FFCP PHASE1:Hg19::chr8:95655294..95655310,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54845 | |EntrezGene=54845 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25966 | |HGNC=25966 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-217bp_to_ENST00000522920_5end | |association_with_transcript=-217bp_to_ENST00000522920_5end | ||
|cluster_id=chr8:95655294..95655310,+ | |||
|coexpression_cluster_id=C4781 | |coexpression_cluster_id=C4781 | ||
|description=CAGE_peak_8_at_ESRP1_5end | |description=CAGE_peak_8_at_ESRP1_5end | ||
|id=chr8:95655294..95655310,+ | |id=chr8:95655294..95655310,+ | ||
|ontology_enrichment_celltype=CL:0000066!1.58e-14!254;CL:0002076!2.38e-09!43;CL:0000223!1.13e-08!59;CL:0000039!1.18e-07!7;CL:0000586!1.18e-07!7 | |ontology_enrichment_celltype=CL:0000066!1.58e-14!254;CL:0002076!2.38e-09!43;CL:0000223!1.13e-08!59;CL:0000039!1.18e-07!7;CL:0000586!1.18e-07!7 | ||
|ontology_enrichment_celltype_v019=CL:0002178;2.11e-14;3!CL:0000167;2.96e-11;1!CL:0000164;2.96e-11;1!CL:0000502;2.96e-11;1!CL:0000172;2.96e-11;1!CL:0000173;2.96e-11;1!CL:0000082;1.46e-08;19!CL:0000197;8.09e-08;6!CL:0000098;8.09e-08;6!CL:0002167;8.09e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002178,3.39e-14,3;CL:0000167,1.97e-11,1;CL:0000164,1.97e-11,1;CL:0000502,1.97e-11,1;CL:0000172,1.97e-11,1;CL:0000173,1.97e-11,1;CL:0002351,1.97e-11,1;CL:0000066,6.60e-09,253;CL:0000082,1.49e-08,19;CL:0000197,8.10e-08,6;CL:0000098,8.10e-08,6;CL:0002167,8.10e-08,6 | |||
|ontology_enrichment_development_v019=UBERON:0001041;1.77e-11;30!CL:0002351;2.96e-11;1 | |||
|ontology_enrichment_disease=DOID:0050687!4.43e-21!143;DOID:14566!1.74e-17!239;DOID:162!5.29e-17!235;DOID:305!1.24e-15!106;DOID:1749!1.11e-11!14;DOID:3095!1.47e-08!22;DOID:2994!1.47e-08!22 | |ontology_enrichment_disease=DOID:0050687!4.43e-21!143;DOID:14566!1.74e-17!239;DOID:162!5.29e-17!235;DOID:305!1.24e-15!106;DOID:1749!1.11e-11!14;DOID:3095!1.47e-08!22;DOID:2994!1.47e-08!22 | ||
|ontology_enrichment_disease_v019=DOID:4430;2.96e-11;1!DOID:5409;7.34e-11;4!DOID:1324;8.51e-11;15!DOID:3905;1.74e-10;9!DOID:0050615;3.91e-10;16!DOID:169;1.57e-07;6!DOID:1749;5.23e-07;14!DOID:3119;5.45e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,1.97e-11,1;DOID:5409,6.02e-11,4;DOID:1324,8.75e-11,15;DOID:3905,1.69e-10,9;DOID:0050615,4.01e-10,16;DOID:0050687,9.85e-10,143;DOID:305,5.66e-08,106;DOID:169,1.34e-07,6;DOID:1749,5.80e-07,14;DOID:3119,6.98e-07,14 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0000945;5.27e-09;5!UBERON:0010039;5.27e-09;5!UBERON:0004802;1.46e-08;19!UBERON:0000115;1.46e-08;19!UBERON:0002048;2.04e-07;22!UBERON:0004807;2.04e-07;22!UBERON:0000117;2.04e-07;22!UBERON:0000171;2.04e-07;22!UBERON:0000170;2.04e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004802,1.49e-08,19;UBERON:0000115,1.49e-08,19;UBERON:0002048,2.08e-07,22;UBERON:0000117,2.08e-07,22;UBERON:0000171,2.08e-07,22;UBERON:0000170,2.08e-07,22;UBERON:0005597,2.08e-07,22;UBERON:0000118,2.08e-07,22;UBERON:0004119,4.65e-07,160;UBERON:0000925,4.65e-07,160;UBERON:0006595,4.65e-07,160;UBERON:0004921,6.33e-07,118 | |||
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| ||
|short_description=p8@ESRP1 | |short_description=p8@ESRP1 | ||
}} | }} |
Latest revision as of 13:14, 19 September 2015
Short description: | p8@ESRP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_ESRP1_5end |
Coexpression cluster: | C4781_Prostate_nasal_malignant_signet_bile_hepatoma_small |
Association with transcript: | -217bp_to_ENST00000522920_5end |
EntrezGene: | ESRP1 |
HGNC: | 25966 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of stomach | 3.39e-14 | 3 |
peptide hormone secreting cell | 1.97e-11 | 1 |
enteroendocrine cell | 1.97e-11 | 1 |
type D enteroendocrine cell | 1.97e-11 | 1 |
somatostatin secreting cell | 1.97e-11 | 1 |
pancreatic D cell | 1.97e-11 | 1 |
progenitor cell of endocrine pancreas | 1.97e-11 | 1 |
epithelial cell | 6.60e-09 | 253 |
epithelial cell of lung | 1.49e-08 | 19 |
receptor cell | 8.10e-08 | 6 |
sensory epithelial cell | 8.10e-08 | 6 |
olfactory epithelial cell | 8.10e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
respiratory tract epithelium | 1.49e-08 | 19 |
lung epithelium | 1.49e-08 | 19 |
lung | 2.08e-07 | 22 |
respiratory tube | 2.08e-07 | 22 |
respiration organ | 2.08e-07 | 22 |
pair of lungs | 2.08e-07 | 22 |
lung primordium | 2.08e-07 | 22 |
lung bud | 2.08e-07 | 22 |
endoderm-derived structure | 4.65e-07 | 160 |
endoderm | 4.65e-07 | 160 |
presumptive endoderm | 4.65e-07 | 160 |
subdivision of digestive tract | 6.33e-07 | 118 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 1.97e-11 | 1 |
lung small cell carcinoma | 6.02e-11 | 4 |
lung cancer | 8.75e-11 | 15 |
lung carcinoma | 1.69e-10 | 9 |
respiratory system cancer | 4.01e-10 | 16 |
cell type cancer | 9.85e-10 | 143 |
carcinoma | 5.66e-08 | 106 |
neuroendocrine tumor | 1.34e-07 | 6 |
squamous cell carcinoma | 5.80e-07 | 14 |
gastrointestinal system cancer | 6.98e-07 | 14 |