FFCP PHASE1:Hg19::chr8:42033364..42033376,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:42033364..42033376,- | |||
|coexpression_cluster_id=C471 | |coexpression_cluster_id=C471 | ||
|description=CAGE_peak_at_chr8:42033364..42033376,- | |description=CAGE_peak_at_chr8:42033364..42033376,- | ||
|id=chr8:42033364..42033376,- | |id=chr8:42033364..42033376,- | ||
|ontology_enrichment_celltype=CL:0000183!2.38e-20!59;CL:0000680!9.49e-19!57;CL:0000056!9.49e-19!57;CL:0000355!9.49e-19!57;CL:0000187!1.39e-17!54;CL:0000192!4.70e-17!42;CL:0000514!4.70e-17!42;CL:0000393!9.71e-15!60;CL:0000211!9.71e-15!60;CL:0000055!1.71e-14!180;CL:0000359!5.25e-11!32;CL:0000222!1.45e-10!119;CL:1000507!4.12e-07!12;CL:1000494!4.12e-07!12 | |ontology_enrichment_celltype=CL:0000183!2.38e-20!59;CL:0000680!9.49e-19!57;CL:0000056!9.49e-19!57;CL:0000355!9.49e-19!57;CL:0000187!1.39e-17!54;CL:0000192!4.70e-17!42;CL:0000514!4.70e-17!42;CL:0000393!9.71e-15!60;CL:0000211!9.71e-15!60;CL:0000055!1.71e-14!180;CL:0000359!5.25e-11!32;CL:0000222!1.45e-10!119;CL:1000507!4.12e-07!12;CL:1000494!4.12e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0002595;4.07e-23;5!CL:0002593;2.53e-15;2!CL:0000359;5.47e-13;32!CL:0000192;3.52e-12;43!CL:0002591;1.63e-08;1!CL:0002379;2.17e-08;1!CL:0002616;5.06e-08;1!CL:1000306;5.64e-08;4!CL:0002547;5.64e-08;4!CL:0002539;8.63e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002595,4.69e-23,5;CL:0002593,3.14e-15,2;CL:0000192,1.45e-14,43;CL:0000514,1.45e-14,43;CL:0000359,5.34e-13,32;CL:0000187,5.10e-11,55;CL:0000680,2.32e-10,58;CL:0000056,2.32e-10,58;CL:0000355,2.32e-10,58;CL:0000393,9.06e-10,61;CL:0000211,9.06e-10,61;CL:0002591,1.63e-08,1;CL:0002379,2.17e-08,1;CL:0002616,3.57e-08,1;CL:1000306,5.26e-08,4;CL:0002547,5.26e-08,4;CL:0002539,8.37e-07,10 | |||
|ontology_enrichment_development_v019=CL:0000514;3.52e-12;43!UBERON:0005795;3.94e-07;10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060084;1.20e-22;3!DOID:127;1.20e-22;3!DOID:0060072;3.94e-17;4!DOID:2394;4.83e-12;14!DOID:3620;2.17e-08;1!DOID:3565;2.17e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,1.20e-22,3;DOID:127,1.20e-22,3;DOID:0060072,3.94e-17,4;DOID:2394,5.44e-12,14;DOID:3620,2.17e-08,1;DOID:3565,2.17e-08,1 | |||
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|ontology_enrichment_uberon_v019=UBERON:0003834;4.07e-23;5!UBERON:0001533;4.07e-23;5!UBERON:0003513;1.41e-16;7!UBERON:0002456;2.53e-15;2!UBERON:0004573;1.09e-14;33!UBERON:0004571;1.09e-14;33!UBERON:0001637;4.15e-10;42!UBERON:0003509;4.15e-10;42!UBERON:0004572;4.15e-10;42!UBERON:0000947;3.78e-08;21!UBERON:0010191;3.78e-08;21!UBERON:0004797;5.64e-08;4!UBERON:0000415;5.64e-08;4!UBERON:0007240;5.64e-08;4!UBERON:0005742;5.64e-08;4!UBERON:0005734;5.64e-08;4!UBERON:0004664;5.64e-08;4!UBERON:0004663;5.64e-08;4!UBERON:0007500;3.81e-07;56!UBERON:0001981;3.81e-07;56!UBERON:0004537;3.81e-07;56!UBERON:0004237;8.63e-07