FFCP PHASE1:Hg19::chr8:39771400..39771420,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3620 | |EntrezGene=3620 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6059 | |HGNC=6059 | ||
|TSSclassifier=strong | |||
|UniProt=P14902 | |UniProt=P14902 | ||
|association_with_transcript=12bp_to_ENST00000253513_5end | |association_with_transcript=12bp_to_ENST00000253513_5end | ||
|cluster_id=chr8:39771400..39771420,+ | |||
|coexpression_cluster_id=C61 | |coexpression_cluster_id=C61 | ||
|description=CAGE_peak_1_at_IDO1_5end | |description=CAGE_peak_1_at_IDO1_5end | ||
|id=chr8:39771400..39771420,+ | |id=chr8:39771400..39771420,+ | ||
|ontology_enrichment_celltype=CL:0002057!7.62e-14!42;CL:0000766!5.34e-13!76;CL:0002009!7.59e-13!65;CL:0000860!3.85e-12!45;CL:0002194!1.25e-11!63;CL:0000576!1.25e-11!63;CL:0000040!1.25e-11!63;CL:0000559!1.25e-11!63;CL:0000557!3.29e-11!71;CL:0000839!9.10e-10!70;CL:0000763!1.03e-09!112;CL:0000049!1.03e-09!112;CL:0000990!5.49e-07!8;CL:0000738!6.72e-07!140 | |ontology_enrichment_celltype=CL:0002057!7.62e-14!42;CL:0000766!5.34e-13!76;CL:0002009!7.59e-13!65;CL:0000860!3.85e-12!45;CL:0002194!1.25e-11!63;CL:0000576!1.25e-11!63;CL:0000040!1.25e-11!63;CL:0000559!1.25e-11!63;CL:0000557!3.29e-11!71;CL:0000839!9.10e-10!70;CL:0000763!1.03e-09!112;CL:0000049!1.03e-09!112;CL:0000990!5.49e-07!8;CL:0000738!6.72e-07!140 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.22e-21;33!CL:0002057;1.22e-21;33!CL:0000473;1.61e-16;39!CL:0000234;1.61e-16;39!CL:0000990;1.61e-12;8!CL:0000453;1.29e-10;5!CL:0000451;6.32e-10;10!CL:0000576;6.55e-10;48!CL:0000840;3.98e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002009,2.57e-19,61;CL:0000860,5.74e-19,42;CL:0002057,5.74e-19,42;CL:0000473,4.05e-17,48;CL:0000234,4.05e-17,48;CL:0002194,4.07e-17,59;CL:0000576,4.07e-17,59;CL:0000040,4.07e-17,59;CL:0000559,4.07e-17,59;CL:0000557,8.50e-17,67;CL:0000766,6.08e-16,72;CL:0000839,1.90e-14,66;CL:0000763,4.37e-14,108;CL:0000049,4.37e-14,108;CL:0000990,1.81e-12,8;CL:0000453,1.28e-10,5;CL:0000451,6.91e-10,10;CL:0000738,1.92e-08,136;CL:0000840,4.40e-07,5;CL:0001029,4.40e-07,5;CL:0002032,9.37e-07,161;CL:0000837,9.37e-07,161 | |||
|ontology_enrichment_development_v019=CL:0002057;8.98e-14;42!UBERON:0004872;6.98e-09;7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!3.57e-15!112;UBERON:0002390!6.35e-15!102;UBERON:0003061!6.35e-15!102;UBERON:0001474!1.44e-09!86;UBERON:0002371!1.89e-09!80;UBERON:0002405!1.51e-08!115;UBERON:0004765!2.24e-07!101;UBERON:0001434!2.24e-07!101;UBERON:0007023!7.39e-07!115 | |ontology_enrichment_uberon=UBERON:0002193!3.57e-15!112;UBERON:0002390!6.35e-15!102;UBERON:0003061!6.35e-15!102;UBERON:0001474!1.44e-09!86;UBERON:0002371!1.89e-09!80;UBERON:0002405!1.51e-08!115;UBERON:0004765!2.24e-07!101;UBERON:0001434!2.24e-07!101;UBERON:0007023!7.39e-07!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0004177;2.13e-09;5!UBERON:0005057;2.13e-09;5!UBERON:0002390;2.77e-07;32!UBERON:0000178;8.67e-07;15!UBERON:0000179;8.67e-07;15!UBERON:0000463;8.67e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.14e-23,98;UBERON:0003061,3.14e-23,98;UBERON:0002193,2.62e-22,108;UBERON:0002405,6.05e-17,93;UBERON:0002371,8.69e-14,76;UBERON:0001474,3.23e-13,82;UBERON:0004765,2.78e-11,90;UBERON:0005409,7.74e-10,25;UBERON:0001434,2.50e-09,100;UBERON:0003081,2.02e-08,203;UBERON:0000178,8.64e-07,15;UBERON:0000179,8.64e-07,15;UBERON:0000463,8.64e-07,