FFCP PHASE1:Hg19::chr8:42033383..42033398,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:42033383..42033398,- | |||
|coexpression_cluster_id=C471 | |coexpression_cluster_id=C471 | ||
|description=CAGE_peak_at_chr8:42033383..42033398,- | |description=CAGE_peak_at_chr8:42033383..42033398,- | ||
|id=chr8:42033383..42033398,- | |id=chr8:42033383..42033398,- | ||
|ontology_enrichment_celltype=CL:0000183!1.56e-18!59;CL:0000192!1.02e-17!42;CL:0000514!1.02e-17!42;CL:0000187!1.65e-17!54;CL:0000680!3.75e-17!57;CL:0000056!3.75e-17!57;CL:0000355!3.75e-17!57;CL:0000055!9.93e-17!180;CL:0000393!1.66e-15!60;CL:0000211!1.66e-15!60;CL:0000359!2.92e-11!32;CL:0000222!1.18e-10!119 | |ontology_enrichment_celltype=CL:0000183!1.56e-18!59;CL:0000192!1.02e-17!42;CL:0000514!1.02e-17!42;CL:0000187!1.65e-17!54;CL:0000680!3.75e-17!57;CL:0000056!3.75e-17!57;CL:0000355!3.75e-17!57;CL:0000055!9.93e-17!180;CL:0000393!1.66e-15!60;CL:0000211!1.66e-15!60;CL:0000359!2.92e-11!32;CL:0000222!1.18e-10!119 | ||
|ontology_enrichment_celltype_v019=CL:0000192;2.00e-23;43!CL:0000359;3.98e-20;32!CL:1000306;1.85e-15;4!CL:0002547;1.85e-15;4!CL:0002539;1.65e-13;10!CL:0002595;3.21e-13;5!CL:0000187;2.04e-12;55!CL:0002593;1.83e-09;2!CL:0000393;2.04e-09;61!CL:0000211;2.04e-09;61 | |||
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|ontology_enrichment_development_v019=CL:0000514;2.00e-23;43!CL:0000355;1.94e-11;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060084;1.99e-13;3!DOID:127;1.99e-13;3!DOID:0060072;3.60e-10;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,1.88e-13,3;DOID:127,1.88e-13,3;DOID:0060072,3.45e-10,4 | |||
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|phase1_expression=0.181678379270557,0,0.422863212287913,0,0,0,0,0,0,0.245733936501509,0.697801167972428,1.74753097704138,0.527533956456907,0.247532705920093,0,2.6893005858071,0,1.46062018077475,0.975865597581014,0.123121058076788,0.612002073732759,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01210257911091,0.767175371061182,0,0,0.144846518960824,0,0,0,0.443458794925128,0.43917392846563,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.417989933073621,0,0,0,0,0,0,0,0,0,0,0,0,0.949265659568129,0.183201743930407,0,0,0,0,1.51956613997496,1.85372853138506,4.30254931123221,1.06400514659507,0,0,0,0.311211035399766,0.134710672069688,0.163461903113459,0,0,0,0,0,0,0,0.161872944368132,0.140450806702248,0,0.491337269247072,0,0,0,0.910161361938026,2.15585442544872,0.841680569770331,0.125118519871964,0,0,0,0,0.907457465280168,0,0,0,0.300091096084402,0.206105058476878,0,0,0,0.0974370051611986,0.252433774244115,0,0.161646056818812,0.355009592516614,0,0,0,0.272746120590835,0,0,0,0.116193942869518,0.10366105501537,0,0,0,0.643240938192885,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0.8231480226628,0,0,0,0,0,0,2.05881372358231,0,0,0,0.277765335475589,0,0,1.44331342025273,0.115930404975077,1.05667824812239,0.144366447761074,0,0,0,0,0,0,0,0,0,0.567100388969546,0.358234090811393,0.581267877027924,0,0,0,0,0.144119953416961,0,0.126995788584338,0,0,0,0,0,0.285826432630578,0.112131084345361,0,0.51336800074665,0,0,0,3.45719551560332,0,0,0,0,1.57275793023962,0,0,0.325736184293735,0.710783897485092,0,5.12446941001296,0.871533458600294,0,0,0,0,0.479249710983165,0,0,0.723906533337896,0,0,0,0,0,0,0,0,0,0.335032530668698,0,0,0,0,0.24538298343828,0,0.271265023699736,0,0,0,0,0,2.27407504055985,0,0,0,0,0.587403472388222,0.343143423810856,0,0,0,0.303127571446259,0,0.604780586659361,0.248107807818777,0.153461973288062,0,0.256278298511402,0,0.64341568457443,0,0.616838775210622,0.355123450626254,0.328508624055237,0,0.464841513839837,0,1.60405176242628,0,2.75554675595056,0.364182336013434,1.44236856455367,0.902399225814824,0.539107359730903,0,1.46139224653261,0.633309773357254,0,0,0.215915916102139,0,1.62567