FFCP PHASE1:Hg19::chr8:125577043..125577056,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9788 | |EntrezGene=9788 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20443 | |HGNC=20443 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000522722_5end | |association_with_transcript=0bp_to_ENST00000522722_5end | ||
|cluster_id=chr8:125577043..125577056,- | |||
|coexpression_cluster_id=C18 | |coexpression_cluster_id=C18 | ||
|description=CAGE_peak_10_at_MTSS1_5end | |description=CAGE_peak_10_at_MTSS1_5end | ||
|id=chr8:125577043..125577056,- | |id=chr8:125577043..125577056,- | ||
|ontology_enrichment_celltype=CL:0000542!3.11e-36!53;CL:0000051!3.11e-36!53;CL:0000838!3.64e-35!52;CL:0000791!2.40e-28!18;CL:0000789!2.40e-28!18;CL:0002420!2.40e-28!18;CL:0002419!2.40e-28!18;CL:0000790!2.40e-28!18;CL:0000084!4.13e-25!25;CL:0000827!4.13e-25!25;CL:0002087!1.40e-19!119;CL:0000625!1.85e-18!11;CL:0000037!1.88e-18!172;CL:0000566!1.88e-18!172;CL:0000738!5.32e-18!140;CL:0000988!1.88e-16!182;CL:0002032!3.08e-16!165;CL:0000837!3.08e-16!165;CL:0002031!3.93e-15!124;CL:0000236!1.34e-13!14;CL:0000624!2.36e-10!6;CL:0000945!3.54e-09!24;CL:0000826!3.54e-09!24 | |ontology_enrichment_celltype=CL:0000542!3.11e-36!53;CL:0000051!3.11e-36!53;CL:0000838!3.64e-35!52;CL:0000791!2.40e-28!18;CL:0000789!2.40e-28!18;CL:0002420!2.40e-28!18;CL:0002419!2.40e-28!18;CL:0000790!2.40e-28!18;CL:0000084!4.13e-25!25;CL:0000827!4.13e-25!25;CL:0002087!1.40e-19!119;CL:0000625!1.85e-18!11;CL:0000037!1.88e-18!172;CL:0000566!1.88e-18!172;CL:0000738!5.32e-18!140;CL:0000988!1.88e-16!182;CL:0002032!3.08e-16!165;CL:0000837!3.08e-16!165;CL:0002031!3.93e-15!124;CL:0000236!1.34e-13!14;CL:0000624!2.36e-10!6;CL:0000945!3.54e-09!24;CL:0000826!3.54e-09!24 | ||
|ontology_enrichment_celltype_v019=CL:0000791;1.49e-42;18!CL:0000789;1.49e-42;18!CL:0002419;1.49e-42;18!CL:0000084;4.11e-33;25!CL:0000625;1.51e-28;11!CL:0000542;8.20e-24;53!CL:0000624;2.22e-18;6!CL:0000236;5.91e-13;13!CL:0000898;3.29e-10;3!CL:0000623;8.41e-10;3!CL:0000226;1.71e-09;3!CL:0000842;1.71e-09;3!CL:0002087;4.26e-08;104!CL:0000815;3.92e-07;2!CL:0000792;3.92e-07;2!CL:0002677;3.92e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.73e-42,18;CL:0000789,1.73e-42,18;CL:0002420,1.73e-42,18;CL:0002419,1.73e-42,18;CL:0000790,1.73e-42,18;CL:0000838,2.75e-39,52;CL:0000542,2.12e-38,53;CL:0000051,2.12e-38,53;CL:0000084,4.36e-33,25;CL:0000827,4.36e-33,25;CL:0000625,1.57e-28,11;CL:0002087,1.13e-18,115;CL:0000624,2.51e-18,6;CL:0000738,6.44e-17,136;CL:0002031,9.38e-14,120;CL:0000037,4.47e-13,168;CL:0000988,5.53e-12,177;CL:0000236,8.03e-12,14;CL:0000898,3.67e-10,3;CL:0002032,3.95e-10,161;CL:0000837,3.95e-10,161;CL:0000623,7.93e-10,3;CL:0000825,7.93e-10,3;CL:0000226,1.25e-09,3;CL:0000842,1.25e-09,3;CL:0000815,4.37e-07,2;CL:0000792,4.37e-07,2;CL:0002677,4.37e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000790;1.49e-42;18!CL:0000051;8.20e-24;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!3.63e-14!15;UBERON:0000179!3.63e-14!15;UBERON:0000463!3.63e-14!15;UBERON:0004177!8.96e-08!7;UBERON:0002370!6.05e-07!4;UBERON:0005058!6.05e-07!4;UBERON:0009113!6.05e-07!4;UBERON:0003295!6.05e-07!4;UBERON:0005562!6.05e-07!4 | |ontology_enrichment_uberon=UBERON:0000178!3.63e-14!15;UBERON:0000179!3.63e-14!15;UBERON:0000463!3.63e-14!15;UBERON:0004177!8.96e-08!7;UBERON:0002370!6.05e-07!4;UBERON:0005058!6.05e-07!4;UBERON:0009113!6.05e-07!4;UBERON:0003295!6.05e-07!4;UBERON:0005562!6.05e-07!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.31e-22;15!UBERON:0000179;1.31e-22;15!UBERON:0000463;1.31e-22;15!UBERON:0002390;4.28e-10;32!UBERON:0002193;2.18e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,8.42e-23,15;UBERON:0000179,8.42e-23,15;UBERON:0000463,8.42e-23,15 | |||
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| ||
|short_description=p10@MTSS1 | |short_description=p10@MTSS1 | ||
}} | }} |
Latest revision as of 01:51, 16 September 2015
Short description: | p10@MTSS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_MTSS1_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | 0bp_to_ENST00000522722_5end |
EntrezGene: | MTSS1 |
HGNC: | 20443 |
UniProt: | NA |
Genome view: | ZENBU |
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CAGE Expression
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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.73e-42 | 18 |
alpha-beta T cell | 1.73e-42 | 18 |
immature T cell | 1.73e-42 | 18 |
mature T cell | 1.73e-42 | 18 |
immature alpha-beta T cell | 1.73e-42 | 18 |
lymphoid lineage restricted progenitor cell | 2.75e-39 | 52 |
lymphocyte | 2.12e-38 | 53 |
common lymphoid progenitor | 2.12e-38 | 53 |
T cell | 4.36e-33 | 25 |
pro-T cell | 4.36e-33 | 25 |
CD8-positive, alpha-beta T cell | 1.57e-28 | 11 |
nongranular leukocyte | 1.13e-18 | 115 |
CD4-positive, alpha-beta T cell | 2.51e-18 | 6 |
leukocyte | 6.44e-17 | 136 |
hematopoietic lineage restricted progenitor cell | 9.38e-14 | 120 |
hematopoietic stem cell | 4.47e-13 | 168 |
hematopoietic cell | 5.53e-12 | 177 |
B cell | 8.03e-12 | 14 |
naive T cell | 3.67e-10 | 3 |
hematopoietic oligopotent progenitor cell | 3.95e-10 | 161 |
hematopoietic multipotent progenitor cell | 3.95e-10 | 161 |
natural killer cell | 7.93e-10 | 3 |
pro-NK cell | 7.93e-10 | 3 |
single nucleate cell | 1.25e-09 | 3 |
mononuclear cell | 1.25e-09 | 3 |
regulatory T cell | 4.37e-07 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 4.37e-07 | 2 |
naive regulatory T cell | 4.37e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 8.42e-23 | 15 |
haemolymphatic fluid | 8.42e-23 | 15 |
organism substance | 8.42e-23 | 15 |