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.8081286612944,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0.671746422719773,0.971680998056939,0,0,0,0,0.232429036905685,0,0.929119112685311,288.267777106795,136.533656580011,510.328652099567,44.1274471342872,18.719055823931,6.77132432971709,0.376484679085209,0,0.449446968890169,107.741530114558,49.1021411426423,107.408637134239,219.680965924353,152.190770765305,284.291908605307,25.2482037606868,5.10646702222026,14.3249117268982,118.84061866644,74.5720573340888,230.437364232129,80.518133850238,19.8869923433285,55.3809178021548,0.633765858935825,0,1.25795187305026,0.44931452458598,0.600707571366025,1.12507910687956,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0.318565414324097,0,0,0.903450714466637,0.511946444617674,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0.144846518960824,0,4.86634870302636,0,0.221729397462564,0,4.45328856692223,0,0,3.24547393654683,2.43781632218974,1.32957960518865,0,0.571994910780128,0,0,0,0,0,0,0,0.208994966536811,0,0.35576626268671,0,0,0,0,0,0,0,0.22452937262617,0.112611480483322,0,0,0,1.31780417436063,3.87780264148325,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.408308342509787,0,0.103325781175765,7.12801714369232,0.494533858557114,0,0,0.168336113954066,0.125118519871964,0,0,0,0.751190294532984,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0.132529768321485,0,0.207322110030741,0,0,3.12899064659632,1.28648187638577,0,0,0,0.828147600278907,0.337169380156203,0.482022059766964,0.661763836394364,0.653638332277218,1.18635309555548,0.404493924480493,0.588664395376038,0.38474715694639,0,0,0,0,0,0,0,0,0.122988438543114,0.171567810298526,0,0,0,0,0,0,0,0,0.117408694235822,0.433099343283221,0,0.190254152234598,0,0,0.246217006087397,1.63802985597466,0.148631162288728,0,0,0,0,0,0,0,0,0,0.288239906833923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.904318131178758,2.61460037580088,0.099972991182057,0,0,0,0,0,0,0.289562613335158,0,0,0,0.197030760201927,0,0.256686072559497,0,0,0,0,0,0.749007023947182,2.99161459204025,0.828831026872071,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0.82707210449155,0,0.960548020230999,0,0,0,0,0,0.280660094433074,0,0,0,0,0,0,0.246381468041427,0,0.348631135379878,0,0.601519410909855,0,0.229628896329213,0,1.04899531967539,0,0,0,0,1.47772280450026,0,0.340187410553031,0,0,0,0,0,0,0,0,0,0,0,0,17.4139309684651,0,0,0,0,0,0.096670718292122,0,0,0,0,0.145016693914229,0,0.267096106940212,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,11.9419609919329,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.9229039561326,0,0,0,0,21.8202471969833,28.2915766642679,16.5197684280507,7.86164859010704,2.46817363851717,9.07862635669804,10.8006287447623,8.72437693923697,0,0,0.490080431962063,0,0,0,0,0,0.957526850661834,0,0,0,0,0,0,3.38583555603207,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,1.4098700508785,0,0.879049075631364,0,0,0,0,0,0,0,0,2.22617410045812,0,0,1.19548792950642,14.3667636076197,0,0,0,0,0.179736702294654,0,0,0.295930216910801,0,0,0,0,0,0,0,0,0,1.77977555204936,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0.769502585037971,0.227884111694002,0,0,0,2.23300811812344,1.19076871422421,1.5991043280559,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,1.99052386215701,1.59223616106011,4.888241159469,0,0,0,0,1.60515529459758,0,0,0,0,1.18375320854817,2.41981432097328,0,0.568679216656392,0.60129367765797,0,