FFCP PHASE1:Hg19::chr19:46714539..46714548,-: Difference between revisions
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|id=chr19:46714539..46714548,-
|short_description=p@chr19:46714539..46714548,-
|description=CAGE_peak_at_chr19:46714539..46714548,-
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr19:46714539..46714548,- | |||
|coexpression_cluster_id=C83 | |||
|description=CAGE_peak_at_chr19:46714539..46714548,- | |||
|id=chr19:46714539..46714548,- | |||
|ontology_enrichment_celltype=CL:0000039!2.26e-18!7;CL:0000586!2.26e-18!7;CL:0002541!1.84e-11!3;CL:1001319!1.16e-08!1;CL:1000600!1.16e-08!1;CL:0000066!2.01e-07!254 | |||
|ontology_enrichment_celltype_v019=CL:0000039;9.26e-43;7!CL:0000586;9.26e-43;7!CL:0000083;1.22e-09;4!CL:0002149;7.58e-07;6!CL:0002255;7.58e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,9.27e-43,7;CL:0000586,9.27e-43,7;CL:0000083,1.32e-09,4;CL:0002149,7.17e-07,6;CL:0002255,7.17e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!5.10e-18!143;DOID:305!9.38e-18!106;DOID:162!1.02e-10!235;DOID:14566!2.04e-10!239;DOID:1799!1.89e-09!1;DOID:10165!1.89e-09!1;DOID:1798!1.89e-09!1;DOID:178!4.91e-09!1;DOID:326!4.91e-09!1;DOID:3978!4.91e-09!1;DOID:3394!4.91e-09!1;DOID:5844!4.91e-09!1;DOID:1749!6.03e-09!14 | |||
|ontology_enrichment_disease_v019=DOID:1799;2.58e-34;1!DOID:10165;2.58e-34;1!DOID:1798;2.58e-34;1!DOID:3095;3.13e-14;22!DOID:2994;3.13e-14;22!DOID:1793;1.22e-09;4!DOID:170;7.58e-07;6!DOID:3001;7.58e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,3.61e-34,1;DOID:10165,3.61e-34,1;DOID:1798,3.61e-34,1;DOID:3095,3.13e-14,22;DOID:2994,3.13e-14,22;DOID:1793,1.32e-09,4;DOID:0050687,1.02e-08,143;DOID:3001,7.17e-07,6;DOID:170,8.02e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0000476!1.84e-11!3;UBERON:0000920!1.84e-11!3;UBERON:0000997!1.07e-08!1;UBERON:0005056!1.07e-08!1;UBERON:0004645!1.16e-08!1;UBERON:0001256!1.16e-08!1;UBERON:0001259!1.16e-08!1;UBERON:0001737!4.22e-08!9;UBERON:0003350!7.63e-07!5 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p@chr19:46714539..46714548,- | |||
}} | }} |
Latest revision as of 15:13, 27 July 2015
Short description: | p@chr19:46714539..46714548, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:46714539..46714548, - |
Coexpression cluster: | C83_choriocarcinoma_pancreatic_placenta_chorionic_HES3GFP_testicular_amniotic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 9.27e-43 | 7 |
germ cell | 9.27e-43 | 7 |
epithelial cell of pancreas | 1.32e-09 | 4 |
epithelial cell of uterus | 7.17e-07 | 6 |
stromal cell of endometrium | 7.17e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 3.61e-34 | 1 |
endocrine pancreas cancer | 3.61e-34 | 1 |
pancreatic endocrine carcinoma | 3.61e-34 | 1 |
germ cell and embryonal cancer | 3.13e-14 | 22 |
germ cell cancer | 3.13e-14 | 22 |
pancreatic cancer | 1.32e-09 | 4 |
cell type cancer | 1.02e-08 | 143 |
female reproductive endometrioid cancer | 7.17e-07 | 6 |
endocrine gland cancer | 8.02e-07 | 6 |