FFCP PHASE1:Hg19::chr8:29973082..29973088,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:29973082..29973088,+ | |||
|coexpression_cluster_id=C588 | |coexpression_cluster_id=C588 | ||
|description=CAGE_peak_at_chr8:29973082..29973088,+ | |description=CAGE_peak_at_chr8:29973082..29973088,+ | ||
|id=chr8:29973082..29973088,+ | |id=chr8:29973082..29973088,+ | ||
|ontology_enrichment_celltype=CL:0000542!9.09e-16!53;CL:0000051!9.09e-16!53;CL:0000838!1.38e-15!52;CL:0000084!1.27e-14!25;CL:0000827!1.27e-14!25;CL:0000791!6.47e-14!18;CL:0000789!6.47e-14!18;CL:0002420!6.47e-14!18;CL:0002419!6.47e-14!18;CL:0000790!6.47e-14!18;CL:0000037!1.03e-13!172;CL:0000566!1.03e-13!172;CL:0000988!9.27e-13!182;CL:0002032!1.06e-12!165;CL:0000837!1.06e-12!165;CL:0002087!9.19e-12!119;CL:0002031!6.06e-11!124;CL:0000738!1.17e-10!140;CL:0000625!5.68e-09!11 | |ontology_enrichment_celltype=CL:0000542!9.09e-16!53;CL:0000051!9.09e-16!53;CL:0000838!1.38e-15!52;CL:0000084!1.27e-14!25;CL:0000827!1.27e-14!25;CL:0000791!6.47e-14!18;CL:0000789!6.47e-14!18;CL:0002420!6.47e-14!18;CL:0002419!6.47e-14!18;CL:0000790!6.47e-14!18;CL:0000037!1.03e-13!172;CL:0000566!1.03e-13!172;CL:0000988!9.27e-13!182;CL:0002032!1.06e-12!165;CL:0000837!1.06e-12!165;CL:0002087!9.19e-12!119;CL:0002031!6.06e-11!124;CL:0000738!1.17e-10!140;CL:0000625!5.68e-09!11 | ||
|ontology_enrichment_celltype_v019=CL:0000791;1.04e-31;18!CL:0000789;1.04e-31;18!CL:0002419;1.04e-31;18!CL:0000084;4.40e-22;25!CL:0000624;1.92e-18;6!CL:0000625;9.94e-18;11!CL:0000623;2.12e-13;3!CL:0000815;1.28e-09;2!CL:0000792;1.28e-09;2!CL:0002677;1.28e-09;2!CL:0000542;2.31e-07;53!CL:0000226;5.84e-07;3!CL:0000842;5.84e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.14e-31,18;CL:0000789,1.14e-31,18;CL:0002420,1.14e-31,18;CL:0002419,1.14e-31,18;CL:0000790,1.14e-31,18;CL:0000084,4.71e-22,25;CL:0000827,4.71e-22,25;CL:0000624,2.80e-18,6;CL:0000625,8.25e-18,11;CL:0000838,6.25e-15,52;CL:0000542,1.39e-14,53;CL:0000051,1.39e-14,53;CL:0000623,2.42e-13,3;CL:0000825,2.42e-13,3;CL:0000815,1.89e-09,2;CL:0000792,1.89e-09,2;CL:0002677,1.89e-09,2;CL:0000037,1.36e-08,168;CL:0000988,6.88e-08,177;CL:0002032,2.79e-07,161;CL:0000837,2.79e-07,161;CL:0000226,6.29e-07,3;CL:0000842,6.29e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;1.04e-31;18!CL:0000051;2.31e-07;53 | |||
|ontology_enrichment_disease=DOID:162!8.75e-11!235;DOID:14566!1.95e-10!239;DOID:0050686!3.32e-08!137;DOID:2531!7.20e-08!51;DOID:0060083!7.20e-08!51 | |ontology_enrichment_disease=DOID:162!8.75e-11!235;DOID:14566!1.95e-10!239;DOID:0050686!3.32e-08!137;DOID:2531!7.20e-08!51;DOID:0060083!7.20e-08!51 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;9.39e-07;15!UBERON:0000179;9.39e-07;15!UBERON:0000463;9.39e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,9.90e-07,15;UBERON:0000179,9.90e-07,15;UBERON:0000463,9.90e-07,15 | |||