0,1.323967823502,0.313932918407225,0,0,0,0,0.0979923974143777,1.65412492502765,0.698906672968121,3.78369271437556,0,0,0,0.290967049465258,5.64839210825602,0.225980740780532,0,1.58971689362392,0,0,1.76349404553374,0.85381197895741,4.39581141080687,0,0,0,0,0,0,0,0,0.611989305817931,0,0,0,0,0,0,0.279282401272254,0.458320848023367,0.717873024576814,0.399358000997982,0,0,0.134366944973453,0,0,0,0,0,0.0984274815147488,0,0,0,0.160753148465019,0.137539436597234,0,24.5221541791135,6.96421759102155,0,0,0.551639951094387,0.0524545881349981,0.422401346077626,0,0,0.714695326373367,0,0,0,0,0,0,0.082092520749339,0,21.642609480344,0.439656701034247,0,0,0,0,0,12.3873398578526,2.51526888159466,15.7410841031934,2.97699613087171,0,0,0,0,0.7520696820681,1.83807346058077,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0.570930667089935,1.6468607378872,0,0,0.149254802886874,0,0,0.189403005275089,0.251567901752575,0,0,0,0,0,0,0.449803112163605,0,0.829412415681711,0.265841714557995,0,0,0.380805212168795,0,0,0.107410557042488,0,0.398095888698616,0,0,0,0,3.85239660814607,0,0,0.226705925512272,0.231522474323834,18.3552528379851,0.358177682162975,0,0.219284049578707,0.176689145945881,0,0.168942440653073,0,0,2.12701969324168,0,2560.26959784073,2197.18586426209,1936.12357180643,4.58653788384978,0.245772908753719,0,1.59989916683944,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,1.531227386766,0,0,0,0,0,0,0,0,0.0981477185010256,0,0.183428598521679,0,0,0,0.198916222116275,0.752103283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| ||
|short_description=p1@IDO1 | |short_description=p1@IDO1 | ||
}} | }} |
Latest revision as of 05:14, 18 September 2015
Short description: | p1@IDO1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_IDO1_5end |
Coexpression cluster: | C61_migratory_Dendritic_immature_Macrophage_xeroderma_cord_b |
Association with transcript: | 12bp_to_ENST00000253513_5end |
EntrezGene: | IDO1 |
HGNC: | 6059 |
UniProt: | P14902 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage dendritic cell progenitor | 2.57e-19 | 61 |
classical monocyte | 5.74e-19 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.74e-19 | 42 |
defensive cell | 4.05e-17 | 48 |
phagocyte | 4.05e-17 | 48 |
monopoietic cell | 4.07e-17 | 59 |
monocyte | 4.07e-17 | 59 |
monoblast | 4.07e-17 | 59 |
promonocyte | 4.07e-17 | 59 |
granulocyte monocyte progenitor cell | 8.50e-17 | 67 |
myeloid leukocyte | 6.08e-16 | 72 |
myeloid lineage restricted progenitor cell | 1.90e-14 | 66 |
myeloid cell | 4.37e-14 | 108 |
common myeloid progenitor | 4.37e-14 | 108 |
conventional dendritic cell | 1.81e-12 | 8 |
Langerhans cell | 1.28e-10 | 5 |
dendritic cell | 6.91e-10 | 10 |
leukocyte | 1.92e-08 | 136 |
immature conventional dendritic cell | 4.40e-07 | 5 |
common dendritic progenitor | 4.40e-07 | 5 |
hematopoietic oligopotent progenitor cell | 9.37e-07 | 161 |
hematopoietic multipotent progenitor cell | 9.37e-07 | 161 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.14e-23 | 98 |
blood island | 3.14e-23 | 98 |
hemolymphoid system | 2.62e-22 | 108 |
immune system | 6.05e-17 | 93 |
bone marrow | 8.69e-14 | 76 |
bone element | 3.23e-13 | 82 |
skeletal element | 2.78e-11 | 90 |
gastrointestinal system | 7.74e-10 | 25 |
skeletal system | 2.50e-09 | 100 |
lateral plate mesoderm | 2.02e-08 | 203 |
blood | 8.64e-07 | 15 |
haemolymphatic fluid | 8.64e-07 | 15 |
organism substance | 8.64e-07 | 15 |