862526312,0,1.27438136522519,0,1.11937377361089,0,0,0,0.328014645699706,0,0,0,0,0,0,1.6068392984416,0,0.154048617114644,0,0.275673144969061,0,0,0.170453254832202,0.0890320356467374,0,0,0,0,0,3.77774816196768,2.0911118104818,0,1.59691809095107,2.60979897622522,1.48259375283136,0.143124886741991,0,0.316379424718726,0,1.79128453917934,0.42793898803392,0,0,1.2591072030832,1.37268514868027,0.353437207037059,1.81964233415984,0,0.842516912477962,0.48763373908959,7.31140468893853,4.22600587027022,0.409499734223957,3.67654123079653,5.65040583101214,0,1.99031692572366,3.06915619677634,1.15755106853338,0,0,0.6196469961995,0.281695602532241,1.00387946542836,0.196498082026242,0,1.41904425628239,0,0,0.379473173765715,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.445234820091624,0,0,0.19924798825107,0,0,0.102268682502155,0,0.622079175323615,0.179736702294654,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0.113942055847001,0,0,0,0,0.641183153813036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379119477770928,0,0.103688191397247,0,0,0,0,0,0,0,0,0.261177619741208,0.52418000472609,0,0.19351266257817,0,0,0.290967049465258,0,0,0.274083849293502,0,0,0,0,0,0.19980960958213,0,0,0,0,0,0,0.271808412147228,0.313808538937,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.788057072991982,0.157363764404994,0.105600336519406,0,0,0,0,0,4.3439968140297,7.77799342081141,22.5345278475492,0,0,0,0,0,0,0.129282956361551,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0.138348634936231,0,1.36484205787483,0.570930667089935,6.11691131215246,0,0,0.298509605773748,0.233713309847224,0,0,0,0,0.457680136793847,0.907385542579434,0.15543720058278,0,0.318593534327405,0,0.155262956876259,2.07353103920428,0.53168342911599,0,0,5.33127297036314,1.62748293281865,0.181848659202559,0.107410557042488,0,0.796191777397232,0,0.686791410365586,0,0,0,0,0,0,0,0.244736704506468,0.358177682162975,0,0,1.06013487567529,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0.352675943690684,3.062454773532,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,1.80149109261106,0,0,0,0,0,0,0,0.496211178389294,0,0.383287282918786,0,0,0.606965604236632,0,0.0887023701626388,0,0,0,0,0,0,0.235479278551542,0,0,0,0,0,0.214429632529969,0,0.348724276104376,0,0,0,0,0,0,0.118332000730565,0,0,0.4582137370881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.437119121007915,0,0.245148321753905,0,0,0,0,0,0,0,0,0,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0.432626562123789,0,0,0,0,0,0.0918948995348449,0,0,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| ||
|short_description=p@chr8:42033383..42033398,- | |short_description=p@chr8:42033383..42033398,- | ||
}} | }} |
Latest revision as of 18:29, 31 July 2015
Short description: | p@chr8:42033383..42033398, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:42033383..42033398, - |
Coexpression cluster: | C471_Smooth_Fibroblast_leiomyoma_mesenchymal_Mesothelial_meningioma_Prostate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 6.79e-31 | 43 |
smooth muscle myoblast | 6.79e-31 | 43 |
muscle cell | 1.11e-25 | 55 |
muscle precursor cell | 4.45e-24 | 58 |
myoblast | 4.45e-24 | 58 |
multi-potent skeletal muscle stem cell | 4.45e-24 | 58 |
electrically responsive cell | 1.23e-22 | 61 |
electrically active cell | 1.23e-22 | 61 |
vascular associated smooth muscle cell | 7.90e-21 | 32 |
fibroblast of tunica adventitia of artery | 1.60e-15 | 4 |
fibroblast of the aortic adventitia | 1.60e-15 | 4 |
mesodermal cell | 6.49e-15 | 121 |
aortic smooth muscle cell | 1.35e-13 | 10 |
smooth muscle cell of the subclavian artery | 2.25e-13 | 5 |
smooth muscle cell of the internal thoracic artery | 1.95e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 1.88e-13 | 3 |
leiomyoma | 1.88e-13 | 3 |
benign neoplasm | 3.45e-10 | 4 |