|phase1_expression=0,0.214100523890983,0.281908808191942,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0.125542639594803,0.229240217243854,0.328402357799783,0.236132343941038,0,0.767658796194425,0,0,0,0,0.232401601740905,0.568676929949686,0,0,0.401088894940283,0.868043482863407,0,0.32389366601898,0,0.436194716338694,0.377875943688809,0.485168122375632,0,0,0,0.575384784644301,0.256160706529101,0.236482229888585,0,0,0,0.188242339542605,0,0.224723484445085,0.306083892370903,0,0,0.329851300186716,0.199463657621632,0.426224750532694,0,0,0,0.251248665256743,0,0,0,0,0.316462387440884,0,0.212604299965044,0,0.44931452458598,0,0.48217676009124,0,0.19891667719909,0,0,0,0.889509253863555,0,0.400395987036012,0,0,0.954053754535364,0,0.587237189370939,0.382273228125229,0,0,0.526768169550154,7.27826149421182,3.53709686474248,4.11202997999018,0.167186495390678,2.28145586643513,2.36723902867367,0,1.22551502573691,2.06224135232386,0.886135578334485,1.35401931882508,1.5370958367081,2.60118695119756,2.30213066445147,2.76350017785848,0.869409257205157,3.70716407905151,3.74557159325598,3.1360657141493,0.679856056185397,0.383220493601921,0.68725489096526,2.27717722817553,1.59282707162048,1.30216690771284,0.950452044448374,0.301150238155546,0.255973222308837,1.24930726552346,1.18388626022008,0.821127996921047,3.62892137804518,2.40696176205157,6.22744936696036,0,0,0,0,1.00267582127178,0,0,0,0.378139268656271,0,0.087834785693126,0.0654895377488563,0,0,0,0.348259474598534,0.132957960518865,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0.267899184852239,0,0,0,0,0,0,0,0,0.496971951695318,0,0.132409180813219,0,0,0,0,0,0,0.134710672069688,0.163461903113459,0,0,0,0,0,0,0,0,0.140450806702248,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0.179389635688862,0,0,0.300091096084402,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0.882926198829301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0.880484340132261,0.414656231081544,0.864719720501769,1.38866676769018,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,1.04007436911366,0,0,0,0,0,0,0,0,0,0,0,0.99972991182057,0,0,0,0,0,0,0,0,0,0.336255431980582,1.18218456121156,2.37190332345469,3.85029108839245,0,0,0,0,0,0,0,0,0,0,0,0,0.356857977594324,0,0.117141414992713,0,0,0,0,0,0.173767228936166,0,0,4.34212854858063,3.01999881146064,0.853820462427555,0,0,0,0,0.460385919864187,0.280660094433074,0,0,0,0,0,0,0,0,0,0.362578348774867,0.601519410909855,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0.103041011647722,0,0,0,0,0,0.096670718292122,0,0,0.137836572484531,0.107420244868274,0.145016693914229,0,0,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0.211107635297664,0,0,0,0.192444225451024,0,0,0.282431402330337,0,0,0,0,0,0,0,1.19115887728894,1.64544909234478,0,1.08006287447623,0,0.213648142254946,0.962479855263359,0,0.185803175125719,0.432807638929335,0.995985806877798,0.159426272728822,0,0,0.846694330895531,0,0,0.456469358066384,0.156679895773023,2.50634477090067,0,0.481764225311099,0.403599414382095,0.425846237690326,0,0,0.223676107892416,0.333698283423817,0.19538809540204,0.278406173895242,0,0,0.33307196799782,1.4098700508785,0.18714054040822,0,0.121360521749513,0.111443384277478,0,0,0,0,0,0.422008249231538,0.333926115068718,0.659215496907038,0.844501632511974,0,0.828851746