FFCP PHASE1:Hg19::chr8:42033253..42033264,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:42033253..42033264,- | |||
|coexpression_cluster_id=C471 | |coexpression_cluster_id=C471 | ||
|description=CAGE_peak_at_chr8:42033253..42033264,- | |description=CAGE_peak_at_chr8:42033253..42033264,- | ||
|id=chr8:42033253..42033264,- | |id=chr8:42033253..42033264,- | ||
|ontology_enrichment_celltype=CL:0000183!4.77e-22!59;CL:0000680!2.48e-19!57;CL:0000056!2.48e-19!57;CL:0000355!2.48e-19!57;CL:0000187!3.89e-19!54;CL:0000192!1.06e-18!42;CL:0000514!1.06e-18!42;CL:0000393!1.69e-16!60;CL:0000211!1.69e-16!60;CL:0000055!2.15e-15!180;CL:0000359!4.81e-13!32;CL:0000222!2.19e-09!119;CL:1000306!5.89e-09!4;CL:0002547!5.89e-09!4;CL:0000569!2.32e-08!4;CL:0000011!2.32e-08!4;CL:0002539!2.90e-08!10;CL:0002592!1.14e-07!3;CL:0002579!3.26e-07!3;CL:0000220!6.41e-07!246;CL:0002622!7.14e-07!3;CL:0002321!8.83e-07!248 | |ontology_enrichment_celltype=CL:0000183!4.77e-22!59;CL:0000680!2.48e-19!57;CL:0000056!2.48e-19!57;CL:0000355!2.48e-19!57;CL:0000187!3.89e-19!54;CL:0000192!1.06e-18!42;CL:0000514!1.06e-18!42;CL:0000393!1.69e-16!60;CL:0000211!1.69e-16!60;CL:0000055!2.15e-15!180;CL:0000359!4.81e-13!32;CL:0000222!2.19e-09!119;CL:1000306!5.89e-09!4;CL:0002547!5.89e-09!4;CL:0000569!2.32e-08!4;CL:0000011!2.32e-08!4;CL:0002539!2.90e-08!10;CL:0002592!1.14e-07!3;CL:0002579!3.26e-07!3;CL:0000220!6.41e-07!246;CL:0002622!7.14e-07!3;CL:0002321!8.83e-07!248 | ||
|ontology_enrichment_celltype_v019=CL:0002591;1.67e-23;1!CL:0002593;2.90e-12;2!CL:0000359;3.64e-12;32!CL:0002231;1.30e-08;3!CL:0002592;1.30e-08;3!CL:0000192;5.57e-08;43!CL:1000306;9.10e-07;4!CL:0002547;9.10e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002591,2.10e-23,1;CL:0002593,3.62e-12,2;CL:0000359,2.09e-11,32;CL:0002592,1.30e-08,3;CL:0000192,1.39e-08,43;CL:0000514,1.39e-08,43;CL:0002231,1.40e-08,3;CL:1000306,8.61e-07,4;CL:0002547,8.61e-07,4;CL:0000187,8.86e-07,55 | |||
|ontology_enrichment_development_v019=UBERON:0005795;7.74e-10;10!CL:0000514;5.57e-08;43 | |||
|ontology_enrichment_disease=DOID:0060084!2.59e-08!3;DOID:127!2.59e-08!3 | |ontology_enrichment_disease=DOID:0060084!2.59e-08!3;DOID:127!2.59e-08!3 | ||
|ontology_enrichment_disease_v019=DOID:0060084;2.30e-30;3!DOID:127;2.30e-30;3!DOID:0060072;4.60e-23;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,1.71e-30,3;DOID:127,1.71e-30,3;DOID:0060072,3.68e-23,4 | |||
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|short_description=p@chr8:42033253..42033264,- | |short_description=p@chr8:42033253..42033264,- | ||
}} | }} |
Latest revision as of 18:28, 31 July 2015
Short description: | p@chr8:42033253..42033264, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:42033253..42033264, - |
Coexpression cluster: | C471_Smooth_Fibroblast_leiomyoma_mesenchymal_Mesothelial_meningioma_Prostate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the pulmonary artery | 2.10e-23 | 1 |
smooth muscle cell of the internal thoracic artery | 3.62e-12 | 2 |
vascular associated smooth muscle cell | 2.09e-11 | 32 |
smooth muscle cell of the coronary artery | 1.30e-08 | 3 |
smooth muscle cell | 1.39e-08 | 43 |
smooth muscle myoblast | 1.39e-08 | 43 |
epithelial cell of prostate | 1.40e-08 | 3 |
fibroblast of tunica adventitia of artery | 8.61e-07 | 4 |
fibroblast of the aortic adventitia | 8.61e-07 | 4 |
muscle cell | 8.86e-07 | 55 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 1.71e-30 | 3 |
leiomyoma | 1.71e-30 | 3 |
benign neoplasm | 3.68e-23 | 4 |