FFCP PHASE1:Hg19::chr8:122157279..122157284,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:122157279..122157284,- | |||
|coexpression_cluster_id=C330 | |coexpression_cluster_id=C330 | ||
|description=CAGE_peak_at_chr8:122157279..122157284,- | |description=CAGE_peak_at_chr8:122157279..122157284,- | ||
|id=chr8:122157279..122157284,- | |id=chr8:122157279..122157284,- | ||
|ontology_enrichment_celltype=CL:0000128!9.02e-12!7;CL:0000126!9.02e-12!7;CL:0000127!9.02e-12!7;CL:0002453!9.02e-12!7;CL:0002602!9.08e-12!2;CL:0000243!3.98e-10!15;CL:0000125!3.98e-10!15;CL:0000030!3.98e-10!15;CL:0000339!3.98e-10!15;CL:0000095!5.35e-09!17;CL:0000123!5.35e-09!17;CL:0002603!1.69e-07!3 | |ontology_enrichment_celltype=CL:0000128!9.02e-12!7;CL:0000126!9.02e-12!7;CL:0000127!9.02e-12!7;CL:0002453!9.02e-12!7;CL:0002602!9.08e-12!2;CL:0000243!3.98e-10!15;CL:0000125!3.98e-10!15;CL:0000030!3.98e-10!15;CL:0000339!3.98e-10!15;CL:0000095!5.35e-09!17;CL:0000123!5.35e-09!17;CL:0002603!1.69e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000322;4.27e-34;3!CL:0002202;2.19e-12;9!CL:0002632;2.19e-12;9!CL:0002368;5.28e-09;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000322,4.27e-34,3;CL:0002202,2.19e-12,9;CL:0002632,2.19e-12,9;CL:0002368,5.28e-09,13 | |||
|ontology_enrichment_development_v019=UBERON:0000358;2.55e-98;1 | |||
|ontology_enrichment_disease=DOID:305!1.23e-08!106;DOID:0050687!2.15e-07!143 | |ontology_enrichment_disease=DOID:305!1.23e-08!106;DOID:0050687!2.15e-07!143 | ||
|ontology_enrichment_disease_v019=DOID:3910;2.74e-50;2!DOID:3908;4.21e-21;5!DOID:1325;1.65e-15;7!DOID:3904;1.65e-15;7!DOID:3905;2.19e-12;9!DOID:1324;5.55e-08;15!DOID:0050615;1.45e-07;16 | |||
|ontology_enrichment_disease_v019_2=DOID:3910,2.74e-50,2;DOID:3908,4.21e-21,5;DOID:1325,1.65e-15,7;DOID:3904,1.65e-15,7;DOID:3905,2.19e-12,9;DOID:1324,5.55e-08,15;DOID:0050615,1.45e-07,16 | |||
|ontology_enrichment_uberon=UBERON:0009568!9.08e-12!2;UBERON:0002216!9.08e-12!2;UBERON:0002209!9.08e-12!2;UBERON:0002213!9.08e-12!2;UBERON:0004267!9.08e-12!2;UBERON:0006444!9.08e-12!2;UBERON:0001995!9.08e-12!2;UBERON:0004715!9.08e-12!2;UBERON:0001468!9.08e-12!2;UBERON:0001130!9.08e-12!2;UBERON:0001066!9.08e-12!2;UBERON:0002418!4.06e-08!3;UBERON:0004755!4.06e-08!3 | |ontology_enrichment_uberon=UBERON:0009568!9.08e-12!2;UBERON:0002216!9.08e-12!2;UBERON:0002209!9.08e-12!2;UBERON:0002213!9.08e-12!2;UBERON:0004267!9.08e-12!2;UBERON:0006444!9.08e-12!2;UBERON:0001995!9.08e-12!2;UBERON:0004715!9.08e-12!2;UBERON:0001468!9.08e-12!2;UBERON:0001130!9.08e-12!2;UBERON:0001066!9.08e-12!2;UBERON:0002418!4.06e-08!3;UBERON:0004755!4.06e-08!