FFCP PHASE1:Hg19::chr19:45926739..45926832,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:45926739..45926832,-
|short_description=p2@ERCC1
|description=CAGE_peak_2_at_ERCC1_5end
|association_with_transcript=0bp_to_ENST00000013807,NM_202001,uc00...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2067 | |EntrezGene=2067 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3433 | |HGNC=3433 | ||
|TSSclassifier=strong | |||
|UniProt=Q7Z7F5,B2RC01 | |UniProt=Q7Z7F5,B2RC01 | ||
|association_with_transcript=0bp_to_ENST00000013807,NM_202001,uc002pbv.2_5end | |||
|cluster_id=chr19:45926739..45926832,- | |||
|description=CAGE_peak_2_at_ERCC1_5end | |||
|id=chr19:45926739..45926832,- | |||
|ontology_enrichment_celltype=CL:0002321!2.69e-27!248;CL:0000220!2.73e-27!246;CL:0000222!1.15e-20!119;CL:0000055!5.40e-20!180;CL:0000548!5.46e-19!679;CL:0000004!5.46e-19!679;CL:0000255!5.46e-19!679;CL:0002371!1.46e-18!591;CL:0000012!4.94e-18!682;CL:0000144!7.24e-17!625;CL:0000183!1.24e-16!59;CL:0000680!2.38e-16!57;CL:0000056!2.38e-16!57;CL:0000355!2.38e-16!57;CL:0000187!4.61e-15!54;CL:0000066!6.60e-14!254;CL:0000192!7.29e-13!42;CL:0000514!7.29e-13!42;CL:0000393!1.27e-12!60;CL:0000211!1.27e-12!60;CL:0000057!7.48e-11!75;CL:0000359!2.04e-10!32;CL:0000003!2.77e-10!722;CL:0000115!6.48e-08!35;CL:0002368!1.77e-07!13;CL:0002076!4.97e-07!43;CL:0002078!5.47e-07!44;CL:0000076!6.52e-07!62 | |||
|ontology_enrichment_celltype_v019=CL:0000359;5.48e-10;32!CL:0000192;4.22e-09;43!CL:0000187;1.06e-08;55!CL:0002368;1.74e-07;13!CL:0000115;4.98e-07;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,2.17e-27,250;CL:0000222,1.26e-20,121;CL:0000680,6.71e-16,58;CL:0000056,6.71e-16,58;CL:0000355,6.71e-16,58;CL:0000187,1.26e-14,55;CL:0000066,4.92e-14,253;CL:0000192,2.12e-12,43;CL:0000514,2.12e-12,43;CL:0000393,2.84e-12,61;CL:0000211,2.84e-12,61;CL:0000057,9.44e-11,76;CL:0000359,2.04e-10,32;CL:0000115,3.72e-08,36;CL:0002368,1.77e-07,13;CL:0002078,3.24e-07,45;CL:0000076,4.62e-07,63;CL:0002076,7.40e-07,42;CL:0002077,7.72e-07,34 | |||
|ontology_enrichment_development_v019=CL:0000514;4.22e-09;43!CL:0000355;1.05e-08;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!4.66e-22!83;UBERON:0002329!4.66e-22!83;UBERON:0003077!4.66e-22!83;UBERON:0003059!4.66e-22!83;UBERON:0007282!4.66e-22!83;UBERON:0009618!4.66e-22!83;UBERON:0007285!4.66e-22!83;UBERON:0000119!2.90e-21!312;UBERON:0000483!1.80e-20!309;UBERON:0000486!4.06e-20!82;UBERON:0005256!4.30e-19!143;UBERON:0004290!3.05e-18!70;UBERON:0000475!3.34e-17!365;UBERON:0002100!3.45e-17!216;UBERON:0002049!4.22e-17!79;UBERON:0007798!4.22e-17!79;UBERON:0000481!2.52e-16!347;UBERON:0000468!7.15e-16!659;UBERON:0000467!7.42e-15!625;UBERON:0000480!8.31e-15!626;UBERON:0000490!9.28e-15!138;UBERON:0001134!2.13e-14!61;UBERON:0002036!2.13e-14!61;UBERON:0003082!2.13e-14!61;UBERON:0000055!2.93e-14!69;UBERON:0003914!4.17e-14!118;UBERON:0001981!1.39e-13!60;UBERON:0007500!1.39e-13!60;UBERON:0004537!1.39e-13!60;UBERON:0006965!1.39e-13!60;UBERON:0000922!2.35e-13!612;UBERON:0000923!2.41e-13!604;UBERON:0005291!2.41e-13!604;UBERON:0006598!2.41e-13!604;UBERON:0002532!2.41e-13!604;UBERON:0002385!2.81e-13!63;UBERON:0001015!2.81e-13!63;UBERON:0000383!2.81e-13!63;UBERON:0003104!3.39e-13!238;UBERON:0009142!3.39e-13!238;UBERON:0002050!4.01e-13!605;UBERON:0005423!4.01e-13!605;UBERON:0004872!9.83e-13!84;UBERON:0001637!1.38e-12!42;UBERON:0003509!1.38e-12!42;UBERON:0004572!1.38e-12!42;UBERON:0001009!1.90e-12!113;UBERON:0004535!5.38e-12!110;UBERON:0003102!2.72e-10!95;UBERON:0000477!3.46e-10!286;UBERON:0004111!5.65e-10!241;UBERON:0000926!6.57e-10!448;UBERON:0004120!6.57e-10!448;UBERON:0006603!6.57e-10!448;UBERON:0004573!1.20e-09!33;UBERON:0004571!1.20e-09!33;UBERON:0001444!3.81e-08!48;UBERON:0000487!2.71e-07!22;UBERON:0005085!3.31e-07!29;UBERON:0000025!9.46e-07!194 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;3.89e-09;42!UBERON:0003509;3.89e-09;42!UBERON:0004572;3.89e-09;42!UBERON:0004573;8.85e-09;33!UBERON:0004571;8.85e-09;33!UBERON:0003914;9.79e-09;74!UBERON:0007500;1.34e-08;56!UBERON:0001981;1.34e-08;56!UBERON:0004537;1.34e-08;56!UBERON:0002049;1.07e-07;75!UBERON:0007798;1.07e-07;75!UBERON:0000487;2.54e-07;22!UBERON:0000055;4.08e-07;65!UBERON:0000490;6.71e-07;33 | |||
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| ||
|short_description=p2@ERCC1 | |||
}} | }} |
Latest revision as of 17:08, 18 September 2015
Short description: | p2@ERCC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ERCC1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000013807, NM_202001, uc002pbv.2_5end |
EntrezGene: | ERCC1 |
HGNC: | 3433 |
UniProt: | Q7Z7F5B2RC01 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 2.17e-27 | 250 |
mesodermal cell | 1.26e-20 | 121 |
muscle precursor cell | 6.71e-16 | 58 |
myoblast | 6.71e-16 | 58 |
multi-potent skeletal muscle stem cell | 6.71e-16 | 58 |
muscle cell | 1.26e-14 | 55 |
epithelial cell | 4.92e-14 | 253 |
smooth muscle cell | 2.12e-12 | 43 |
smooth muscle myoblast | 2.12e-12 | 43 |
electrically responsive cell | 2.84e-12 | 61 |
electrically active cell | 2.84e-12 | 61 |
fibroblast | 9.44e-11 | 76 |
vascular associated smooth muscle cell | 2.04e-10 | 32 |
endothelial cell | 3.72e-08 | 36 |
respiratory epithelial cell | 1.77e-07 | 13 |
meso-epithelial cell | 3.24e-07 | 45 |
squamous epithelial cell | 4.62e-07 | 63 |
endo-epithelial cell | 7.40e-07 | 42 |
ecto-epithelial cell | 7.72e-07 | 34 |