 | |||
|ontology_enrichment_development_v019=CL:0000790;3.42e-17;18!CL:0000051;2.14e-10;53!CL:0002427;3.93e-08;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!4.13e-11!4;UBERON:0005058!4.13e-11!4;UBERON:0009113!4.13e-11!4;UBERON:0003295!4.13e-11!4;UBERON:0005562!4.13e-11!4;UBERON:0004177!3.42e-09!7;UBERON:0003351!2.20e-07!6 | |ontology_enrichment_uberon=UBERON:0002370!4.13e-11!4;UBERON:0005058!4.13e-11!4;UBERON:0009113!4.13e-11!4;UBERON:0003295!4.13e-11!4;UBERON:0005562!4.13e-11!4;UBERON:0004177!3.42e-09!7;UBERON:0003351!2.20e-07!6 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.65e-07,4;UBERON:0005058,1.65e-07,4;UBERON:0009113,1.65e-07,4;UBERON:0003295,1.65e-07,4;UBERON:0005562,1.65e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.328402357799783,0.393553906568396,0.393364276848904,0.767658796194425,0.619264493264304,0,0,0,0.0774672005803016,0.142169232487422,0,0,0.401088894940283,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0.768482119587302,0.236482229888585,0,0,0,0,0,0.224723484445085,0.306083892370903,0,0,0,0,0,0,0.56738522469114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14681968437569,0,1.12101712596307,0,2.55722701147983,2.35806457649499,3.08402248499264,1.67186495390678,0.32592226663359,0,0,2.22820913770347,4.12448270464772,4.43067789167242,5.95768500283034,2.43373507478783,2.86130564631732,0.328875809207352,0.276350017785848,0.579606171470105,2.07601188426885,1.07016331235885,0,1.35971211237079,3.06576394881537,0.68725489096526,1.77113784413652,0,0.651083453856419,0,0.150575119077773,0.511946444617674,0,0.473554504088034,0,2.62088766192152,1.06976078313403,0.724122019413995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.62339686735876,4.57595928624102,4.08603251462521,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32438929824395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336255431980582,2.56139988262505,2.80315847317372,2.05348858047597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,1.72571360654893,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0.411362273086194,0,0.540031437238115,0,0,0,0,0.185803175125719,0,0.640276590135727,0,0.199579371432817,0,0,0,0.561594356226918,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02193298195737,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0.592834895693833,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.59996218756479,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230467975111559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0.187967835959707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0.645889098360061,1.80016671457988,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0.402547587182052,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.328402357799783,0.393553906568396,0.393364276848904,0.767658796194425,0.619264493264304,0,0,0,0.0774672005803016,0.142169232487422,0,0,0.401088894940283,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0.768482119587302,0.236482229888585,0,0,0,0,0,0.224723484445085,0.306083892370903,0,0,0,0,0,0,0.56738522469114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14681968437569,0,1.12101712596307,0,2.55722701147983,2.35806457649499,3.08402248499264,1.67186495390678,0.32592226663359,0,0,2.22820913770347,4.12448270464772,4.43067789167242,5.95768500283034,2.43373507478783,2.86130564631732,0.328875809207352,0.276350017785848,0.579606171470105,2.07601188426885,1.07016331235885,0,1.35971211237079,3.06576394881537,0.68725489096526,1.77113784413652,0,0.651083453856419,0,0.150575119077773,0.511946444617674,0,0.473554504088034,0,2.62088766192152,1.06976078313403,0.724122019413995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.62339686735876,4.57595928624102,4.08603251462521,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32438929824395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336255431980582,2.56139988262505,2.80315847317372,2.05348858047597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,1.72571360654893,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0.411362273086194,0,0.540031437238115,0,0,0,0,0.185803175125719,0,0.640276590135727,0,0.199579371432817,0,0,0,0.561594356226918,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02193298195737,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0.592834895693833,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.59996218756479,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230467975111559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0.187967835959707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0.645889098360061,1.80016671457988,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0.402547587182052,0 | ||
|short_description=p@chr9:100864441..100864454,+ | |short_description=p@chr9:100864441..100864454,+ | ||
}} | }} |
Latest revision as of 21:02, 31 July 2015
Short description: | p@chr9:100864441..100864454, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:100864441..100864454, + |
Coexpression cluster: | C4032_CD4_Dendritic_Natural_CD8_CD19_blood_thymus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 1.65e-07 | 4 |
hemolymphoid system gland | 1.65e-07 | 4 |
thymic region | 1.65e-07 | 4 |
pharyngeal gland | 1.65e-07 | 4 |
thymus primordium | 1.65e-07 | 4 |