FFCP PHASE1:Hg19::chr8:23225796..23225832,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4017 | |EntrezGene=4017 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=6666 | |HGNC=6666 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=31bp_to_DQ892685,DQ895929_5end | |association_with_transcript=31bp_to_DQ892685,DQ895929_5end | ||
|cluster_id=chr8:23225796..23225832,- | |||
|coexpression_cluster_id=C4744 | |coexpression_cluster_id=C4744 | ||
|description=CAGE_peak_2_at_LOXL2_5end | |description=CAGE_peak_2_at_LOXL2_5end | ||
|id=chr8:23225796..23225832,- | |id=chr8:23225796..23225832,- | ||
|ontology_enrichment_celltype=CL:0000055!1.61e-23!180;CL:0000222!3.85e-23!119;CL:0000144!7.34e-15!625;CL:0000183!1.62e-14!59;CL:0000057!4.30e-13!75;CL:0000548!1.14e-12!679;CL:0000004!1.14e-12!679;CL:0000255!1.14e-12!679;CL:0000187!2.07e-12!54;CL:0000680!2.75e-12!57;CL:0000056!2.75e-12!57;CL:0000355!2.75e-12!57;CL:0000012!3.77e-12!682;CL:0000192!6.05e-12!42;CL:0000514!6.05e-12!42;CL:0002321!1.77e-11!248;CL:0002371!1.83e-11!591;CL:0000220!2.16e-11!246;CL:0000213!2.78e-11!57;CL:0000215!2.78e-11!57;CL:0000393!3.37e-11!60;CL:0000211!3.37e-11!60;CL:0000359!4.33e-09!32;CL:0002334!6.16e-08!12;CL:0002078!4.71e-07!44;CL:0000136!5.49e-07!15;CL:0000003!8.39e-07!722 | |ontology_enrichment_celltype=CL:0000055!1.61e-23!180;CL:0000222!3.85e-23!119;CL:0000144!7.34e-15!625;CL:0000183!1.62e-14!59;CL:0000057!4.30e-13!75;CL:0000548!1.14e-12!679;CL:0000004!1.14e-12!679;CL:0000255!1.14e-12!679;CL:0000187!2.07e-12!54;CL:0000680!2.75e-12!57;CL:0000056!2.75e-12!57;CL:0000355!2.75e-12!57;CL:0000012!3.77e-12!682;CL:0000192!6.05e-12!42;CL:0000514!6.05e-12!42;CL:0002321!1.77e-11!248;CL:0002371!1.83e-11!591;CL:0000220!2.16e-11!246;CL:0000213!2.78e-11!57;CL:0000215!2.78e-11!57;CL:0000393!3.37e-11!60;CL:0000211!3.37e-11!60;CL:0000359!4.33e-09!32;CL:0002334!6.16e-08!12;CL:0002078!4.71e-07!44;CL:0000136!5.49e-07!15;CL:0000003!8.39e-07!722 | ||
|ontology_enrichment_celltype_v019=CL:0000359;4.24e-09;32!CL:0002334;4.40e-09;12!CL:0000192;1.12e-08;43!CL:0000134;2.16e-08;55!CL:0002595;9.91e-08;5!CL:0000048;1.47e-07;58!CL:0000723;9.66e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,5.67e-15,121;CL:0000057,2.02e-13,76;CL:0000048,5.44e-12,427;CL:0000192,8.94e-12,43;CL:0000514,8.94e-12,43;CL:0000723,2.14e-11,433;CL:0000034,1.23e-10,441;CL:0000359,1.07e-09,32;CL:0000187,1.41e-09,55;CL:0002334,2.26e-09,12;CL:0000680,1.09e-08,58;CL:0000056,1.09e-08,58;CL:0000355,1.09e-08,58;CL:0000136,4.68e-08,15;CL:0000393,6.75e-08,61;CL:0000211,6.75e-08,61;CL:0002595,9.23e-08,5;CL:0000213,1.72e-07,58;CL:0000215,1.72e-07,58 | |||
|ontology_enrichment_development_v019=CL:0000514;1.12e-08;43 | |||
|ontology_enrichment_disease=DOID:2394!2.02e-07!14 | |ontology_enrichment_disease=DOID:2394!2.02e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;1.27e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,5.53e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0002049!5.16e-18!79;UBERON:0007798!5.16e-18!79;UBERON:0000055!9.00e-15!69;UBERON:0001981!5.43e-14!60;UBERON:0007500!5.43e-14!60;UBERON:0004537!5.43e-14!60;UBERON:0006965!5.43e-14!60;UBERON:0004872!8.17e-14!84;UBERON:0001637!1.09e-13!42;UBERON:0003509!1.09e-13!42;UBERON:0004572!1.09e-13!42;UBERON:0003914!5.73e-12!118;UBERON:0005256!6.56e-12!143;UBERON:0004535!1.49e-11!110;UBERON:0001134!4.76e-11!61;UBERON:0002036!4.76e-11!61;UBERON:0003082!4.76e-11!61;UBERON:0000490!5.30e-11!138;UBERON:0004573!5.48e-11!33;UBERON:0004571!5.48e-11!33;UBERON:0001009!5.79e-11!113;UBERON:0002385!9.18e-11!63;UBERON:0001015!9.18e-11!63;UBERON:0000383!9.18e-11!63;UBERON:0000914!3.38e-10!83;UBERON:0002329!3.38e-10!83;UBERON:0003077!3.38e-10!83;UBERON:0003059!3.38e-10!83;UBERON:0007282!3.38e-10!83;UBERON:0009618!3.38e-10!83;UBERON:0007285!3.38e-10!83;UBERON:0002100!3.58e-10!216;UBERON:0004290!4.67e-10!70;UBERON:0000486!1.40e-09!82;UBERON:0003886!1.28e-07!63;UBERON:0000475!2.33e-07!365;UBERON:0001013!9.19e-07!14 | |ontology_enrichment_uberon=UBERON:0002049!5.16e-18!79;UBERON:0007798!5.16e-18!79;UBERON:0000055!9.00e-15!69;UBERON:0001981!5.43e-14!60;UBERON:0007500!5.43e-14!60;UBERON:0004537!5.43e-14!60;UBERON:0006965!5.43e-14!60;UBERON:0004872!8.17e-14!84;UBERON:0001637!1.09e-13!42;UBERON:0003509!1.09e-13!42;UBERON:0004572!1.09e-13!42;UBERON:0003914!5.73e-12!118;UBERON:0005256!6.56e-12!143;UBERON:0004535!1.49e-11!110;UBERON:0001134!4.76e-11!61;UBERON:0002036!4.76e-11!61;UBERON:0003082!4.76e-11!61;UBERON:0000490!5.30e-11!138;UBERON:0004573!5.48e-11!33;UBERON:0004571!5.48e-11!33;UBERON:0001009!5.79e-11!113;UBERON:0002385!9.18e-11!63;UBERON:0001015!9.18e-11!63;UBERON:0000383!9.18e-11!63;UBERON:0000914!3.38e-10!83;UBERON:0002329!3.38e-10!83;UBERON:0003077!3.38e-10!83;UBERON:0003059!3.38e-10!83;UBERON:0007282!3.38e-10!83;UBERON:0009618!3.38e-10!83;UBERON:0007285!3.38e-10!83;UBERON:0002100!3.58e-10!216;UBERON:0004290!4.67e-10!70;UBERON:0000486!1.40e-09!82;UBERON:0003886!1.28e-07!63;UBERON:0000475!2.33e-07!365;UBERON:0001013!9.19e-07!14 | ||
|ontology_enrichment_uberon_v019=UBERON:0001637;2.66e-13;42!UBERON:0003509;2.66e-13;42!UBERON:0004572;2.66e-13;42!UBERON:0004573;1.72e-12;33!UBERON:0004571;1.72e-12;33!UBERON:0007500;1.97e-08;56!UBERON:0001981;1.97e-08;56!UBERON:0004537;1.97e-08;56!UBERON:0004457;5.41e-08;9!UBERON:0000042;5.41e-08;9!UBERON:0003834;9.91e-08;5!UBERON:0001533;9.91e-08;5!UBERON:0001013;1.33e-07;14!UBERON:0003513;1.71e-07;7!UBERON:0002049;2.02e-07;75!UBERON:0007798;2.02e-07;75!UBERON:0000055;2.47e-07;65!UBERON:0003914;2.66e-07;74!UBERON:0003688;3.92e-07;6!UBERON:0002358;3.92e-07;6!UBERON:0003684;3.92e-07;6!UBERON:0001178;3.92e-07;6!UBERON:0002384;8.10e-07;198 | |||
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| ||
|short_description=p2@LOXL2 | |short_description=p2@LOXL2 | ||
}} | }} |
Latest revision as of 13:54, 17 September 2015
Short description: | p2@LOXL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LOXL2_5end |
Coexpression cluster: | C4744_Smooth_mesenchymal_Osteoblast_Fibroblast_Adipocyte_Olfactory_Chondrocyte |
Association with transcript: | 31bp_to_DQ892685, DQ895929_5end |
EntrezGene: | LOXL2 |
HGNC: | 6666 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 5.67e-15 | 121 |
fibroblast | 2.02e-13 | 76 |
multi fate stem cell | 5.44e-12 | 427 |
smooth muscle cell | 8.94e-12 | 43 |
smooth muscle myoblast | 8.94e-12 | 43 |
somatic stem cell | 2.14e-11 | 433 |
stem cell | 1.23e-10 | 441 |
vascular associated smooth muscle cell | 1.07e-09 | 32 |
muscle cell | 1.41e-09 | 55 |
preadipocyte | 2.26e-09 | 12 |
muscle precursor cell | 1.09e-08 | 58 |
myoblast | 1.09e-08 | 58 |
multi-potent skeletal muscle stem cell | 1.09e-08 | 58 |
fat cell | 4.68e-08 | 15 |
electrically responsive cell | 6.75e-08 | 61 |
electrically active cell | 6.75e-08 | 61 |
smooth muscle cell of the subclavian artery | 9.23e-08 | 5 |
lining cell | 1.72e-07 | 58 |
barrier cell | 1.72e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 5.53e-08 | 14 |