593443,0.503865495708552,0.306806047506464,0.369254416383208,0,0.0898683511473268,0.179021174675609,1.02314474045374,0.197286811273867,0,0,0,0,0,0,0.349839999984783,0,0.341380344856499,0,0.236387681767936,0.689486746482929,0.874813840149763,0,0,0,0,0.552896299656123,0.295547618953547,0,0.10893846351899,0.278847488557207,0.230850775511391,0,0,0.269272933229316,0.325942115766024,0,0,0,0,1.72678282034527,1.16348177330109,0.225595660617181,0,0,0.75901493089674,1.58936578980379,0,0,0,0,0,0,1.22206028986725,0.593042257361244,0.370691816839509,0.104421949505455,0.067401132980677,0,0,0,0,0.485560759068186,0.789168805698781,0,0.30607276163049,0.063186579628488,0.150323419414493,0.207376382794494,0,0,0.313932918407225,0,0.284609546029793,0.138674673013139,0,0.391969589657511,0,0,0.171986032471617,0.0967563312890851,0.0730893170861856,0.0821154570532092,0,0.0882561266915003,0,0.411125773940253,0.397429223405979,0.0633107959558787,0.195551382734803,0.480952921509202,0.426905989478705,0,0,0.229073192331831,0.343189995723929,0.14405479798815,0.248505071130865,0,0.135904206073614,0.313808538937,0.101998217636322,0.288950589901519,0,0.410716136675979,0,0.429765441419957,0.525774708558629,0.558564802544508,0.229160424011684,0,0,0,0,0.134366944973453,0,0,0.0787831823072236,0.164831716762333,0.13480708770837,0.0984274815147488,0.0846733320657845,0.795229689809303,0,0,0.412618309791701,0,0,0,0,0,0.157611414598396,0.104909176269996,0.105600336519406,0,0.191915197319445,0,0,0.25426853765475,0,0,0,0,0.3283700829973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| ||
|short_description=p@chr8:29973082..29973088,+ | |short_description=p@chr8:29973082..29973088,+ | ||
}} | }} |
Latest revision as of 17:51, 31 July 2015
Short description: | p@chr8:29973082..29973088, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:29973082..29973088, + |
Coexpression cluster: | C588_CD4_neuroectodermal_thymus_CD8_neuroepithelioma_Hodgkin_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.14e-31 | 18 |
alpha-beta T cell | 1.14e-31 | 18 |
immature T cell | 1.14e-31 | 18 |
mature T cell | 1.14e-31 | 18 |
immature alpha-beta T cell | 1.14e-31 | 18 |
T cell | 4.71e-22 | 25 |
pro-T cell | 4.71e-22 | 25 |
CD4-positive, alpha-beta T cell | 2.80e-18 | 6 |
CD8-positive, alpha-beta T cell | 8.25e-18 | 11 |
lymphoid lineage restricted progenitor cell | 6.25e-15 | 52 |
lymphocyte | 1.39e-14 | 53 |
common lymphoid progenitor | 1.39e-14 | 53 |
natural killer cell | 2.42e-13 | 3 |
pro-NK cell | 2.42e-13 | 3 |
regulatory T cell | 1.89e-09 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 1.89e-09 | 2 |
naive regulatory T cell | 1.89e-09 | 2 |
hematopoietic stem cell | 1.36e-08 | 168 |
hematopoietic cell | 6.88e-08 | 177 |
hematopoietic oligopotent progenitor cell | 2.79e-07 | 161 |
hematopoietic multipotent progenitor cell | 2.79e-07 | 161 |
single nucleate cell | 6.29e-07 | 3 |
mononuclear cell | 6.29e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 9.90e-07 | 15 |
haemolymphatic fluid | 9.90e-07 | 15 |
organism substance | 9.90e-07 | 15 |