;10!UBERON:0004695;8.63e-07;10!UBERON:0002111;8.63e-07;10!UBERON:0004178;8.63e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003834,4.69e-23,5;UBERON:0001533,4.69e-23,5;UBERON:0003513,1.56e-16,7;UBERON:0004573,7.07e-16,33;UBERON:0004571,7.07e-16,33;UBERON:0002456,3.14e-15,2;UBERON:0001637,4.35e-15,42;UBERON:0003509,4.35e-15,42;UBERON:0004572,4.35e-15,42;UBERON:0000055,1.49e-10,68;UBERON:0007500,2.99e-10,59;UBERON:0001981,2.99e-10,59;UBERON:0004537,2.99e-10,59;UBERON:0006965,2.99e-10,59;UBERON:0001134,1.39e-09,62;UBERON:0002036,1.39e-09,62;UBERON:0003082,1.39e-09,62;UBERON:0002385,3.11e-09,64;UBERON:0001015,3.11e-09,64;UBERON:0000383,3.11e-09,64;UBERON:0002049,5.96e-09,78;UBERON:0007798,5.96e-09,78;UBERON:0004872,2.98e-08,83;UBERON:0000947,3.59e-08,21;UBERON:0010191,3.59e-08,21;UBERON:0002329,3.70e-08,71;UBERON:0003059,3.70e-08,71;UBERON:0007282,3.70e-08,71;UBERON:0004290,3.70e-08,71;UBERON:0009618,3.70e-08,71;UBERON:0003077,5.06e-08,72;UBERON:0007285,5.06e-08,72;UBERON:0000415,5.26e-08,4;UBERON:0007240,5.26e-08,4;UBERON:0005742,5.26e-08,4;UBERON:0005734,5.26e-08,4;UBERON:0004664,5.26e-08,4;UBERON:0004663,5.26e-08,4;UBERON:0007524,6.87e-08,73;UBERON:0007503,2.81e-07,78;UBERON:0004535,4.91e-07,109;UBERON:0004237,8.37e-07,10;UBERON:0004695,8.37e-07,10;UBERON:0002111,8.37e-07,10;UBERON:0004178,8.37e-07,10;UBERON:0001009,8.63e-07,112;UBERON:0000486,9.67e-07,83 | |||
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|short_description=p@chr8:42033364..42033376,- | |short_description=p@chr8:42033364..42033376,- | ||
}} | }} |
Latest revision as of 18:29, 31 July 2015
Short description: | p@chr8:42033364..42033376, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:42033364..42033376, - |
Coexpression cluster: | C471_Smooth_Fibroblast_leiomyoma_mesenchymal_Mesothelial_meningioma_Prostate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the subclavian artery | 4.69e-23 | 5 |
smooth muscle cell of the internal thoracic artery | 3.14e-15 | 2 |
smooth muscle cell | 1.45e-14 | 43 |
smooth muscle myoblast | 1.45e-14 | 43 |
vascular associated smooth muscle cell | 5.34e-13 | 32 |
muscle cell | 5.10e-11 | 55 |
muscle precursor cell | 2.32e-10 | 58 |
myoblast | 2.32e-10 | 58 |
multi-potent skeletal muscle stem cell | 2.32e-10 | 58 |
electrically responsive cell | 9.06e-10 | 61 |
electrically active cell | 9.06e-10 | 61 |
smooth muscle cell of the pulmonary artery | 1.63e-08 | 1 |
meningothelial cell | 2.17e-08 | 1 |
perirenal adipocyte cell | 3.57e-08 | 1 |
fibroblast of tunica adventitia of artery | 5.26e-08 | 4 |
fibroblast of the aortic adventitia | 5.26e-08 | 4 |
aortic smooth muscle cell | 8.37e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 1.20e-22 | 3 |
leiomyoma | 1.20e-22 | 3 |
benign neoplasm | 3.94e-17 | 4 |
ovarian cancer | 5.44e-12 | 14 |
central nervous system cancer | 2.17e-08 | 1 |
meningioma | 2.17e-08 | 1 |