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0004903;2.74e-50;2!UBERON:0002173;2.74e-50;2!UBERON:0002186;2.74e-50;2!UBERON:0004821;4.27e-34;3!UBERON:0007499;4.27e-34;3!UBERON:0003215;4.27e-34;3!UBERON:0010368;4.27e-34;3!UBERON:0009911;4.27e-34;3!UBERON:0002299;4.27e-34;3!UBERON:0006524;4.27e-34;3!UBERON:0008874;4.27e-34;3!UBERON:0002169;4.27e-34;3!UBERON:0004894;4.27e-34;3!UBERON:0009856;5.56e-26;4!UBERON:0000058;2.73e-11;10!UBERON:0002331;3.02e-11;10!UBERON:0007196;5.55e-08;15!UBERON:0001558;5.55e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,2.74e-50,2;UBERON:0002173,2.74e-50,2;UBERON:0002186,2.74e-50,2;UBERON:0004821,4.27e-34,3;UBERON:0003215,4.27e-34,3;UBERON:0010368,4.27e-34,3;UBERON:0009911,4.27e-34,3;UBERON:0002299,4.27e-34,3;UBERON:0006524,4.27e-34,3;UBERON:0008874,4.27e-34,3;UBERON:0002169,4.27e-34,3;UBERON:0004894,4.27e-34,3;UBERON:0002331,3.02e-11,10;UBERON:0000358,3.02e-11,10;UBERON:0000307,3.02e-11,10;UBERON:0000091,3.02e-11,10;UBERON:0000087,3.02e-11,10;UBERON:0007010,3.02e-11,10;UBERON:0007806,3.02e-11,10;UBERON:0008780,3.02e-11,10;UBERON:0005728,3.02e-11,10;UBERON:0007196,5.55e-08,15;UBERON:0001558,5.55e-08,15 | |||
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|short_description=p@chr8:122157279..122157284,- | |short_description=p@chr8:122157279..122157284,- | ||
}} | }} |
Latest revision as of 14:29, 31 July 2015
Short description: | p@chr8:122157279..122157284, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:122157279..122157284, - |
Coexpression cluster: | C330_bronchioalveolar_oral_signet_embryonic_lymphangiectasia_testis_adult |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pneumocyte | 4.27e-34 | 3 |
epithelial cell of tracheobronchial tree | 2.19e-12 | 9 |
epithelial cell of lower respiratory tract | 2.19e-12 | 9 |
respiratory epithelial cell | 5.28e-09 | 13 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 2.74e-50 | 2 |
alveolar duct | 2.74e-50 | 2 |
bronchiole | 2.74e-50 | 2 |
pulmonary alveolus epithelium | 4.27e-34 | 3 |
alveolus | 4.27e-34 | 3 |
pulmonary lobule | 4.27e-34 | 3 |
lobule | 4.27e-34 | 3 |
alveolus of lung | 4.27e-34 | 3 |
alveolar system | 4.27e-34 | 3 |
pulmonary acinus | 4.27e-34 | 3 |
alveolar sac | 4.27e-34 | 3 |
alveolar wall | 4.27e-34 | 3 |
umbilical cord | 3.02e-11 | 10 |
blastocyst | 3.02e-11 | 10 |
blastula | 3.02e-11 | 10 |
bilaminar disc | 3.02e-11 | 10 |
inner cell mass | 3.02e-11 | 10 |
cleaving embryo | 3.02e-11 | 10 |
connecting stalk | 3.02e-11 | 10 |
inner cell mass derived epiblast | 3.02e-11 | 10 |
extraembryonic mesoderm | 3.02e-11 | 10 |
tracheobronchial tree | 5.55e-08 | 15 |
lower respiratory tract | 5.55e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 2.74e-50 | 2 |
non-small cell lung carcinoma | 4.21e-21 | 5 |
bronchus cancer | 1.65e-15 | 7 |
bronchogenic carcinoma | 1.65e-15 | 7 |
lung carcinoma | 2.19e-12 | 9 |
lung cancer | 5.55e-08 | 15 |
respiratory system cancer | 1.45e-07 | 16 |